RNA–Protein interactions for RNA: ENST00000417285.6

VEGFA-208, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,081 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-208ENST00000417285 MAGEA13PA6NCF6 341 aa20.19■□□□□ 0.82
VEGFA-208ENST00000417285 ANKRD65E5RJM6 399 aa20.19■□□□□ 0.82
VEGFA-208ENST00000417285 AMY1AP04745 511 aa20.19■□□□□ 0.82
VEGFA-208ENST00000417285 AMY2AP04746 511 aa20.19■□□□□ 0.82
VEGFA-208ENST00000417285 CD1AP06126 327 aa20.19■□□□□ 0.82
VEGFA-208ENST00000417285 CELP19835 753 aa20.19■□□□□ 0.82
VEGFA-208ENST00000417285 ATAD3CQ5T2N8 411 aa20.19■□□□□ 0.82
VEGFA-208ENST00000417285 JAGN1Q8N5M9 183 aa20.19■□□□□ 0.82
VEGFA-208ENST00000417285 RFESDQ8TAC1 157 aa20.19■□□□□ 0.82
VEGFA-208ENST00000417285 TOMM40LQ969M1 308 aa20.19■□□□□ 0.82
VEGFA-208ENST00000417285 ZNF581Q9P0T4 197 aa20.19■□□□□ 0.82
VEGFA-208ENST00000417285 ERGIC3Q9Y282 383 aa20.19■□□□□ 0.82
VEGFA-208ENST00000417285 TSSC4Q9Y5U2 329 aaPredicted RBP20.19■□□□□ 0.82
VEGFA-208ENST00000417285 A0A1W2PPK0 400 aa20.18■□□□□ 0.82
VEGFA-208ENST00000417285 TCRBV4S1A1TA0A5B7 111 aa20.18■□□□□ 0.82
VEGFA-208ENST00000417285 TMEM30CPA0ZSE6 113 aa20.18■□□□□ 0.82
VEGFA-208ENST00000417285 SSTR5P35346 364 aa20.18■□□□□ 0.82
VEGFA-208ENST00000417285 LTC4SQ16873 150 aa20.18■□□□□ 0.82
VEGFA-208ENST00000417285 OXLD1Q5BKU9 147 aa20.18■□□□□ 0.82
VEGFA-208ENST00000417285 UTF1Q5T230 341 aa20.18■□□□□ 0.82
VEGFA-208ENST00000417285 CDH26Q8IXH8 852 aa20.18■□□□□ 0.82
VEGFA-208ENST00000417285 NANOGP1Q8N7R0 232 aa20.18■□□□□ 0.82
VEGFA-208ENST00000417285 TFAP2CQ92754 450 aa20.18■□□□□ 0.82
VEGFA-208ENST00000417285 MUL1Q969V5 352 aa20.18■□□□□ 0.82
VEGFA-208ENST00000417285 DERL3Q96Q80 235 aa20.18■□□□□ 0.82
VEGFA-208ENST00000417285 MRPS28Q9Y2Q9 187 aaKnown RBP20.18■□□□□ 0.82
VEGFA-208ENST00000417285 MAPK3P27361 379 aaPredicted RBP20.17■□□□□ 0.82
VEGFA-208ENST00000417285 RAB7AP51149 207 aa20.17■□□□□ 0.82
VEGFA-208ENST00000417285 DOC2BQ14184 412 aa20.17■□□□□ 0.82
VEGFA-208ENST00000417285 OR4X2Q8NGF9 303 aa20.17■□□□□ 0.82
VEGFA-208ENST00000417285 NEK7Q8TDX7 302 aa20.17■□□□□ 0.82
VEGFA-208ENST00000417285 MRPS24Q96EL2 167 aaKnown RBP20.17■□□□□ 0.82
VEGFA-208ENST00000417285 SPACA1Q9HBV2 294 aa20.17■□□□□ 0.82
VEGFA-208ENST00000417285 FKBP14Q9NWM8 211 aa20.17■□□□□ 0.82
VEGFA-208ENST00000417285 TRAV39A0A0B4J263 110 aa20.16■□□□□ 0.82
VEGFA-208ENST00000417285 A0A1W2PP11 408 aa20.16■□□□□ 0.82
VEGFA-208ENST00000417285 MAS1P04201 325 aa20.16■□□□□ 0.82
VEGFA-208ENST00000417285 TCTEX1D4Q5JR98 221 aa20.16■□□□□ 0.82
VEGFA-208ENST00000417285 AWAT2Q6E213 333 aa20.16■□□□□ 0.82
VEGFA-208ENST00000417285 GLIPR1L1Q6UWM5 242 aa20.16■□□□□ 0.82
VEGFA-208ENST00000417285 OR8H3Q8N146 312 aa20.16■□□□□ 0.82
VEGFA-208ENST00000417285 SGCDQ92629 289 aa20.16■□□□□ 0.82
VEGFA-208ENST00000417285 LEAP2Q969E1 77 aa20.16■□□□□ 0.82
VEGFA-208ENST00000417285 MOB4Q9Y3A3 225 aa20.16■□□□□ 0.82
VEGFA-208ENST00000417285 A0A1W2PRX2 142 aa20.15■□□□□ 0.82
VEGFA-208ENST00000417285 IGHV3-7P01780 117 aa20.15■□□□□ 0.82
VEGFA-208ENST00000417285 PF4V1P10720 104 aa20.15■□□□□ 0.82
VEGFA-208ENST00000417285 CD33P20138 364 aa20.15■□□□□ 0.82
VEGFA-208ENST00000417285 GNG10P50151 68 aa20.15■□□□□ 0.82
VEGFA-208ENST00000417285 C9orf152Q5JTZ5 239 aa20.15■□□□□ 0.82
VEGFA-208ENST00000417285 NKAIN3Q8N8D7 197 aa20.15■□□□□ 0.82
VEGFA-208ENST00000417285 OR52M1Q8NGK5 317 aa20.15■□□□□ 0.82
VEGFA-208ENST00000417285 OR10X1Q8NGY0 326 aa20.15■□□□□ 0.82
VEGFA-208ENST00000417285 MND1Q9BWT6 205 aa20.15■□□□□ 0.82
VEGFA-208ENST00000417285 NECAP2Q9NVZ3 263 aa20.15■□□□□ 0.82
VEGFA-208ENST00000417285 CDK1P06493 297 aa20.14■□□□□ 0.81
VEGFA-208ENST00000417285 DRAM1Q8N682 238 aa20.14■□□□□ 0.81
VEGFA-208ENST00000417285 OR56B4Q8NH76 319 aa20.14■□□□□ 0.81
VEGFA-208ENST00000417285 MYDGFQ969H8 173 aa20.14■□□□□ 0.81
VEGFA-208ENST00000417285 MCRIP1C9JLW8 97 aa20.13■□□□□ 0.81
VEGFA-208ENST00000417285 SNRNP70P08621 437 aaKnown RBP20.13■□□□□ 0.81
VEGFA-208ENST00000417285 RNLSQ5VYX0 342 aa20.13■□□□□ 0.81
VEGFA-208ENST00000417285 ZNF497Q6ZNH5 498 aa20.13■□□□□ 0.81
VEGFA-208ENST00000417285 ARL11Q969Q4 196 aa20.13■□□□□ 0.81
VEGFA-208ENST00000417285 RCC2Q9P258 522 aaKnown RBP20.13■□□□□ 0.81
VEGFA-208ENST00000417285 A0A1W2PPI3 338 aa20.12■□□□□ 0.81
VEGFA-208ENST00000417285 AIPO00170 330 aa20.12■□□□□ 0.81
VEGFA-208ENST00000417285 PIN1P1O15428 100 aa20.12■□□□□ 0.81
VEGFA-208ENST00000417285 FGF16O43320 207 aa20.12■□□□□ 0.81
VEGFA-208ENST00000417285 ORC5O43913 435 aa20.12■□□□□ 0.81
VEGFA-208ENST00000417285 PRB2P02812 416 aaPredicted RBP20.12■□□□□ 0.81
VEGFA-208ENST00000417285 GAPDHP04406 335 aaKnown RBP20.12■□□□□ 0.81
VEGFA-208ENST00000417285 HES1Q14469 280 aa20.12■□□□□ 0.81
VEGFA-208ENST00000417285 C6orf141Q5SZD1 244 aa20.12■□□□□ 0.81
VEGFA-208ENST00000417285 C8orf31Q8N9H6 132 aa20.12■□□□□ 0.81
VEGFA-208ENST00000417285 CCDC107Q8WV48 283 aa20.12■□□□□ 0.81
VEGFA-208ENST00000417285 UQCC2Q9BRT2 126 aa20.12■□□□□ 0.81
VEGFA-208ENST00000417285 SCN3BQ9NY72 215 aa20.12■□□□□ 0.81
VEGFA-208ENST00000417285 NKX1-2Q9UD57 310 aaPredicted RBP20.12■□□□□ 0.81
VEGFA-208ENST00000417285 SH2D7A6NKC9 451 aaPredicted RBP20.11■□□□□ 0.81
VEGFA-208ENST00000417285 PTGES3LE9PB15 166 aa20.11■□□□□ 0.81
VEGFA-208ENST00000417285 C15orf65H3BRN8 121 aa20.11■□□□□ 0.81
VEGFA-208ENST00000417285 MT-ND4P03905 459 aa20.11■□□□□ 0.81
VEGFA-208ENST00000417285 TMEM11P17152 192 aa20.11■□□□□ 0.81
VEGFA-208ENST00000417285 Q6ZPA2 131 aa20.11■□□□□ 0.81
VEGFA-208ENST00000417285 MS4A15Q8N5U1 240 aa20.11■□□□□ 0.81
VEGFA-208ENST00000417285 SELENOIQ9C0D9 397 aa20.11■□□□□ 0.81
VEGFA-208ENST00000417285 RAB9BQ9NP90 201 aa20.11■□□□□ 0.81
VEGFA-208ENST00000417285 ETAA1Q9NY74 926 aa20.11■□□□□ 0.81
VEGFA-208ENST00000417285 FAM90A10PA6NDY2 464 aa20.1■□□□□ 0.81
VEGFA-208ENST00000417285 FAM90A7PA6NKC0 464 aa20.1■□□□□ 0.81
VEGFA-208ENST00000417285 FAM90A23PA8MXZ1 464 aa20.1■□□□□ 0.81
VEGFA-208ENST00000417285 SDCBPO00560 298 aaPredicted RBP20.1■□□□□ 0.81
VEGFA-208ENST00000417285 CRTAPO75718 401 aaPredicted RBP20.1■□□□□ 0.81
VEGFA-208ENST00000417285 PF4P02776 101 aa20.1■□□□□ 0.81
VEGFA-208ENST00000417285 MGMTP16455 207 aa20.1■□□□□ 0.81
VEGFA-208ENST00000417285 LOXL3P58215 753 aa20.1■□□□□ 0.81
VEGFA-208ENST00000417285 GABPB1Q06547 395 aaPredicted RBP20.1■□□□□ 0.81
VEGFA-208ENST00000417285 ZNF816Q0VGE8 651 aaPredicted RBP20.1■□□□□ 0.81
VEGFA-208ENST00000417285 RAB12Q6IQ22 244 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms