RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 PLPP4Q5VZY2 271 aa3.01□□□□□ -1.93
SF3B1-203ENST00000414174 FRG2Q64ET8 278 aa3.01□□□□□ -1.93
SF3B1-203ENST00000414174 Q6ZTK2 550 aa3.01□□□□□ -1.93
SF3B1-203ENST00000414174 GTF2H5Q6ZYL4 71 aa3.01□□□□□ -1.93
SF3B1-203ENST00000414174 MOB1BQ7L9L4 216 aa3.01□□□□□ -1.93
SF3B1-203ENST00000414174 HIST3H2BBQ8N257 126 aa3.01□□□□□ -1.93
SF3B1-203ENST00000414174 GBGT1Q8N5D6 347 aa3.01□□□□□ -1.93
SF3B1-203ENST00000414174 TEX45Q8NA69 505 aa3.01□□□□□ -1.93
SF3B1-203ENST00000414174 TMEM229BQ8NBD8 167 aa3.01□□□□□ -1.93
SF3B1-203ENST00000414174 SCCPDHQ8NBX0 429 aa3.01□□□□□ -1.93
SF3B1-203ENST00000414174 ZNF436-AS1Q8NC38 126 aaPredicted RBP3.01□□□□□ -1.93
SF3B1-203ENST00000414174 GPR26Q8NDV2 337 aa3.01□□□□□ -1.93
SF3B1-203ENST00000414174 OR2T12Q8NG77 320 aa3.01□□□□□ -1.93
SF3B1-203ENST00000414174 OR1S1Q8NH92 325 aa3.01□□□□□ -1.93
SF3B1-203ENST00000414174 CD99L2Q8TCZ2 262 aa3.01□□□□□ -1.93
SF3B1-203ENST00000414174 ZNF431Q8TF32 576 aaPredicted RBP3.01□□□□□ -1.93
SF3B1-203ENST00000414174 BLNKQ8WV28 456 aa3.01□□□□□ -1.93
SF3B1-203ENST00000414174 RXFP2Q8WXD0 754 aa3.01□□□□□ -1.93
SF3B1-203ENST00000414174 DLX4Q92988 240 aaPredicted RBP3.01□□□□□ -1.93
SF3B1-203ENST00000414174 TMEM106AQ96A25 262 aa3.01□□□□□ -1.93
SF3B1-203ENST00000414174 ACY3Q96HD9 319 aa3.01□□□□□ -1.93
SF3B1-203ENST00000414174 BMFQ96LC9 184 aa3.01□□□□□ -1.93
SF3B1-203ENST00000414174 UBE2E2Q96LR5 201 aa3.01□□□□□ -1.93
SF3B1-203ENST00000414174 IP6K3Q96PC2 410 aa3.01□□□□□ -1.93
SF3B1-203ENST00000414174 ZNF670Q9BS34 389 aa3.01□□□□□ -1.93
SF3B1-203ENST00000414174 TMEM70Q9BUB7 260 aa3.01□□□□□ -1.93
SF3B1-203ENST00000414174 TMEM59Q9BXS4 323 aa3.01□□□□□ -1.93
SF3B1-203ENST00000414174 HES7Q9BYE0 225 aa3.01□□□□□ -1.93
SF3B1-203ENST00000414174 OR2H1Q9GZK4 316 aa3.01□□□□□ -1.93
SF3B1-203ENST00000414174 COA1Q9GZY4 146 aa3.01□□□□□ -1.93
SF3B1-203ENST00000414174 RAB6CQ9H0N0 254 aa3.01□□□□□ -1.93
SF3B1-203ENST00000414174 RNASE7Q9H1E1 156 aaKnown RBP3.01□□□□□ -1.93
SF3B1-203ENST00000414174 OR52D1Q9H346 318 aa3.01□□□□□ -1.93
SF3B1-203ENST00000414174 REEP1Q9H902 201 aa3.01□□□□□ -1.93
SF3B1-203ENST00000414174 APOBEC3GQ9HC16 384 aaKnown RBP3.01□□□□□ -1.93
SF3B1-203ENST00000414174 SDR39U1Q9NRG7 319 aaPredicted RBP3.01□□□□□ -1.93
SF3B1-203ENST00000414174 RBM22Q9NW64 420 aaKnown RBP eCLIP3.01□□□□□ -1.939e-21■■■■□ 19.5
SF3B1-203ENST00000414174 RNF186Q9NXI6 227 aa3.01□□□□□ -1.93
SF3B1-203ENST00000414174 OARD1Q9Y530 152 aa3.01□□□□□ -1.93
SF3B1-203ENST00000414174 UBIAD1Q9Y5Z9 338 aa3.01□□□□□ -1.93
SF3B1-203ENST00000414174 SLIT3O75094 1523 aa3.01□□□□□ -1.93
SF3B1-203ENST00000414174 PZPP20742 1482 aa3.01□□□□□ -1.93
SF3B1-203ENST00000414174 MYOM2P54296 1465 aa3.01□□□□□ -1.93
SF3B1-203ENST00000414174 PRXQ9BXM0 1461 aa3.01□□□□□ -1.93
SF3B1-203ENST00000414174 WDR81Q562E7 1941 aa3.01□□□□□ -1.93
SF3B1-203ENST00000414174 DISP2A7MBM2 1401 aa3.01□□□□□ -1.93
SF3B1-203ENST00000414174 RIC1Q4ADV7 1423 aa3.01□□□□□ -1.93
SF3B1-203ENST00000414174 ARHGEF17Q96PE2 2063 aaPredicted RBP3□□□□□ -1.93
SF3B1-203ENST00000414174 MYO5BQ9ULV0 1848 aa3□□□□□ -1.93
SF3B1-203ENST00000414174 CDK13Q14004 1512 aaKnown RBP3□□□□□ -1.93
SF3B1-203ENST00000414174 A0A096LPK6 155 aa3□□□□□ -1.93
SF3B1-203ENST00000414174 A0A0G2JMM0 328 aa3□□□□□ -1.93
SF3B1-203ENST00000414174 A0A0U1RQV1 116 aa3□□□□□ -1.93
SF3B1-203ENST00000414174 SPAARA0A1B0GVQ0 90 aa3□□□□□ -1.93
SF3B1-203ENST00000414174 A0A1W2PPB8 328 aa3□□□□□ -1.93
SF3B1-203ENST00000414174 LYRM9A8MSI8 78 aa3□□□□□ -1.93
SF3B1-203ENST00000414174 KIR3DP1A8MWS1 328 aa3□□□□□ -1.93
SF3B1-203ENST00000414174 EEF1E1-BLOC1S5C9J1V9 151 aa3□□□□□ -1.93
SF3B1-203ENST00000414174 H7BYZ3 331 aa3□□□□□ -1.93
SF3B1-203ENST00000414174 RHODO00212 210 aa3□□□□□ -1.93
SF3B1-203ENST00000414174 CDC42EP2O14613 210 aa3□□□□□ -1.93
SF3B1-203ENST00000414174 ARPC2O15144 300 aa3□□□□□ -1.93
SF3B1-203ENST00000414174 EEF1E1O43324 174 aaKnown RBP3□□□□□ -1.93
SF3B1-203ENST00000414174 ZNF207O43670 478 aaKnown RBP3□□□□□ -1.93
SF3B1-203ENST00000414174 ZNF354AO60765 605 aaPredicted RBP3□□□□□ -1.93
SF3B1-203ENST00000414174 YIF1AO95070 293 aa3□□□□□ -1.93
SF3B1-203ENST00000414174 OR2H2O95918 312 aa3□□□□□ -1.93
SF3B1-203ENST00000414174 PLAUP00749 431 aa3□□□□□ -1.93
SF3B1-203ENST00000414174 CSN2P05814 226 aa3□□□□□ -1.93
SF3B1-203ENST00000414174 H1F0P07305 194 aaKnown RBP3□□□□□ -1.93
SF3B1-203ENST00000414174 LGALS1P09382 135 aaKnown RBP3□□□□□ -1.93
SF3B1-203ENST00000414174 AKAIN1P0CW23 69 aa3□□□□□ -1.93
SF3B1-203ENST00000414174 T-ENOLP0DO92 83 aa3□□□□□ -1.93
SF3B1-203ENST00000414174 HIST1H1DP16402 221 aaKnown RBP3□□□□□ -1.93
SF3B1-203ENST00000414174 ZNF708P17019 499 aa3□□□□□ -1.93
SF3B1-203ENST00000414174 ATF1P18846 271 aa3□□□□□ -1.93
SF3B1-203ENST00000414174 GALR1P47211 349 aa3□□□□□ -1.93
SF3B1-203ENST00000414174 ZNF84P51523 738 aa3□□□□□ -1.93
SF3B1-203ENST00000414174 AQP4P55087 323 aa3□□□□□ -1.93
SF3B1-203ENST00000414174 OR1D5P58170 312 aa3□□□□□ -1.93
SF3B1-203ENST00000414174 ISL1P61371 349 aa3□□□□□ -1.93
SF3B1-203ENST00000414174 SRPXP78539 464 aa3□□□□□ -1.93
SF3B1-203ENST00000414174 FOXF2Q12947 444 aa3□□□□□ -1.93
SF3B1-203ENST00000414174 TAF10Q12962 218 aa3□□□□□ -1.93
SF3B1-203ENST00000414174 PMAIP1Q13794 54 aa3□□□□□ -1.93
SF3B1-203ENST00000414174 PDGFRLQ15198 375 aa3□□□□□ -1.93
SF3B1-203ENST00000414174 PRR30Q53SZ7 412 aaPredicted RBP3□□□□□ -1.93
SF3B1-203ENST00000414174 VAX1Q5SQQ9 334 aa3□□□□□ -1.93
SF3B1-203ENST00000414174 BCL2L15Q5TBC7 163 aa3□□□□□ -1.93
SF3B1-203ENST00000414174 C1orf189Q5VU69 101 aa3□□□□□ -1.93
SF3B1-203ENST00000414174 GDPGP1Q6ZNW5 385 aa3□□□□□ -1.93
SF3B1-203ENST00000414174 Q6ZRG5 221 aa3□□□□□ -1.93
SF3B1-203ENST00000414174 C1QL2Q7Z5L3 287 aa3□□□□□ -1.93
SF3B1-203ENST00000414174 HOGA1Q86XE5 327 aa3□□□□□ -1.93
SF3B1-203ENST00000414174 CBLN2Q8IUK8 224 aa3□□□□□ -1.93
SF3B1-203ENST00000414174 GAPTQ8N292 157 aa3□□□□□ -1.93
SF3B1-203ENST00000414174 TMEM86AQ8N2M4 240 aa3□□□□□ -1.93
SF3B1-203ENST00000414174 PAQR4Q8N4S7 273 aaPredicted RBP3□□□□□ -1.93
SF3B1-203ENST00000414174 COX18Q8N8Q8 333 aa3□□□□□ -1.93
SF3B1-203ENST00000414174 OR5AP2Q8NGF4 316 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms