RNA–Protein interactions for RNA: ENST00000416538.5

UBXN4-203, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 1,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-203ENST00000416538 ZNF565Q8N9K5 539 aa11.99□□□□□ -0.49
UBXN4-203ENST00000416538 CAPSLQ8WWF8 208 aa11.99□□□□□ -0.49
UBXN4-203ENST00000416538 CREB3L1Q96BA8 519 aa11.99□□□□□ -0.49
UBXN4-203ENST00000416538 DERL3Q96Q80 235 aa11.99□□□□□ -0.49
UBXN4-203ENST00000416538 FKBP14Q9NWM8 211 aa11.99□□□□□ -0.49
UBXN4-203ENST00000416538 PSORS1C1Q9UIG5 152 aa11.99□□□□□ -0.49
UBXN4-203ENST00000416538 MOB4Q9Y3A3 225 aa11.99□□□□□ -0.49
UBXN4-203ENST00000416538 HSPE1-MOB4S4R3N1 261 aa11.99□□□□□ -0.49
UBXN4-203ENST00000416538 IGHV3-43A0A0B4J1X8 118 aa11.98□□□□□ -0.49
UBXN4-203ENST00000416538 TMEM30CPA0ZSE6 113 aa11.98□□□□□ -0.49
UBXN4-203ENST00000416538 SLC31A2O15432 143 aa11.98□□□□□ -0.49
UBXN4-203ENST00000416538 IGHV3-43DP0DP04 118 aa11.98□□□□□ -0.49
UBXN4-203ENST00000416538 LOXL3P58215 753 aa11.98□□□□□ -0.49
UBXN4-203ENST00000416538 MPV17LQ2QL34 196 aa11.98□□□□□ -0.49
UBXN4-203ENST00000416538 CCDC144NLQ6NUI1 221 aa11.98□□□□□ -0.49
UBXN4-203ENST00000416538 ZNF497Q6ZNH5 498 aa11.98□□□□□ -0.49
UBXN4-203ENST00000416538 Q6ZPA2 131 aa11.98□□□□□ -0.49
UBXN4-203ENST00000416538 C5orf56Q8N8D9 126 aa11.98□□□□□ -0.49
UBXN4-203ENST00000416538 TMEM104Q8NE00 496 aa11.98□□□□□ -0.49
UBXN4-203ENST00000416538 CCDC107Q8WV48 283 aa11.98□□□□□ -0.49
UBXN4-203ENST00000416538 SGCDQ92629 289 aa11.98□□□□□ -0.49
UBXN4-203ENST00000416538 MYDGFQ969H8 173 aa11.98□□□□□ -0.49
UBXN4-203ENST00000416538 PHF21AQ96BD5 680 aa11.98□□□□□ -0.49
UBXN4-203ENST00000416538 AKR1E2Q96JD6 320 aa11.98□□□□□ -0.49
UBXN4-203ENST00000416538 C8orf4Q9NR00 106 aa11.98□□□□□ -0.49
UBXN4-203ENST00000416538 CNOT2Q9NZN8 540 aaKnown RBP11.98□□□□□ -0.49
UBXN4-203ENST00000416538 MRPS28Q9Y2Q9 187 aaKnown RBP11.98□□□□□ -0.49
UBXN4-203ENST00000416538 AMMECR1Q9Y4X0 333 aaPredicted RBP11.98□□□□□ -0.49
UBXN4-203ENST00000416538 CSTBP04080 98 aaKnown RBP11.97□□□□□ -0.49
UBXN4-203ENST00000416538 VHLP40337 213 aa11.97□□□□□ -0.49
UBXN4-203ENST00000416538 MNDAP41218 407 aa11.97□□□□□ -0.49
UBXN4-203ENST00000416538 REG1BP48304 166 aa11.97□□□□□ -0.49
UBXN4-203ENST00000416538 ARHGDIBP52566 201 aa11.97□□□□□ -0.49
UBXN4-203ENST00000416538 GP2P55259 537 aaKnown RBP11.97□□□□□ -0.49
UBXN4-203ENST00000416538 PRR20EP86478 221 aa11.97□□□□□ -0.49
UBXN4-203ENST00000416538 PRR20CP86479 221 aa11.97□□□□□ -0.49
UBXN4-203ENST00000416538 PRR20DP86480 221 aa11.97□□□□□ -0.49
UBXN4-203ENST00000416538 PRR20BP86481 221 aa11.97□□□□□ -0.49
UBXN4-203ENST00000416538 PRR20AP86496 221 aa11.97□□□□□ -0.49
UBXN4-203ENST00000416538 EMX1Q04741 257 aaPredicted RBP11.97□□□□□ -0.49
UBXN4-203ENST00000416538 MADCAM1Q13477 382 aa11.97□□□□□ -0.49
UBXN4-203ENST00000416538 C9orf152Q5JTZ5 239 aa11.97□□□□□ -0.49
UBXN4-203ENST00000416538 ATAD3CQ5T2N8 411 aa11.97□□□□□ -0.49
UBXN4-203ENST00000416538 SIGIRRQ6IA17 410 aa11.97□□□□□ -0.49
UBXN4-203ENST00000416538 GLIPR1L1Q6UWM5 242 aa11.97□□□□□ -0.49
UBXN4-203ENST00000416538 C5orf24Q7Z6I8 188 aa11.97□□□□□ -0.49
UBXN4-203ENST00000416538 LINC00596Q86U02 117 aa11.97□□□□□ -0.49
UBXN4-203ENST00000416538 C8orf59Q8N0T1 100 aaPredicted RBP11.97□□□□□ -0.49
UBXN4-203ENST00000416538 JAGN1Q8N5M9 183 aa11.97□□□□□ -0.49
UBXN4-203ENST00000416538 OR4F17Q8NGA8 305 aa11.97□□□□□ -0.49
UBXN4-203ENST00000416538 OR10A7Q8NGE5 316 aa11.97□□□□□ -0.49
UBXN4-203ENST00000416538 OR4F4Q96R69 305 aa11.97□□□□□ -0.49
UBXN4-203ENST00000416538 BANF2Q9H503 90 aa11.97□□□□□ -0.49
UBXN4-203ENST00000416538 GFOD1Q9NXC2 390 aa11.97□□□□□ -0.49
UBXN4-203ENST00000416538 IGHV3-72A0A0B4J1Y9 119 aa11.96□□□□□ -0.49
UBXN4-203ENST00000416538 EFCAB10A6NFE3 127 aa11.96□□□□□ -0.49
UBXN4-203ENST00000416538 HSD17B6O14756 317 aa11.96□□□□□ -0.49
UBXN4-203ENST00000416538 IGKV1D-33P01593 117 aa11.96□□□□□ -0.49
UBXN4-203ENST00000416538 IGKV1-33P01594 117 aa11.96□□□□□ -0.49
UBXN4-203ENST00000416538 MT-ND4P03905 459 aa11.96□□□□□ -0.49
UBXN4-203ENST00000416538 MAS1P04201 325 aa11.96□□□□□ -0.49
UBXN4-203ENST00000416538 CELP19835 753 aa11.96□□□□□ -0.49
UBXN4-203ENST00000416538 WNT4P56705 351 aa11.96□□□□□ -0.49
UBXN4-203ENST00000416538 FAM27D1Q5T7N8 215 aa11.96□□□□□ -0.49
UBXN4-203ENST00000416538 THNSL2Q86YJ6 484 aa11.96□□□□□ -0.49
UBXN4-203ENST00000416538 GAPTQ8N292 157 aa11.96□□□□□ -0.49
UBXN4-203ENST00000416538 ZNF439Q8NDP4 499 aa11.96□□□□□ -0.49
UBXN4-203ENST00000416538 ARL11Q969Q4 196 aa11.96□□□□□ -0.49
UBXN4-203ENST00000416538 NOL4LQ96MY1 436 aaPredicted RBP11.96□□□□□ -0.49
UBXN4-203ENST00000416538 PLCXD1Q9NUJ7 323 aa11.96□□□□□ -0.49
UBXN4-203ENST00000416538 PAK1IP1Q9NWT1 392 aaPredicted RBP11.96□□□□□ -0.49
UBXN4-203ENST00000416538 IGHV1-3A0A0C4DH29 117 aa11.95□□□□□ -0.5
UBXN4-203ENST00000416538 C12orf77C9JDV5 145 aa11.95□□□□□ -0.5
UBXN4-203ENST00000416538 AIPO00170 330 aa11.95□□□□□ -0.5
UBXN4-203ENST00000416538 SDCBPO00560 298 aaPredicted RBP11.95□□□□□ -0.5
UBXN4-203ENST00000416538 GTF2F2P13984 249 aa11.95□□□□□ -0.5
UBXN4-203ENST00000416538 TMEM11P17152 192 aa11.95□□□□□ -0.5
UBXN4-203ENST00000416538 RAB7AP51149 207 aa11.95□□□□□ -0.5
UBXN4-203ENST00000416538 TAS2R43P59537 309 aa11.95□□□□□ -0.5
UBXN4-203ENST00000416538 ZNF816Q0VGE8 651 aaPredicted RBP11.95□□□□□ -0.5
UBXN4-203ENST00000416538 HNF4GQ14541 408 aa11.95□□□□□ -0.5
UBXN4-203ENST00000416538 AWAT2Q6E213 333 aa11.95□□□□□ -0.5
UBXN4-203ENST00000416538 ETV3LQ6ZN32 361 aa11.95□□□□□ -0.5
UBXN4-203ENST00000416538 C18orf65Q6ZTR6 163 aa11.95□□□□□ -0.5
UBXN4-203ENST00000416538 CENPVQ7Z7K6 275 aaPredicted RBP11.95□□□□□ -0.5
UBXN4-203ENST00000416538 ZNF329Q86UD4 541 aa11.95□□□□□ -0.5
UBXN4-203ENST00000416538 OR8H3Q8N146 312 aa11.95□□□□□ -0.5
UBXN4-203ENST00000416538 Q8N6K4 173 aa11.95□□□□□ -0.5
UBXN4-203ENST00000416538 NANOGP1Q8N7R0 232 aa11.95□□□□□ -0.5
UBXN4-203ENST00000416538 BPIFB6Q8NFQ5 453 aa11.95□□□□□ -0.5
UBXN4-203ENST00000416538 OR10X1Q8NGY0 326 aa11.95□□□□□ -0.5
UBXN4-203ENST00000416538 OR4K15Q8NH41 348 aa11.95□□□□□ -0.5
UBXN4-203ENST00000416538 NEK7Q8TDX7 302 aa11.95□□□□□ -0.5
UBXN4-203ENST00000416538 ST6GALNAC6Q969X2 333 aa11.95□□□□□ -0.5
UBXN4-203ENST00000416538 Q96M66 194 aa11.95□□□□□ -0.5
UBXN4-203ENST00000416538 KCNK15Q9H427 330 aa11.95□□□□□ -0.5
UBXN4-203ENST00000416538 PCDHB16Q9NRJ7 776 aa11.95□□□□□ -0.5
UBXN4-203ENST00000416538 AURKAIP1Q9NWT8 199 aaPredicted RBP11.95□□□□□ -0.5
UBXN4-203ENST00000416538 CHCHD3Q9NX63 227 aaKnown RBP11.95□□□□□ -0.5
UBXN4-203ENST00000416538 CKLFQ9UBR5 152 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 143.8 ms