RNA–Protein interactions for RNA: ENST00000417033.1

MDC1-203, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 916 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-203ENST00000417033 OMGP23515 440 aa6.63□□□□□ -1.35
MDC1-203ENST00000417033 ERP29P30040 261 aaKnown RBP6.63□□□□□ -1.35
MDC1-203ENST00000417033 PRSS3P35030 304 aa6.63□□□□□ -1.35
MDC1-203ENST00000417033 ETV6P41212 452 aa6.63□□□□□ -1.35
MDC1-203ENST00000417033 KCNJ3P48549 501 aa6.63□□□□□ -1.35
MDC1-203ENST00000417033 PAX5Q02548 391 aa6.63□□□□□ -1.35
MDC1-203ENST00000417033 LSAMPQ13449 338 aa6.63□□□□□ -1.35
MDC1-203ENST00000417033 RBM39Q14498 530 aaKnown RBP6.63□□□□□ -1.35
MDC1-203ENST00000417033 GNMTQ14749 295 aa6.63□□□□□ -1.35
MDC1-203ENST00000417033 HERPUD1Q15011 391 aa6.63□□□□□ -1.35
MDC1-203ENST00000417033 FAM189A2Q15884 450 aa6.63□□□□□ -1.35
MDC1-203ENST00000417033 LTC4SQ16873 150 aa6.63□□□□□ -1.35
MDC1-203ENST00000417033 PNLIPRP3Q17RR3 467 aa6.63□□□□□ -1.35
MDC1-203ENST00000417033 PYDC2Q56P42 97 aa6.63□□□□□ -1.35
MDC1-203ENST00000417033 PRAMEF5Q5TYX0 476 aa6.63□□□□□ -1.35
MDC1-203ENST00000417033 OR52W1Q6IF63 320 aa6.63□□□□□ -1.35
MDC1-203ENST00000417033 PYHIN1Q6K0P9 492 aa6.63□□□□□ -1.35
MDC1-203ENST00000417033 ZNF880Q6PDB4 577 aa6.63□□□□□ -1.35
MDC1-203ENST00000417033 CSMD2Q7Z408 3487 aa6.63□□□□□ -1.35
MDC1-203ENST00000417033 C11orf42Q8N5U0 333 aa6.63□□□□□ -1.35
MDC1-203ENST00000417033 LY6G5BQ8NDX9 201 aa6.63□□□□□ -1.35
MDC1-203ENST00000417033 OR5D13Q8NGL4 314 aa6.63□□□□□ -1.35
MDC1-203ENST00000417033 RFESDQ8TAC1 157 aa6.63□□□□□ -1.35
MDC1-203ENST00000417033 C8orf46Q8TAG6 207 aa6.63□□□□□ -1.35
MDC1-203ENST00000417033 GPX8Q8TED1 209 aa6.63□□□□□ -1.35
MDC1-203ENST00000417033 SNAPC3Q92966 411 aa6.63□□□□□ -1.35
MDC1-203ENST00000417033 C1orf159Q96HA4 380 aa6.63□□□□□ -1.35
MDC1-203ENST00000417033 COX4I2Q96KJ9 171 aa6.63□□□□□ -1.35
MDC1-203ENST00000417033 SMR3AQ99954 134 aa6.63□□□□□ -1.35
MDC1-203ENST00000417033 ST6GALNAC5Q9BVH7 336 aa6.63□□□□□ -1.35
MDC1-203ENST00000417033 Q9N2K0 584 aa6.63□□□□□ -1.35
MDC1-203ENST00000417033 MBNL3Q9NUK0 354 aaKnown RBP6.63□□□□□ -1.35
MDC1-203ENST00000417033 CALYQ9NYX4 217 aa6.63□□□□□ -1.35
MDC1-203ENST00000417033 KLK11Q9UBX7 282 aa6.63□□□□□ -1.35
MDC1-203ENST00000417033 TRAPPC2LQ9UL33 140 aa6.63□□□□□ -1.35
MDC1-203ENST00000417033 ANAPC10Q9UM13 185 aa6.63□□□□□ -1.35
MDC1-203ENST00000417033 CREBBPQ92793 2442 aa6.62□□□□□ -1.35
MDC1-203ENST00000417033 CSPG4Q6UVK1 2322 aa6.62□□□□□ -1.35
MDC1-203ENST00000417033 DSCAML1Q8TD84 2053 aa6.62□□□□□ -1.35
MDC1-203ENST00000417033 YLPM1P49750 1951 aaKnown RBP6.62□□□□□ -1.35
MDC1-203ENST00000417033 TRBV23-1A0A0A0MS06 115 aa6.62□□□□□ -1.35
MDC1-203ENST00000417033 TRBV6-6A0A0A6YYG2 114 aa6.62□□□□□ -1.35
MDC1-203ENST00000417033 IGHV3-43A0A0B4J1X8 118 aa6.62□□□□□ -1.35
MDC1-203ENST00000417033 PPIAL4CA0A0B4J2A2 164 aa6.62□□□□□ -1.35
MDC1-203ENST00000417033 hADV38S2A0JD32 116 aa6.62□□□□□ -1.35
MDC1-203ENST00000417033 CA11O75493 328 aa6.62□□□□□ -1.35
MDC1-203ENST00000417033 FOXH1O75593 365 aa6.62□□□□□ -1.35
MDC1-203ENST00000417033 IGHV3-7P01780 117 aa6.62□□□□□ -1.35
MDC1-203ENST00000417033 HBZP02008 142 aa6.62□□□□□ -1.35
MDC1-203ENST00000417033 LPLP06858 475 aa6.62□□□□□ -1.35
MDC1-203ENST00000417033 MSMBP08118 114 aa6.62□□□□□ -1.35
MDC1-203ENST00000417033 GSTT2P0CG29 244 aa6.62□□□□□ -1.35
MDC1-203ENST00000417033 GSTT2BP0CG30 244 aa6.62□□□□□ -1.35
MDC1-203ENST00000417033 PPIAL4GP0DN37 164 aa6.62□□□□□ -1.35
MDC1-203ENST00000417033 IGHV3-43DP0DP04 118 aa6.62□□□□□ -1.35
MDC1-203ENST00000417033 NPY4RP50391 375 aa6.62□□□□□ -1.35
MDC1-203ENST00000417033 ARF6P62330 175 aa6.62□□□□□ -1.35
MDC1-203ENST00000417033 HLA-DRB3P79483 266 aa6.62□□□□□ -1.35
MDC1-203ENST00000417033 KLRD1Q13241 179 aa6.62□□□□□ -1.35
MDC1-203ENST00000417033 HMGN3Q15651 99 aa6.62□□□□□ -1.35
MDC1-203ENST00000417033 BAK1Q16611 211 aa6.62□□□□□ -1.35
MDC1-203ENST00000417033 SPANXN2Q5MJ10 180 aa6.62□□□□□ -1.35
MDC1-203ENST00000417033 ZNF782Q6ZMW2 699 aaPredicted RBP6.62□□□□□ -1.35
MDC1-203ENST00000417033 PRR18Q8N4B5 295 aa6.62□□□□□ -1.35
MDC1-203ENST00000417033 Q8N7P7 452 aa6.62□□□□□ -1.35
MDC1-203ENST00000417033 SMIM4Q8WVI0 70 aa6.62□□□□□ -1.35
MDC1-203ENST00000417033 LEAP2Q969E1 77 aa6.62□□□□□ -1.35
MDC1-203ENST00000417033 TRIM63Q969Q1 353 aa6.62□□□□□ -1.35
MDC1-203ENST00000417033 PARP12Q9H0J9 701 aaKnown RBP6.62□□□□□ -1.35
MDC1-203ENST00000417033 TAF9BQ9HBM6 251 aa6.62□□□□□ -1.35
MDC1-203ENST00000417033 SIRT7Q9NRC8 400 aa6.62□□□□□ -1.35
MDC1-203ENST00000417033 OR1A1Q9P1Q5 309 aa6.62□□□□□ -1.35
MDC1-203ENST00000417033 ZNRD1Q9P1U0 126 aa6.62□□□□□ -1.35
MDC1-203ENST00000417033 ONECUT1Q9UBC0 465 aa6.62□□□□□ -1.35
MDC1-203ENST00000417033 LINC00312Q9Y6C7 94 aa6.62□□□□□ -1.35
MDC1-203ENST00000417033 ABCA1O95477 2261 aa6.62□□□□□ -1.35
MDC1-203ENST00000417033 DOCK11Q5JSL3 2073 aa6.62□□□□□ -1.35
MDC1-203ENST00000417033 WNK2Q9Y3S1 2297 aa6.61□□□□□ -1.35
MDC1-203ENST00000417033 TRGV10A0A0A0MS01 117 aa6.61□□□□□ -1.35
MDC1-203ENST00000417033 B4DSR2 109 aa6.61□□□□□ -1.35
MDC1-203ENST00000417033 H3BUI4 141 aa6.61□□□□□ -1.35
MDC1-203ENST00000417033 GABARAPH6UMI1 98 aa6.61□□□□□ -1.35
MDC1-203ENST00000417033 CTDSPLO15194 276 aa6.61□□□□□ -1.35
MDC1-203ENST00000417033 FABP7O15540 132 aa6.61□□□□□ -1.35
MDC1-203ENST00000417033 GSTZ1O43708 216 aaPredicted RBP6.61□□□□□ -1.35
MDC1-203ENST00000417033 ENSAO43768 121 aaKnown RBP6.61□□□□□ -1.35
MDC1-203ENST00000417033 ZNF728P0DKX0 622 aa6.61□□□□□ -1.35
MDC1-203ENST00000417033 MMP9P14780 707 aa6.61□□□□□ -1.35
MDC1-203ENST00000417033 DTYMKP23919 212 aa6.61□□□□□ -1.35
MDC1-203ENST00000417033 HLA-DMAP28067 261 aa6.61□□□□□ -1.35
MDC1-203ENST00000417033 CD40LGP29965 261 aa6.61□□□□□ -1.35
MDC1-203ENST00000417033 DVL1P1P54792 670 aaPredicted RBP6.61□□□□□ -1.35
MDC1-203ENST00000417033 MEF2CQ06413 473 aaPredicted RBP6.61□□□□□ -1.35
MDC1-203ENST00000417033 CR1LQ2VPA4 569 aa6.61□□□□□ -1.35
MDC1-203ENST00000417033 IGSF11Q5DX21 431 aa6.61□□□□□ -1.35
MDC1-203ENST00000417033 METTL11BQ5VVY1 283 aa6.61□□□□□ -1.35
MDC1-203ENST00000417033 FAAP20Q6NZ36 180 aa6.61□□□□□ -1.35
MDC1-203ENST00000417033 C1orf229Q6ZS94 237 aaPredicted RBP6.61□□□□□ -1.35
MDC1-203ENST00000417033 HOGA1Q86XE5 327 aa6.61□□□□□ -1.35
MDC1-203ENST00000417033 PNKDQ8N490 385 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms