RNA–Protein interactions for RNA: ENST00000419472.1

VPS13A-207, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 1 (best)

Gene VPS13A, Length 2,781 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-207ENST00000419472 NMNAT1Q9HAN9 279 aaPredicted RBP4.1□□□□□ -1.75
VPS13A-207ENST00000419472 COMMD3Q9UBI1 195 aa4.1□□□□□ -1.75
VPS13A-207ENST00000419472 RPS6KB2Q9UBS0 482 aa4.1□□□□□ -1.75
VPS13A-207ENST00000419472 ZNF225Q9UK10 706 aa4.1□□□□□ -1.75
VPS13A-207ENST00000419472 CLEC4EQ9ULY5 219 aa4.1□□□□□ -1.75
VPS13A-207ENST00000419472 PTPRDP23468 1912 aa4.1□□□□□ -1.75
VPS13A-207ENST00000419472 GREB1Q4ZG55 1949 aa4.1□□□□□ -1.75
VPS13A-207ENST00000419472 PATJQ8NI35 1801 aa4.1□□□□□ -1.75
VPS13A-207ENST00000419472 ZNF593O00488 134 aaPredicted RBP4.1□□□□□ -1.75
VPS13A-207ENST00000419472 CCL16O15467 120 aa4.1□□□□□ -1.75
VPS13A-207ENST00000419472 CLDN11O75508 207 aa4.1□□□□□ -1.75
VPS13A-207ENST00000419472 SLC35E2BP0CK96 405 aa4.1□□□□□ -1.75
VPS13A-207ENST00000419472 PIPP12273 146 aaPredicted RBP4.1□□□□□ -1.75
VPS13A-207ENST00000419472 PVRP15151 417 aa4.1□□□□□ -1.75
VPS13A-207ENST00000419472 LINC01547P58512 204 aaPredicted RBP4.1□□□□□ -1.75
VPS13A-207ENST00000419472 TAS2R39P59534 338 aa4.1□□□□□ -1.75
VPS13A-207ENST00000419472 SLC36A2Q495M3 483 aa4.1□□□□□ -1.75
VPS13A-207ENST00000419472 EOGTQ5NDL2 527 aa4.1□□□□□ -1.75
VPS13A-207ENST00000419472 TMEM150AQ86TG1 271 aa4.1□□□□□ -1.75
VPS13A-207ENST00000419472 PIANPQ8IYJ0 282 aa4.1□□□□□ -1.75
VPS13A-207ENST00000419472 UMODL1-AS1Q8N2C9 162 aa4.1□□□□□ -1.75
VPS13A-207ENST00000419472 ZNF614Q8N883 585 aa4.1□□□□□ -1.75
VPS13A-207ENST00000419472 ACBD4Q8NC06 268 aa4.1□□□□□ -1.75
VPS13A-207ENST00000419472 OR8J3Q8NGG0 315 aa4.1□□□□□ -1.75
VPS13A-207ENST00000419472 NPRL2Q8WTW4 380 aa4.1□□□□□ -1.75
VPS13A-207ENST00000419472 ELSPBP1Q96BH3 223 aa4.1□□□□□ -1.75
VPS13A-207ENST00000419472 GPR22Q99680 433 aa4.1□□□□□ -1.75
VPS13A-207ENST00000419472 GINS4Q9BRT9 223 aa4.1□□□□□ -1.75
VPS13A-207ENST00000419472 CLEC7AQ9BXN2 247 aa4.1□□□□□ -1.75
VPS13A-207ENST00000419472 AMBNQ9NP70 447 aa4.1□□□□□ -1.75
VPS13A-207ENST00000419472 ZNF226Q9NYT6 803 aa4.1□□□□□ -1.75
VPS13A-207ENST00000419472 ZFC3H1O60293 1989 aaKnown RBP4.1□□□□□ -1.75
VPS13A-207ENST00000419472 RIF1Q5UIP0 2472 aaKnown RBP4.09□□□□□ -1.75
VPS13A-207ENST00000419472 A0A087WUJ7 227 aa4.09□□□□□ -1.75
VPS13A-207ENST00000419472 SLC5A10A0PJK1 596 aa4.09□□□□□ -1.75
VPS13A-207ENST00000419472 PSMB11A5LHX3 300 aa4.09□□□□□ -1.75
VPS13A-207ENST00000419472 TVP23AA6NH52 213 aa4.09□□□□□ -1.75
VPS13A-207ENST00000419472 UBFD1O14562 309 aaKnown RBP4.09□□□□□ -1.75
VPS13A-207ENST00000419472 TCF21O43680 179 aa4.09□□□□□ -1.75
VPS13A-207ENST00000419472 TBL1XO60907 577 aa4.09□□□□□ -1.75
VPS13A-207ENST00000419472 C8GP07360 202 aa4.09□□□□□ -1.75
VPS13A-207ENST00000419472 RHOCP08134 193 aa4.09□□□□□ -1.75
VPS13A-207ENST00000419472 FGF7P21781 194 aa4.09□□□□□ -1.75
VPS13A-207ENST00000419472 GLP1RP43220 463 aa4.09□□□□□ -1.75
VPS13A-207ENST00000419472 ZNF140P52738 457 aaPredicted RBP4.09□□□□□ -1.75
VPS13A-207ENST00000419472 REEP5Q00765 189 aa4.09□□□□□ -1.75
VPS13A-207ENST00000419472 NSUN5P1Q3KNT7 163 aa4.09□□□□□ -1.75
VPS13A-207ENST00000419472 LEMD1Q68G75 181 aa4.09□□□□□ -1.75
VPS13A-207ENST00000419472 ADNP2Q6IQ32 1131 aa4.09□□□□□ -1.75
VPS13A-207ENST00000419472 C6orf120Q7Z4R8 191 aa4.09□□□□□ -1.75
VPS13A-207ENST00000419472 LGALS14Q8TCE9 139 aa4.09□□□□□ -1.75
VPS13A-207ENST00000419472 IL1F10Q8WWZ1 152 aa4.09□□□□□ -1.75
VPS13A-207ENST00000419472 IMP4Q96G21 291 aaKnown RBP4.09□□□□□ -1.75
VPS13A-207ENST00000419472 PYURFQ96I23 114 aa4.09□□□□□ -1.75
VPS13A-207ENST00000419472 SMIM8Q96KF7 97 aa4.09□□□□□ -1.75
VPS13A-207ENST00000419472 KCTD7Q96MP8 289 aa4.09□□□□□ -1.75
VPS13A-207ENST00000419472 ZNF426Q9BUY5 554 aa4.09□□□□□ -1.75
VPS13A-207ENST00000419472 PATZ1Q9HBE1 687 aaKnown RBP4.09□□□□□ -1.75
VPS13A-207ENST00000419472 UQCC1Q9NVA1 299 aa4.09□□□□□ -1.75
VPS13A-207ENST00000419472 CALML5Q9NZT1 146 aa4.09□□□□□ -1.75
VPS13A-207ENST00000419472 CD84Q9UIB8 345 aa4.09□□□□□ -1.75
VPS13A-207ENST00000419472 CCL26Q9Y258 94 aa4.09□□□□□ -1.75
VPS13A-207ENST00000419472 NYNRINQ9P2P1 1898 aaKnown RBP4.09□□□□□ -1.75
VPS13A-207ENST00000419472 ATG2BQ96BY7 2078 aa4.09□□□□□ -1.75
VPS13A-207ENST00000419472 ANKRD17O75179 2603 aaKnown RBP4.09□□□□□ -1.75
VPS13A-207ENST00000419472 HELZP42694 1942 aaKnown RBP4.09□□□□□ -1.75
VPS13A-207ENST00000419472 FGF16O43320 207 aa4.09□□□□□ -1.75
VPS13A-207ENST00000419472 AHSA1O95433 338 aa4.09□□□□□ -1.75
VPS13A-207ENST00000419472 IFNA6P05013 189 aa4.09□□□□□ -1.75
VPS13A-207ENST00000419472 DTYMKP23919 212 aa4.09□□□□□ -1.75
VPS13A-207ENST00000419472 CAPZBP47756 277 aa4.09□□□□□ -1.75
VPS13A-207ENST00000419472 OR1D4P47884 311 aa4.09□□□□□ -1.75
VPS13A-207ENST00000419472 DSCR9P59020 149 aa4.09□□□□□ -1.75
VPS13A-207ENST00000419472 MLLT11Q13015 90 aaPredicted RBP4.09□□□□□ -1.75
VPS13A-207ENST00000419472 GNMTQ14749 295 aa4.09□□□□□ -1.75
VPS13A-207ENST00000419472 OR2T5Q6IEZ7 315 aa4.09□□□□□ -1.75
VPS13A-207ENST00000419472 ZNF613Q6PF04 617 aa4.09□□□□□ -1.75
VPS13A-207ENST00000419472 OAFQ86UD1 273 aa4.09□□□□□ -1.75
VPS13A-207ENST00000419472 OR10AD1Q8NGE0 317 aa4.09□□□□□ -1.75
VPS13A-207ENST00000419472 OR2T29Q8NH02 315 aa4.09□□□□□ -1.75
VPS13A-207ENST00000419472 OR52P1PQ8NH57 321 aa4.09□□□□□ -1.75
VPS13A-207ENST00000419472 RPL36ALQ969Q0 106 aaKnown RBP4.09□□□□□ -1.75
VPS13A-207ENST00000419472 SLC25A38Q96DW6 304 aa4.09□□□□□ -1.75
VPS13A-207ENST00000419472 ZNF382Q96SR6 550 aa4.09□□□□□ -1.75
VPS13A-207ENST00000419472 C1QTNF4Q9BXJ3 329 aa4.09□□□□□ -1.75
VPS13A-207ENST00000419472 CA10Q9NS85 328 aa4.09□□□□□ -1.75
VPS13A-207ENST00000419472 NEUROG3Q9Y4Z2 214 aa4.09□□□□□ -1.75
VPS13A-207ENST00000419472 OBSL1O75147 1896 aa4.09□□□□□ -1.76
VPS13A-207ENST00000419472 IGLV3-10A0A075B6K4 115 aa4.08□□□□□ -1.76
VPS13A-207ENST00000419472 ZNF726A6NNF4 738 aa4.08□□□□□ -1.76
VPS13A-207ENST00000419472 CXCR6O00574 342 aa4.08□□□□□ -1.76
VPS13A-207ENST00000419472 RCBTB2O95199 551 aa4.08□□□□□ -1.76
VPS13A-207ENST00000419472 ACTL6AO96019 429 aa4.08□□□□□ -1.76
VPS13A-207ENST00000419472 CYB5R3P00387 301 aaPredicted RBP4.08□□□□□ -1.76
VPS13A-207ENST00000419472 IGLV3-27P01718 113 aa4.08□□□□□ -1.76
VPS13A-207ENST00000419472 BCHEP06276 602 aa4.08□□□□□ -1.76
VPS13A-207ENST00000419472 GABRR1P24046 479 aa4.08□□□□□ -1.76
VPS13A-207ENST00000419472 IL2RGP31785 369 aa4.08□□□□□ -1.76
VPS13A-207ENST00000419472 IFNGR2P38484 337 aa4.08□□□□□ -1.76
VPS13A-207ENST00000419472 P2RY2P41231 377 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms