RNA–Protein interactions for RNA: ENST00000412227.6

CROT-202, Transcript of carnitine O-octanoyltransferase, humanhuman

TSL 1 (best) BASIC

Gene CROT, Length 1,213 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROT-202ENST00000412227 IFT22Q9H7X7 185 aa17.34■□□□□ 0.37
CROT-202ENST00000412227 IGHV3-72A0A0B4J1Y9 119 aa17.33■□□□□ 0.36
CROT-202ENST00000412227 IGHV1-3A0A0C4DH29 117 aa17.33■□□□□ 0.36
CROT-202ENST00000412227 TMEM30CPA0ZSE6 113 aa17.33■□□□□ 0.36
CROT-202ENST00000412227 NCBP2LA6PVI3 153 aaKnown RBP17.33■□□□□ 0.36
CROT-202ENST00000412227 ZNF93P35789 620 aaPredicted RBP17.33■□□□□ 0.36
CROT-202ENST00000412227 REG1BP48304 166 aa17.33■□□□□ 0.36
CROT-202ENST00000412227 PPP3R1P63098 170 aa17.33■□□□□ 0.36
CROT-202ENST00000412227 CD69Q07108 199 aa17.33■□□□□ 0.36
CROT-202ENST00000412227 EBI3Q14213 229 aa17.33■□□□□ 0.36
CROT-202ENST00000412227 CCDC58Q4VC31 144 aa17.33■□□□□ 0.36
CROT-202ENST00000412227 NHLRC3Q5JS37 347 aa17.33■□□□□ 0.36
CROT-202ENST00000412227 DDI2Q5TDH0 399 aa17.33■□□□□ 0.36
CROT-202ENST00000412227 XAF1Q6GPH4 301 aa17.33■□□□□ 0.36
CROT-202ENST00000412227 RPL22L1Q6P5R6 122 aaKnown RBP17.33■□□□□ 0.36
CROT-202ENST00000412227 STPG2Q8N412 459 aa17.33■□□□□ 0.36
CROT-202ENST00000412227 ARL11Q969Q4 196 aa17.33■□□□□ 0.36
CROT-202ENST00000412227 TMEM138Q9NPI0 162 aa17.33■□□□□ 0.36
CROT-202ENST00000412227 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP17.33■□□□□ 0.36
CROT-202ENST00000412227 IL36GQ9NZH8 169 aa17.33■□□□□ 0.36
CROT-202ENST00000412227 NBEAL2Q6ZNJ1 2754 aa17.33■□□□□ 0.36
CROT-202ENST00000412227 LINC01548A6NM66 108 aa17.32■□□□□ 0.36
CROT-202ENST00000412227 GEMIN2O14893 280 aaKnown RBP17.32■□□□□ 0.36
CROT-202ENST00000412227 SERPINA2P20848 420 aa17.32■□□□□ 0.36
CROT-202ENST00000412227 ATAD3CQ5T2N8 411 aa17.32■□□□□ 0.36
CROT-202ENST00000412227 UNQ9370/PRO34162Q6UXP9 181 aa17.32■□□□□ 0.36
CROT-202ENST00000412227 ZNF695Q8IW36 515 aa17.32■□□□□ 0.36
CROT-202ENST00000412227 C10orf67Q8IYJ2 551 aa17.32■□□□□ 0.36
CROT-202ENST00000412227 UBALD1Q8TB05 177 aa17.32■□□□□ 0.36
CROT-202ENST00000412227 NEK7Q8TDX7 302 aa17.32■□□□□ 0.36
CROT-202ENST00000412227 APH1BQ8WW43 257 aa17.32■□□□□ 0.36
CROT-202ENST00000412227 EAF1Q96JC9 268 aaPredicted RBP17.32■□□□□ 0.36
CROT-202ENST00000412227 FGF20Q9NP95 211 aaPredicted RBP17.32■□□□□ 0.36
CROT-202ENST00000412227 PAK1IP1Q9NWT1 392 aaPredicted RBP17.32■□□□□ 0.36
CROT-202ENST00000412227 SDCBPO00560 298 aaPredicted RBP17.31■□□□□ 0.36
CROT-202ENST00000412227 BDKRB2P30411 391 aa17.31■□□□□ 0.36
CROT-202ENST00000412227 TMPRSS11AQ6ZMR5 421 aa17.31■□□□□ 0.36
CROT-202ENST00000412227 LINC00596Q86U02 117 aa17.31■□□□□ 0.36
CROT-202ENST00000412227 TGIF2LXQ8IUE1 241 aa17.31■□□□□ 0.36
CROT-202ENST00000412227 OR52M1Q8NGK5 317 aa17.31■□□□□ 0.36
CROT-202ENST00000412227 OR2T10Q8NGZ9 312 aa17.31■□□□□ 0.36
CROT-202ENST00000412227 CCDC107Q8WV48 283 aa17.31■□□□□ 0.36
CROT-202ENST00000412227 P2RX4Q99571 388 aa17.31■□□□□ 0.36
CROT-202ENST00000412227 C15orf65H3BRN8 121 aa17.3■□□□□ 0.36
CROT-202ENST00000412227 AP4M1O00189 453 aa17.3■□□□□ 0.36
CROT-202ENST00000412227 ETV1P50549 477 aa17.3■□□□□ 0.36
CROT-202ENST00000412227 SMN1Q16637 294 aaKnown RBP17.3■□□□□ 0.36
CROT-202ENST00000412227 MPV17LQ2QL34 196 aa17.3■□□□□ 0.36
CROT-202ENST00000412227 OR2G6Q5TZ20 316 aa17.3■□□□□ 0.36
CROT-202ENST00000412227 TEX38Q6PEX7 206 aa17.3■□□□□ 0.36
CROT-202ENST00000412227 IZUMO1Q8IYV9 350 aa17.3■□□□□ 0.36
CROT-202ENST00000412227 LINC00311Q8N616 119 aa17.3■□□□□ 0.36
CROT-202ENST00000412227 ORAI1Q96D31 301 aa17.3■□□□□ 0.36
CROT-202ENST00000412227 DUX3Q96PT4 197 aa17.3■□□□□ 0.36
CROT-202ENST00000412227 B9D2Q9BPU9 175 aa17.3■□□□□ 0.36
CROT-202ENST00000412227 ABCG5Q9H222 651 aa17.3■□□□□ 0.36
CROT-202ENST00000412227 LIN7CQ9NUP9 197 aaKnown RBP17.3■□□□□ 0.36
CROT-202ENST00000412227 GFOD1Q9NXC2 390 aa17.3■□□□□ 0.36
CROT-202ENST00000412227 IGHV3-43A0A0B4J1X8 118 aa17.29■□□□□ 0.36
CROT-202ENST00000412227 ORC5O43913 435 aa17.29■□□□□ 0.36
CROT-202ENST00000412227 ZNF780AO75290 641 aaPredicted RBP17.29■□□□□ 0.36
CROT-202ENST00000412227 IGHV3-43DP0DP04 118 aa17.29■□□□□ 0.36
CROT-202ENST00000412227 IL3RAP26951 378 aa17.29■□□□□ 0.36
CROT-202ENST00000412227 GPR12P47775 334 aa17.29■□□□□ 0.36
CROT-202ENST00000412227 RAB25P57735 213 aa17.29■□□□□ 0.36
CROT-202ENST00000412227 PNLIPRP3Q17RR3 467 aa17.29■□□□□ 0.36
CROT-202ENST00000412227 Q8N6K4 173 aa17.29■□□□□ 0.36
CROT-202ENST00000412227 GON7Q9BXV9 100 aa17.29■□□□□ 0.36
CROT-202ENST00000412227 ZMAT5Q9UDW3 170 aaKnown RBP17.29■□□□□ 0.36
CROT-202ENST00000412227 AIPO00170 330 aa17.28■□□□□ 0.36
CROT-202ENST00000412227 GTF2F2P13984 249 aa17.28■□□□□ 0.36
CROT-202ENST00000412227 DCKP27707 260 aa17.28■□□□□ 0.36
CROT-202ENST00000412227 CD1BP29016 333 aa17.28■□□□□ 0.36
CROT-202ENST00000412227 RIPK1Q13546 671 aa17.28■□□□□ 0.36
CROT-202ENST00000412227 DCTN2Q13561 401 aaKnown RBP17.28■□□□□ 0.36
CROT-202ENST00000412227 SLC22A6Q4U2R8 563 aa17.28■□□□□ 0.36
CROT-202ENST00000412227 FAM53AQ6NSI3 398 aaPredicted RBP17.28■□□□□ 0.36
CROT-202ENST00000412227 STX19Q8N4C7 294 aa17.28■□□□□ 0.36
CROT-202ENST00000412227 C8orf31Q8N9H6 132 aa17.28■□□□□ 0.36
CROT-202ENST00000412227 Q8N9W7 124 aa17.28■□□□□ 0.36
CROT-202ENST00000412227 RTN4IP1Q8WWV3 396 aaPredicted RBP17.28■□□□□ 0.36
CROT-202ENST00000412227 RAX2Q96IS3 184 aa17.28■□□□□ 0.36
CROT-202ENST00000412227 ZNF184Q99676 751 aaPredicted RBP17.28■□□□□ 0.36
CROT-202ENST00000412227 SIRT4Q9Y6E7 314 aaPredicted RBP17.28■□□□□ 0.36
CROT-202ENST00000412227 A0A1W2PP11 408 aa17.27■□□□□ 0.36
CROT-202ENST00000412227 H0YHG0 523 aa17.27■□□□□ 0.36
CROT-202ENST00000412227 CCL24O00175 119 aa17.27■□□□□ 0.36
CROT-202ENST00000412227 OGG1O15527 345 aa17.27■□□□□ 0.36
CROT-202ENST00000412227 WBP4O75554 376 aaKnown RBP17.27■□□□□ 0.36
CROT-202ENST00000412227 MOSP00540 346 aa17.27■□□□□ 0.36
CROT-202ENST00000412227 MT-ND4P03905 459 aa17.27■□□□□ 0.36
CROT-202ENST00000412227 RPLP1P05386 114 aaKnown RBP17.27■□□□□ 0.36
CROT-202ENST00000412227 DGCR2P98153 550 aa17.27■□□□□ 0.36
CROT-202ENST00000412227 CXorf66Q5JRM2 361 aaPredicted RBP17.27■□□□□ 0.36
CROT-202ENST00000412227 ZNF497Q6ZNH5 498 aa17.27■□□□□ 0.36
CROT-202ENST00000412227 ZNF555Q8NEP9 628 aa17.27■□□□□ 0.36
CROT-202ENST00000412227 OR13C5Q8NGS8 318 aa17.27■□□□□ 0.36
CROT-202ENST00000412227 SMIM19Q96E16 107 aa17.27■□□□□ 0.36
CROT-202ENST00000412227 RASL11BQ9BPW5 248 aa17.27■□□□□ 0.36
CROT-202ENST00000412227 DCLRE1BQ9H816 532 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms