RNA–Protein interactions for RNA: ENST00000415950.4

SCN1B-202, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SCN1B, Length 4,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-202ENST00000415950 SYNGR2O43760 224 aa11.3□□□□□ -0.6
SCN1B-202ENST00000415950 ASAH2BP0C7U1 165 aa11.3□□□□□ -0.6
SCN1B-202ENST00000415950 ERGP11308 486 aa11.3□□□□□ -0.6
SCN1B-202ENST00000415950 TRAT1Q6PIZ9 186 aa11.3□□□□□ -0.6
SCN1B-202ENST00000415950 SLC36A1Q7Z2H8 476 aa11.3□□□□□ -0.6
SCN1B-202ENST00000415950 TCTEX1D1Q8N7M0 179 aa11.3□□□□□ -0.6
SCN1B-202ENST00000415950 MISP3Q96FF7 219 aa11.3□□□□□ -0.6
SCN1B-202ENST00000415950 SPSB2Q99619 263 aa11.3□□□□□ -0.6
SCN1B-202ENST00000415950 IGKV1D-42A0A075B6H8 117 aa11.3□□□□□ -0.6
SCN1B-202ENST00000415950 H0YL77 283 aa11.3□□□□□ -0.6
SCN1B-202ENST00000415950 BGLAPP02818 100 aa11.3□□□□□ -0.6
SCN1B-202ENST00000415950 SCGB1C2P0DMR2 95 aa11.3□□□□□ -0.6
SCN1B-202ENST00000415950 ZNF260Q3ZCT1 412 aa11.3□□□□□ -0.6
SCN1B-202ENST00000415950 GAPTQ8N292 157 aa11.3□□□□□ -0.6
SCN1B-202ENST00000415950 OR1K1Q8NGR3 316 aa11.3□□□□□ -0.6
SCN1B-202ENST00000415950 GPBAR1Q8TDU6 330 aa11.3□□□□□ -0.6
SCN1B-202ENST00000415950 FANCMQ8IYD8 2048 aa11.29□□□□□ -0.6
SCN1B-202ENST00000415950 LILRA5A6NI73 299 aa11.29□□□□□ -0.6
SCN1B-202ENST00000415950 PRRG2O14669 202 aa11.29□□□□□ -0.6
SCN1B-202ENST00000415950 NEURL1O76050 574 aa11.29□□□□□ -0.6
SCN1B-202ENST00000415950 TNFSF15O95150 251 aa11.29□□□□□ -0.6
SCN1B-202ENST00000415950 TRGC2P03986 189 aa11.29□□□□□ -0.6
SCN1B-202ENST00000415950 ORM2P19652 201 aa11.29□□□□□ -0.6
SCN1B-202ENST00000415950 COL19A1Q14993 1142 aa11.29□□□□□ -0.6
SCN1B-202ENST00000415950 MARVELD3Q96A59 401 aa11.29□□□□□ -0.6
SCN1B-202ENST00000415950 PHF7Q9BWX1 381 aaPredicted RBP11.29□□□□□ -0.6
SCN1B-202ENST00000415950 MTCH2Q9Y6C9 303 aa11.29□□□□□ -0.6
SCN1B-202ENST00000415950 GATCO43716 136 aaKnown RBP11.29□□□□□ -0.6
SCN1B-202ENST00000415950 LYZL6O75951 148 aa11.29□□□□□ -0.6
SCN1B-202ENST00000415950 CTSDP07339 412 aaPredicted RBP11.29□□□□□ -0.6
SCN1B-202ENST00000415950 SMIM6P0DI80 62 aa11.29□□□□□ -0.6
SCN1B-202ENST00000415950 ATP6V0CP27449 155 aa11.29□□□□□ -0.6
SCN1B-202ENST00000415950 HTR1DP28221 377 aa11.29□□□□□ -0.6
SCN1B-202ENST00000415950 P2RY4P51582 365 aa11.29□□□□□ -0.6
SCN1B-202ENST00000415950 GNB2P62879 340 aa11.29□□□□□ -0.6
SCN1B-202ENST00000415950 IZUMO4Q1ZYL8 232 aa11.29□□□□□ -0.6
SCN1B-202ENST00000415950 FAM162BQ5T6X4 162 aa11.29□□□□□ -0.6
SCN1B-202ENST00000415950 FNDC7Q5VTL7 733 aa11.29□□□□□ -0.6
SCN1B-202ENST00000415950 CYB561D1Q8N8Q1 229 aa11.29□□□□□ -0.6
SCN1B-202ENST00000415950 OR13G1Q8NGZ3 307 aa11.29□□□□□ -0.6
SCN1B-202ENST00000415950 WFIKKN1Q96NZ8 548 aa11.29□□□□□ -0.6
SCN1B-202ENST00000415950 MMP16P51512 607 aa11.29□□□□□ -0.6
SCN1B-202ENST00000415950 DEFB109BQ30KR1 87 aa11.29□□□□□ -0.6
SCN1B-202ENST00000415950 C9orf40Q8IXQ3 194 aa11.29□□□□□ -0.6
SCN1B-202ENST00000415950 OR10D3Q8NH80 312 aa11.29□□□□□ -0.6
SCN1B-202ENST00000415950 BOD1Q96IK1 185 aa11.29□□□□□ -0.6
SCN1B-202ENST00000415950 RARRES2Q99969 163 aa11.29□□□□□ -0.6
SCN1B-202ENST00000415950 FSCN3Q9NQT6 498 aa11.29□□□□□ -0.6
SCN1B-202ENST00000415950 IL36GQ9NZH8 169 aa11.29□□□□□ -0.6
SCN1B-202ENST00000415950 WNT16Q9UBV4 365 aa11.29□□□□□ -0.6
SCN1B-202ENST00000415950 PARP14Q460N5 1801 aa11.29□□□□□ -0.6
SCN1B-202ENST00000415950 ANKRD36A6QL64 1941 aa11.29□□□□□ -0.6
SCN1B-202ENST00000415950 MFNGO00587 321 aa11.28□□□□□ -0.6
SCN1B-202ENST00000415950 ZNF83P51522 516 aa11.28□□□□□ -0.6
SCN1B-202ENST00000415950 TCTAP57738 103 aa11.28□□□□□ -0.6
SCN1B-202ENST00000415950 GGTLC2Q14390 218 aa11.28□□□□□ -0.6
SCN1B-202ENST00000415950 ZNF343Q6P1L6 599 aa11.28□□□□□ -0.6
SCN1B-202ENST00000415950 OR10A7Q8NGE5 316 aa11.28□□□□□ -0.6
SCN1B-202ENST00000415950 TAAR9Q96RI9 348 aa11.28□□□□□ -0.6
SCN1B-202ENST00000415950 CHRDL1Q9BU40 450 aa11.28□□□□□ -0.6
SCN1B-202ENST00000415950 RSPO3Q9BXY4 272 aaPredicted RBP11.28□□□□□ -0.6
SCN1B-202ENST00000415950 CLEC5AQ9NY25 188 aa11.28□□□□□ -0.6
SCN1B-202ENST00000415950 RCC2Q9P258 522 aaKnown RBP11.28□□□□□ -0.6
SCN1B-202ENST00000415950 ABCA4P78363 2273 aa11.28□□□□□ -0.6
SCN1B-202ENST00000415950 PMS2P1A4D2B8 440 aa11.28□□□□□ -0.6
SCN1B-202ENST00000415950 C11orf94C9JXX5 98 aa11.28□□□□□ -0.6
SCN1B-202ENST00000415950 KIR2DL1P43626 348 aaPredicted RBP11.28□□□□□ -0.6
SCN1B-202ENST00000415950 ZNF345Q14585 488 aa11.28□□□□□ -0.6
SCN1B-202ENST00000415950 HLA-BQ31612 363 aa11.28□□□□□ -0.6
SCN1B-202ENST00000415950 CYB5R2Q6BCY4 276 aa11.28□□□□□ -0.6
SCN1B-202ENST00000415950 ASB10Q8WXI3 467 aa11.28□□□□□ -0.6
SCN1B-202ENST00000415950 HSD17B10Q99714 261 aaKnown RBP11.28□□□□□ -0.6
SCN1B-202ENST00000415950 TECRQ9NZ01 308 aaKnown RBP11.28□□□□□ -0.6
SCN1B-202ENST00000415950 RALGAPA1Q6GYQ0 2036 aa11.28□□□□□ -0.6
SCN1B-202ENST00000415950 PAGE4O60829 102 aa11.28□□□□□ -0.6
SCN1B-202ENST00000415950 VDAC1P21796 283 aa11.28□□□□□ -0.6
SCN1B-202ENST00000415950 RNF133Q8WVZ7 376 aa11.28□□□□□ -0.6
SCN1B-202ENST00000415950 MRGPRFQ96AM1 343 aa11.28□□□□□ -0.6
SCN1B-202ENST00000415950 TIMD4Q96H15 378 aa11.28□□□□□ -0.6
SCN1B-202ENST00000415950 TMEM204Q9BSN7 226 aa11.28□□□□□ -0.6
SCN1B-202ENST00000415950 SH3BGRL3Q9H299 93 aa11.28□□□□□ -0.6
SCN1B-202ENST00000415950 C5orf66Q9H5L9 145 aa11.28□□□□□ -0.6
SCN1B-202ENST00000415950 A0A1B0GTQ1 180 aa11.28□□□□□ -0.6
SCN1B-202ENST00000415950 SPCS3P61009 180 aa11.28□□□□□ -0.6
SCN1B-202ENST00000415950 EGR4Q05215 589 aa11.28□□□□□ -0.6
SCN1B-202ENST00000415950 OR10G8Q8NGN5 311 aa11.28□□□□□ -0.6
SCN1B-202ENST00000415950 M1APQ8TC57 530 aa11.28□□□□□ -0.6
SCN1B-202ENST00000415950 SLC26A1Q9H2B4 701 aa11.28□□□□□ -0.6
SCN1B-202ENST00000415950 FKBP11Q9NYL4 201 aa11.28□□□□□ -0.6
SCN1B-202ENST00000415950 PDCD11Q14690 1871 aaKnown RBP11.27□□□□□ -0.6
SCN1B-202ENST00000415950 TRAV14DV4A0A0A6YYC5 116 aa11.27□□□□□ -0.6
SCN1B-202ENST00000415950 FBLL1A6NHQ2 334 aaKnown RBP11.27□□□□□ -0.6
SCN1B-202ENST00000415950 PPYP01298 95 aa11.27□□□□□ -0.6
SCN1B-202ENST00000415950 HLA-GP17693 338 aa11.27□□□□□ -0.6
SCN1B-202ENST00000415950 IL24Q13007 206 aa11.27□□□□□ -0.6
SCN1B-202ENST00000415950 FAHD2BQ6P2I3 314 aaPredicted RBP11.27□□□□□ -0.6
SCN1B-202ENST00000415950 FAHD2AQ96GK7 314 aa11.27□□□□□ -0.6
SCN1B-202ENST00000415950 LYRM2Q9NU23 88 aaPredicted RBP11.27□□□□□ -0.6
SCN1B-202ENST00000415950 BET1LQ9NYM9 111 aa11.27□□□□□ -0.6
SCN1B-202ENST00000415950 SCN10AQ9Y5Y9 1956 aa11.27□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms