RNA–Protein interactions for RNA: ENST00000410054.5

R3HDM1-204, Transcript of R3H domain containing 1, humanhuman

TSL 2 BASIC

Gene R3HDM1, Length 4,442 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-204ENST00000410054 RIMBP3Q9UFD9 1639 aa4.59□□□□□ -1.67
R3HDM1-204ENST00000410054 TCRBV3S1A0A5B6 114 aa4.59□□□□□ -1.67
R3HDM1-204ENST00000410054 C11orf98E9PRG8 122 aa4.59□□□□□ -1.67
R3HDM1-204ENST00000410054 UBL3O95164 117 aa4.59□□□□□ -1.67
R3HDM1-204ENST00000410054 PRSS3P35030 304 aa4.59□□□□□ -1.67
R3HDM1-204ENST00000410054 OPRM1P35372 400 aa4.59□□□□□ -1.67
R3HDM1-204ENST00000410054 ZFP36L2P47974 494 aaKnown RBP4.59□□□□□ -1.67
R3HDM1-204ENST00000410054 WNT3P56703 355 aa4.59□□□□□ -1.67
R3HDM1-204ENST00000410054 SRSF9Q13242 221 aaKnown RBP eCLIP4.59□□□□□ -1.67
R3HDM1-204ENST00000410054 INO80CQ6PI98 192 aaPredicted RBP4.59□□□□□ -1.67
R3HDM1-204ENST00000410054 ANKRD33Q7Z3H0 272 aa4.59□□□□□ -1.67
R3HDM1-204ENST00000410054 LRRC25Q8N386 305 aaPredicted RBP4.59□□□□□ -1.67
R3HDM1-204ENST00000410054 MRPL50Q8N5N7 158 aaKnown RBP4.59□□□□□ -1.67
R3HDM1-204ENST00000410054 SYT8Q8NBV8 401 aa4.59□□□□□ -1.67
R3HDM1-204ENST00000410054 OR1F12Q8NHA8 337 aa4.59□□□□□ -1.67
R3HDM1-204ENST00000410054 EDARADDQ8WWZ3 215 aa4.59□□□□□ -1.67
R3HDM1-204ENST00000410054 PIGTQ969N2 578 aa4.59□□□□□ -1.67
R3HDM1-204ENST00000410054 DEFB129Q9H1M3 183 aa4.59□□□□□ -1.67
R3HDM1-204ENST00000410054 NKX2-4Q9H2Z4 354 aa4.59□□□□□ -1.67
R3HDM1-204ENST00000410054 A0A087X0K7 114 aa4.59□□□□□ -1.67
R3HDM1-204ENST00000410054 TRBV9A0A0B4J1U6 114 aa4.59□□□□□ -1.67
R3HDM1-204ENST00000410054 TRAV2A0A0B4J234 112 aa4.59□□□□□ -1.67
R3HDM1-204ENST00000410054 MBD3L4A6NDZ8 208 aaPredicted RBP4.59□□□□□ -1.67
R3HDM1-204ENST00000410054 MBD3L3A6NE82 208 aaPredicted RBP4.59□□□□□ -1.67
R3HDM1-204ENST00000410054 PTHLHP12272 177 aa4.59□□□□□ -1.67
R3HDM1-204ENST00000410054 AGAP20933 346 aa4.59□□□□□ -1.67
R3HDM1-204ENST00000410054 GGTLC2Q14390 218 aa4.59□□□□□ -1.67
R3HDM1-204ENST00000410054 SLC25A35Q3KQZ1 300 aa4.59□□□□□ -1.67
R3HDM1-204ENST00000410054 CENPWQ5EE01 88 aa4.59□□□□□ -1.67
R3HDM1-204ENST00000410054 NHLRC3Q5JS37 347 aa4.59□□□□□ -1.67
R3HDM1-204ENST00000410054 SAMD5Q5TGI4 173 aa4.59□□□□□ -1.67
R3HDM1-204ENST00000410054 RNF128Q8TEB7 428 aa4.59□□□□□ -1.67
R3HDM1-204ENST00000410054 HAPLN2Q9GZV7 340 aa4.59□□□□□ -1.67
R3HDM1-204ENST00000410054 FBXL12Q9NXK8 326 aa4.59□□□□□ -1.67
R3HDM1-204ENST00000410054 VPREB3Q9UKI3 123 aa4.59□□□□□ -1.67
R3HDM1-204ENST00000410054 HCFC2Q9Y5Z7 792 aa4.59□□□□□ -1.67
R3HDM1-204ENST00000410054 MYO18AQ92614 2054 aaKnown RBP4.59□□□□□ -1.67
R3HDM1-204ENST00000410054 TRAV9-1A0A075B6T8 112 aa4.59□□□□□ -1.68
R3HDM1-204ENST00000410054 A0A1W2PPC1 479 aa4.59□□□□□ -1.68
R3HDM1-204ENST00000410054 TMEM229AB2RXF0 380 aa4.59□□□□□ -1.68
R3HDM1-204ENST00000410054 ZNF670-ZNF695F2Z2N8 137 aa4.59□□□□□ -1.68
R3HDM1-204ENST00000410054 HPNP05981 417 aa4.59□□□□□ -1.68
R3HDM1-204ENST00000410054 TSFMP43897 325 aaKnown RBP4.59□□□□□ -1.68
R3HDM1-204ENST00000410054 FABP5Q01469 135 aa4.59□□□□□ -1.68
R3HDM1-204ENST00000410054 D2HGDHQ8N465 521 aa4.59□□□□□ -1.68
R3HDM1-204ENST00000410054 OR1S1Q8NH92 325 aa4.59□□□□□ -1.68
R3HDM1-204ENST00000410054 SHKBP1Q8TBC3 707 aa4.59□□□□□ -1.68
R3HDM1-204ENST00000410054 MYOZ3Q8TDC0 251 aa4.59□□□□□ -1.68
R3HDM1-204ENST00000410054 WIPF2Q8TF74 440 aaPredicted RBP4.59□□□□□ -1.68
R3HDM1-204ENST00000410054 PELI1Q96FA3 418 aa4.59□□□□□ -1.68
R3HDM1-204ENST00000410054 MYADMQ96S97 322 aa4.59□□□□□ -1.68
R3HDM1-204ENST00000410054 NXT2Q9NPJ8 142 aaKnown RBP4.59□□□□□ -1.68
R3HDM1-204ENST00000410054 NEUROG3Q9Y4Z2 214 aa4.59□□□□□ -1.68
R3HDM1-204ENST00000410054 LRRC7Q96NW7 1537 aa4.59□□□□□ -1.68
R3HDM1-204ENST00000410054 WDFY3Q8IZQ1 3526 aa4.59□□□□□ -1.68
R3HDM1-204ENST00000410054 CEMIPQ8WUJ3 1361 aa4.58□□□□□ -1.68
R3HDM1-204ENST00000410054 USP34Q70CQ2 3546 aa4.58□□□□□ -1.68
R3HDM1-204ENST00000410054 DLC1Q96QB1 1528 aa4.58□□□□□ -1.68
R3HDM1-204ENST00000410054 ZNF840PA6NDX5 716 aa4.58□□□□□ -1.68
R3HDM1-204ENST00000410054 PPIHO43447 177 aaKnown RBP4.58□□□□□ -1.68
R3HDM1-204ENST00000410054 GALR3O60755 368 aaPredicted RBP4.58□□□□□ -1.68
R3HDM1-204ENST00000410054 AMBPP02760 352 aa4.58□□□□□ -1.68
R3HDM1-204ENST00000410054 REG1AP05451 166 aa4.58□□□□□ -1.68
R3HDM1-204ENST00000410054 STC1P52823 247 aa4.58□□□□□ -1.68
R3HDM1-204ENST00000410054 UBE2G1P62253 170 aa4.58□□□□□ -1.68
R3HDM1-204ENST00000410054 PAGE3Q5JUK9 113 aa4.58□□□□□ -1.68
R3HDM1-204ENST00000410054 CPB2Q96IY4 423 aa4.58□□□□□ -1.68
R3HDM1-204ENST00000410054 PRDM13Q9H4Q3 707 aa4.58□□□□□ -1.68
R3HDM1-204ENST00000410054 SLC25A19Q9HC21 320 aa4.58□□□□□ -1.68
R3HDM1-204ENST00000410054 NIP7Q9Y221 180 aaKnown RBP eCLIP4.58□□□□□ -1.68
R3HDM1-204ENST00000410054 NCAPD2Q15021 1401 aa4.58□□□□□ -1.68
R3HDM1-204ENST00000410054 REREQ9P2R6 1566 aa4.58□□□□□ -1.68
R3HDM1-204ENST00000410054 LMTK3Q96Q04 1460 aa4.58□□□□□ -1.68
R3HDM1-204ENST00000410054 SMIM28A0A1B0GU29 152 aa4.58□□□□□ -1.68
R3HDM1-204ENST00000410054 WIPF3A6NGB9 483 aa4.58□□□□□ -1.68
R3HDM1-204ENST00000410054 GPR25O00155 361 aa4.58□□□□□ -1.68
R3HDM1-204ENST00000410054 DUS4LO95620 317 aaKnown RBP4.58□□□□□ -1.68
R3HDM1-204ENST00000410054 PNLIPP16233 465 aa4.58□□□□□ -1.68
R3HDM1-204ENST00000410054 COL8A1P27658 744 aa4.58□□□□□ -1.68
R3HDM1-204ENST00000410054 CCKBRP32239 447 aa4.58□□□□□ -1.68
R3HDM1-204ENST00000410054 CDKN2AP42771 156 aaKnown RBP4.58□□□□□ -1.68
R3HDM1-204ENST00000410054 DCAF12Q5T6F0 453 aa4.58□□□□□ -1.68
R3HDM1-204ENST00000410054 SLC35E4Q6ICL7 350 aa4.58□□□□□ -1.68
R3HDM1-204ENST00000410054 ACSM6Q6P461 480 aa4.58□□□□□ -1.68
R3HDM1-204ENST00000410054 CD164L2Q6UWJ8 174 aa4.58□□□□□ -1.68
R3HDM1-204ENST00000410054 IL17RELQ6ZVW7 336 aa4.58□□□□□ -1.68
R3HDM1-204ENST00000410054 TMEM125Q96AQ2 219 aa4.58□□□□□ -1.68
R3HDM1-204ENST00000410054 RNF39Q9H2S5 420 aa4.58□□□□□ -1.68
R3HDM1-204ENST00000410054 MRPS16Q9Y3D3 137 aaKnown RBP4.58□□□□□ -1.68
R3HDM1-204ENST00000410054 ALKQ9UM73 1620 aa4.58□□□□□ -1.68
R3HDM1-204ENST00000410054 CHD5Q8TDI0 1954 aa4.58□□□□□ -1.68
R3HDM1-204ENST00000410054 CEACAM18A8MTB9 384 aa4.58□□□□□ -1.68
R3HDM1-204ENST00000410054 MLNRO43193 412 aa4.58□□□□□ -1.68
R3HDM1-204ENST00000410054 TMEM33P57088 247 aa4.58□□□□□ -1.68
R3HDM1-204ENST00000410054 NXPH1P58417 271 aa4.58□□□□□ -1.68
R3HDM1-204ENST00000410054 NPC2P61916 151 aa4.58□□□□□ -1.68
R3HDM1-204ENST00000410054 TMEM139Q8IV31 216 aa4.58□□□□□ -1.68
R3HDM1-204ENST00000410054 MANBALQ9NQG1 85 aa4.58□□□□□ -1.68
R3HDM1-204ENST00000410054 ABRACLQ9P1F3 81 aa4.58□□□□□ -1.68
R3HDM1-204ENST00000410054 CHST2Q9Y4C5 530 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms