RNA–Protein interactions for RNA: ENST00000413186.6

SYNE1-211, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 4,860 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-211ENST00000413186 GLRXP35754 106 aa7.38□□□□□ -1.23
SYNE1-211ENST00000413186 GAMTQ14353 236 aa7.38□□□□□ -1.23
SYNE1-211ENST00000413186 MSMO1Q15800 293 aa7.38□□□□□ -1.23
SYNE1-211ENST00000413186 GLDNQ6ZMI3 551 aaPredicted RBP7.38□□□□□ -1.23
SYNE1-211ENST00000413186 SPICQ8N5J4 248 aa7.38□□□□□ -1.23
SYNE1-211ENST00000413186 ARL6IP6Q8N6S5 226 aa7.38□□□□□ -1.23
SYNE1-211ENST00000413186 OR1S1Q8NH92 325 aa7.38□□□□□ -1.23
SYNE1-211ENST00000413186 SECTM1Q8WVN6 248 aa7.38□□□□□ -1.23
SYNE1-211ENST00000413186 ZDHHC8Q9ULC8 765 aa7.38□□□□□ -1.23
SYNE1-211ENST00000413186 LOC390937A0A1W2PQ73 354 aa7.38□□□□□ -1.23
SYNE1-211ENST00000413186 ZNF324O75467 553 aaPredicted RBP7.38□□□□□ -1.23
SYNE1-211ENST00000413186 PLGLAQ15195 96 aa7.38□□□□□ -1.23
SYNE1-211ENST00000413186 MRPL52Q86TS9 123 aaKnown RBP7.38□□□□□ -1.23
SYNE1-211ENST00000413186 SLC7A5P1Q8MH63 180 aa7.38□□□□□ -1.23
SYNE1-211ENST00000413186 SCCPDHQ8NBX0 429 aa7.38□□□□□ -1.23
SYNE1-211ENST00000413186 FYTTD1Q96QD9 318 aaKnown RBP7.38□□□□□ -1.23
SYNE1-211ENST00000413186 C12orf57Q99622 126 aa7.38□□□□□ -1.23
SYNE1-211ENST00000413186 NPAS1Q99742 590 aa7.38□□□□□ -1.23
SYNE1-211ENST00000413186 SEC22CQ9BRL7 303 aa7.38□□□□□ -1.23
SYNE1-211ENST00000413186 HRH4Q9H3N8 390 aa7.38□□□□□ -1.23
SYNE1-211ENST00000413186 POFUT1Q9H488 388 aa7.38□□□□□ -1.23
SYNE1-211ENST00000413186 CISD1Q9NZ45 108 aaKnown RBP7.38□□□□□ -1.23
SYNE1-211ENST00000413186 MBD3L4A6NDZ8 208 aaPredicted RBP7.38□□□□□ -1.23
SYNE1-211ENST00000413186 MBD3L3A6NE82 208 aaPredicted RBP7.38□□□□□ -1.23
SYNE1-211ENST00000413186 MBD3L5A6NJ08 208 aaPredicted RBP7.38□□□□□ -1.23
SYNE1-211ENST00000413186 M0QYG6 137 aa7.38□□□□□ -1.23
SYNE1-211ENST00000413186 TAAR5O14804 337 aa7.38□□□□□ -1.23
SYNE1-211ENST00000413186 SMIM6P0DI80 62 aa7.38□□□□□ -1.23
SYNE1-211ENST00000413186 NFYBP25208 207 aa7.38□□□□□ -1.23
SYNE1-211ENST00000413186 TCL1AP56279 114 aa7.38□□□□□ -1.23
SYNE1-211ENST00000413186 ZNF92Q03936 586 aa7.38□□□□□ -1.23
SYNE1-211ENST00000413186 OR2AK2Q8NG84 335 aa7.38□□□□□ -1.23
SYNE1-211ENST00000413186 OR4A4PQ8NGN8 299 aa7.38□□□□□ -1.23
SYNE1-211ENST00000413186 OR4F5Q8NH21 305 aa7.38□□□□□ -1.23
SYNE1-211ENST00000413186 MBD3L2Q8NHZ7 208 aaPredicted RBP7.38□□□□□ -1.23
SYNE1-211ENST00000413186 SCARB1Q8WTV0 552 aa7.38□□□□□ -1.23
SYNE1-211ENST00000413186 OR4F4Q96R69 305 aa7.38□□□□□ -1.23
SYNE1-211ENST00000413186 DHRS9Q9BPW9 319 aa7.38□□□□□ -1.23
SYNE1-211ENST00000413186 GSX2Q9BZM3 304 aa7.38□□□□□ -1.23
SYNE1-211ENST00000413186 SH2D2AQ9NP31 389 aa7.38□□□□□ -1.23
SYNE1-211ENST00000413186 FAM206AQ9NX38 181 aa7.38□□□□□ -1.23
SYNE1-211ENST00000413186 CSAG2Q9Y5P2 127 aa7.38□□□□□ -1.23
SYNE1-211ENST00000413186 TRBV5-5A0A0J9YX44 114 aa7.38□□□□□ -1.23
SYNE1-211ENST00000413186 ANKRD20A5PA0PJZ0 165 aa7.38□□□□□ -1.23
SYNE1-211ENST00000413186 CDC14BO60729 498 aa7.38□□□□□ -1.23
SYNE1-211ENST00000413186 CTAG2O75638 210 aa7.38□□□□□ -1.23
SYNE1-211ENST00000413186 IGHV1-2P23083 117 aa7.38□□□□□ -1.23
SYNE1-211ENST00000413186 PLP1P60201 277 aa7.38□□□□□ -1.23
SYNE1-211ENST00000413186 NAAAQ02083 359 aa7.38□□□□□ -1.23
SYNE1-211ENST00000413186 FAM27E3Q08E93 113 aa7.38□□□□□ -1.23
SYNE1-211ENST00000413186 MPV17LQ2QL34 196 aa7.38□□□□□ -1.23
SYNE1-211ENST00000413186 CEACAM21Q3KPI0 293 aa7.38□□□□□ -1.23
SYNE1-211ENST00000413186 OR4C16Q8NGL9 310 aa7.38□□□□□ -1.23
SYNE1-211ENST00000413186 OR5M8Q8NGP6 311 aa7.38□□□□□ -1.23
SYNE1-211ENST00000413186 YIPF5Q969M3 257 aa7.38□□□□□ -1.23
SYNE1-211ENST00000413186 TVP23CQ96ET8 276 aa7.38□□□□□ -1.23
SYNE1-211ENST00000413186 PLPPR2Q96GM1 343 aa7.38□□□□□ -1.23
SYNE1-211ENST00000413186 UHRF2Q96PU4 802 aa7.38□□□□□ -1.23
SYNE1-211ENST00000413186 PPP1R3EQ9H7J1 279 aa7.38□□□□□ -1.23
SYNE1-211ENST00000413186 PLSCR4Q9NRQ2 329 aa7.38□□□□□ -1.23
SYNE1-211ENST00000413186 DKK4Q9UBT3 224 aa7.38□□□□□ -1.23
SYNE1-211ENST00000413186 SF3B6Q9Y3B4 125 aaKnown RBP7.38□□□□□ -1.23
SYNE1-211ENST00000413186 ABCA1O95477 2261 aa7.37□□□□□ -1.23
SYNE1-211ENST00000413186 A0A0B4J203 849 aa7.37□□□□□ -1.23
SYNE1-211ENST00000413186 OR4C46A6NHA9 309 aa7.37□□□□□ -1.23
SYNE1-211ENST00000413186 CEACAM4O75871 244 aa7.37□□□□□ -1.23
SYNE1-211ENST00000413186 HLXQ14774 488 aaPredicted RBP7.37□□□□□ -1.23
SYNE1-211ENST00000413186 DMRTC1Q5HYR2 192 aa7.37□□□□□ -1.23
SYNE1-211ENST00000413186 AADACL3Q5VUY0 350 aa7.37□□□□□ -1.23
SYNE1-211ENST00000413186 FAHD2BQ6P2I3 314 aaPredicted RBP7.37□□□□□ -1.23
SYNE1-211ENST00000413186 MEX3BQ6ZN04 569 aaKnown RBP7.37□□□□□ -1.23
SYNE1-211ENST00000413186 OR10AC1Q8NH08 325 aa7.37□□□□□ -1.23
SYNE1-211ENST00000413186 RNF141Q8WVD5 230 aa7.37□□□□□ -1.23
SYNE1-211ENST00000413186 ZNF331Q9NQX6 463 aaPredicted RBP7.37□□□□□ -1.23
SYNE1-211ENST00000413186 OR6C3Q9NZP0 311 aa7.37□□□□□ -1.23
SYNE1-211ENST00000413186 PDE6DO43924 150 aa7.37□□□□□ -1.23
SYNE1-211ENST00000413186 CD3DP04234 171 aa7.37□□□□□ -1.23
SYNE1-211ENST00000413186 GLI4P10075 376 aa7.37□□□□□ -1.23
SYNE1-211ENST00000413186 SPNP16150 400 aa7.37□□□□□ -1.23
SYNE1-211ENST00000413186 OR3A4PP47883 348 aa7.37□□□□□ -1.23
SYNE1-211ENST00000413186 INSL4Q14641 139 aa7.37□□□□□ -1.23
SYNE1-211ENST00000413186 IGFL2Q6UWQ7 119 aa7.37□□□□□ -1.23
SYNE1-211ENST00000413186 ZIC4Q8N9L1 334 aa7.37□□□□□ -1.23
SYNE1-211ENST00000413186 OR8G5Q8NG78 346 aa7.37□□□□□ -1.23
SYNE1-211ENST00000413186 ADAT3Q96EY9 351 aaPredicted RBP7.37□□□□□ -1.23
SYNE1-211ENST00000413186 RHOFQ9HBH0 211 aa7.37□□□□□ -1.23
SYNE1-211ENST00000413186 IL19Q9UHD0 177 aa7.37□□□□□ -1.23
SYNE1-211ENST00000413186 FBXO7Q9Y3I1 522 aa7.37□□□□□ -1.23
SYNE1-211ENST00000413186 A0A1W2PNU3 283 aaPredicted RBP7.37□□□□□ -1.23
SYNE1-211ENST00000413186 CA11O75493 328 aa7.37□□□□□ -1.23
SYNE1-211ENST00000413186 SLC25A5P05141 298 aaKnown RBP7.37□□□□□ -1.23
SYNE1-211ENST00000413186 OR4E1P0C645 316 aa7.37□□□□□ -1.23
SYNE1-211ENST00000413186 AREGP15514 252 aa7.37□□□□□ -1.23
SYNE1-211ENST00000413186 ANXA7P20073 488 aaKnown RBP7.37□□□□□ -1.23
SYNE1-211ENST00000413186 PDZK1IP1Q13113 114 aa7.37□□□□□ -1.23
SYNE1-211ENST00000413186 ZNF362Q5T0B9 420 aaPredicted RBP7.37□□□□□ -1.23
SYNE1-211ENST00000413186 LINC00596Q86U02 117 aa7.37□□□□□ -1.23
SYNE1-211ENST00000413186 RFLNBQ8N5W9 214 aa7.37□□□□□ -1.23
SYNE1-211ENST00000413186 OR10AD1Q8NGE0 317 aa7.37□□□□□ -1.23
SYNE1-211ENST00000413186 NUDCD2Q8WVJ2 157 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms