RNA–Protein interactions for RNA: ENST00000409854.5

EPHA4-202, Transcript of EPH receptor A4, humanhuman

TSL 1 (best) BASIC

Gene EPHA4, Length 3,454 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-202ENST00000409854 TNFSF4P23510 183 aa4.63□□□□□ -1.67
EPHA4-202ENST00000409854 APOBEC3AP31941 199 aaPredicted RBP4.63□□□□□ -1.67
EPHA4-202ENST00000409854 SERPINF1P36955 418 aa4.63□□□□□ -1.67
EPHA4-202ENST00000409854 KCNJ3P48549 501 aa4.63□□□□□ -1.67
EPHA4-202ENST00000409854 TNFAIP6P98066 277 aaPredicted RBP4.63□□□□□ -1.67
EPHA4-202ENST00000409854 FCN2Q15485 313 aa4.63□□□□□ -1.67
EPHA4-202ENST00000409854 MST1LQ2TV78 715 aa4.63□□□□□ -1.67
EPHA4-202ENST00000409854 PAN3Q58A45 887 aaKnown RBP4.63□□□□□ -1.67
EPHA4-202ENST00000409854 TMEM65Q6PI78 240 aa4.63□□□□□ -1.67
EPHA4-202ENST00000409854 CLEC2AQ6UVW9 174 aa4.63□□□□□ -1.67
EPHA4-202ENST00000409854 C20orf204Q6ZNR8 217 aa4.63□□□□□ -1.67
EPHA4-202ENST00000409854 MOGAT3Q86VF5 341 aa4.63□□□□□ -1.67
EPHA4-202ENST00000409854 SPICQ8N5J4 248 aa4.63□□□□□ -1.67
EPHA4-202ENST00000409854 TMEM185AQ8NFB2 350 aa4.63□□□□□ -1.67
EPHA4-202ENST00000409854 ZFAND1Q8TCF1 268 aa4.63□□□□□ -1.67
EPHA4-202ENST00000409854 RDH5Q92781 318 aa4.63□□□□□ -1.67
EPHA4-202ENST00000409854 CNTNAP3BQ96NU0 1288 aa4.63□□□□□ -1.67
EPHA4-202ENST00000409854 CITED4Q96RK1 184 aa4.63□□□□□ -1.67
EPHA4-202ENST00000409854 CNTNAP3Q9BZ76 1288 aa4.63□□□□□ -1.67
EPHA4-202ENST00000409854 LIME1Q9H400 295 aa4.63□□□□□ -1.67
EPHA4-202ENST00000409854 BEX1Q9HBH7 125 aa4.63□□□□□ -1.67
EPHA4-202ENST00000409854 MBNL3Q9NUK0 354 aaKnown RBP4.63□□□□□ -1.67
EPHA4-202ENST00000409854 ZNF222Q9UK12 451 aa4.63□□□□□ -1.67
EPHA4-202ENST00000409854 WIPI2Q9Y4P8 454 aa4.63□□□□□ -1.67
EPHA4-202ENST00000409854 ARFGEF3Q5TH69 2177 aa4.63□□□□□ -1.67
EPHA4-202ENST00000409854 ATRXP46100 2492 aa4.63□□□□□ -1.67
EPHA4-202ENST00000409854 MEIKINA0A087WXM9 373 aa4.63□□□□□ -1.67
EPHA4-202ENST00000409854 KIR2DS1A0A191URI9 304 aa4.63□□□□□ -1.67
EPHA4-202ENST00000409854 VSTM5A8MXK1 200 aa4.63□□□□□ -1.67
EPHA4-202ENST00000409854 NPIPB11E5RHQ5 1161 aa4.63□□□□□ -1.67
EPHA4-202ENST00000409854 SIRPB1O00241 398 aa4.63□□□□□ -1.67
EPHA4-202ENST00000409854 SDCBPO00560 298 aaPredicted RBP4.63□□□□□ -1.67
EPHA4-202ENST00000409854 TXNL1O43396 289 aa4.63□□□□□ -1.67
EPHA4-202ENST00000409854 PSPNO60542 156 aa4.63□□□□□ -1.67
EPHA4-202ENST00000409854 SNAPC5O75971 98 aa4.63□□□□□ -1.67
EPHA4-202ENST00000409854 DIRAS3O95661 229 aa4.63□□□□□ -1.67
EPHA4-202ENST00000409854 RLN1P04808 185 aa4.63□□□□□ -1.67
EPHA4-202ENST00000409854 OR5H8P0DN80 308 aa4.63□□□□□ -1.67
EPHA4-202ENST00000409854 ZP3P21754 424 aa4.63□□□□□ -1.67
EPHA4-202ENST00000409854 ZBTB25P24278 435 aa4.63□□□□□ -1.67
EPHA4-202ENST00000409854 KIR2DS4P43632 304 aa4.63□□□□□ -1.67
EPHA4-202ENST00000409854 TAS2R31P59538 309 aa4.63□□□□□ -1.67
EPHA4-202ENST00000409854 SNTB1Q13884 538 aaKnown RBP4.63□□□□□ -1.67
EPHA4-202ENST00000409854 KIR2DS1Q14954 304 aa4.63□□□□□ -1.67
EPHA4-202ENST00000409854 CLRN3Q8NCR9 226 aa4.63□□□□□ -1.67
EPHA4-202ENST00000409854 MARCH1Q8TCQ1 289 aa4.63□□□□□ -1.67
EPHA4-202ENST00000409854 ZNF431Q8TF32 576 aaPredicted RBP4.63□□□□□ -1.67
EPHA4-202ENST00000409854 NEUROG1Q92886 237 aa4.63□□□□□ -1.67
EPHA4-202ENST00000409854 CABLES2Q9BTV7 478 aa4.63□□□□□ -1.67
EPHA4-202ENST00000409854 FXYD6Q9H0Q3 95 aa4.63□□□□□ -1.67
EPHA4-202ENST00000409854 C5orf66Q9H5L9 145 aa4.63□□□□□ -1.67
EPHA4-202ENST00000409854 RANGRFQ9HD47 186 aaPredicted RBP4.63□□□□□ -1.67
EPHA4-202ENST00000409854 MGAT4AQ9UM21 535 aa4.63□□□□□ -1.67
EPHA4-202ENST00000409854 IGKV1D-17A0A075B6S4 117 aa4.63□□□□□ -1.67
EPHA4-202ENST00000409854 hCG_1807616A0A1W2PRN6 198 aa4.63□□□□□ -1.67
EPHA4-202ENST00000409854 TRDCB7Z8K6 153 aa4.63□□□□□ -1.67
EPHA4-202ENST00000409854 B9A039 149 aa4.63□□□□□ -1.67
EPHA4-202ENST00000409854 M0R233 179 aa4.63□□□□□ -1.67
EPHA4-202ENST00000409854 HSPB6O14558 160 aa4.63□□□□□ -1.67
EPHA4-202ENST00000409854 SLC31A2O15432 143 aa4.63□□□□□ -1.67
EPHA4-202ENST00000409854 PSG2P11465 335 aa4.63□□□□□ -1.67
EPHA4-202ENST00000409854 OR3A1P47881 315 aa4.63□□□□□ -1.67
EPHA4-202ENST00000409854 CEBPDP49716 269 aaPredicted RBP4.63□□□□□ -1.67
EPHA4-202ENST00000409854 HLA-DRB3P79483 266 aa4.63□□□□□ -1.67
EPHA4-202ENST00000409854 HOXA4Q00056 320 aaPredicted RBP4.63□□□□□ -1.67
EPHA4-202ENST00000409854 HERPUD1Q15011 391 aa4.63□□□□□ -1.67
EPHA4-202ENST00000409854 SWI5Q1ZZU3 235 aa4.63□□□□□ -1.67
EPHA4-202ENST00000409854 ZNF672Q499Z4 452 aaPredicted RBP4.63□□□□□ -1.67
EPHA4-202ENST00000409854 TEX36Q5VZQ5 186 aa4.63□□□□□ -1.67
EPHA4-202ENST00000409854 SLC35E4Q6ICL7 350 aa4.63□□□□□ -1.67
EPHA4-202ENST00000409854 C17orf107Q6ZR85 190 aa4.63□□□□□ -1.67
EPHA4-202ENST00000409854 MUC20Q8N307 709 aaPredicted RBP4.63□□□□□ -1.67
EPHA4-202ENST00000409854 CD177Q8N6Q3 437 aa4.63□□□□□ -1.67
EPHA4-202ENST00000409854 OR52B4Q8NGK2 314 aa4.63□□□□□ -1.67
EPHA4-202ENST00000409854 TMEM230Q96A57 120 aa4.63□□□□□ -1.67
EPHA4-202ENST00000409854 MOB3AQ96BX8 217 aa4.63□□□□□ -1.67
EPHA4-202ENST00000409854 SCGB3A2Q96PL1 93 aa4.63□□□□□ -1.67
EPHA4-202ENST00000409854 NEU1Q99519 415 aa4.63□□□□□ -1.67
EPHA4-202ENST00000409854 ZNF2Q9BSG1 426 aaPredicted RBP4.63□□□□□ -1.67
EPHA4-202ENST00000409854 RTBDNQ9BSG5 229 aaPredicted RBP4.63□□□□□ -1.67
EPHA4-202ENST00000409854 CHMP1AQ9HD42 196 aaPredicted RBP4.63□□□□□ -1.67
EPHA4-202ENST00000409854 RNF7Q9UBF6 113 aa4.63□□□□□ -1.67
EPHA4-202ENST00000409854 PLCE1Q9P212 2302 aa4.63□□□□□ -1.67
EPHA4-202ENST00000409854 KALRNO60229 2985 aa4.62□□□□□ -1.67
EPHA4-202ENST00000409854 IGKV1-6A0A0C4DH72 117 aa4.62□□□□□ -1.67
EPHA4-202ENST00000409854 KRBOX1C9JBD0 128 aa4.62□□□□□ -1.67
EPHA4-202ENST00000409854 FABP7O15540 132 aa4.62□□□□□ -1.67
EPHA4-202ENST00000409854 ZG16O60844 167 aa4.62□□□□□ -1.67
EPHA4-202ENST00000409854 ZNF737O75373 536 aa4.62□□□□□ -1.67
EPHA4-202ENST00000409854 TUSC2O75896 110 aa4.62□□□□□ -1.67
EPHA4-202ENST00000409854 PLAUP00749 431 aa4.62□□□□□ -1.67
EPHA4-202ENST00000409854 IFNA2P01563 188 aa4.62□□□□□ -1.67
EPHA4-202ENST00000409854 H2AFB1P0C5Y9 115 aa4.62□□□□□ -1.67
EPHA4-202ENST00000409854 IGFBP2P18065 325 aa4.62□□□□□ -1.67
EPHA4-202ENST00000409854 TNFRSF1AP19438 455 aa4.62□□□□□ -1.67
EPHA4-202ENST00000409854 CXCL3P19876 107 aa4.62□□□□□ -1.67
EPHA4-202ENST00000409854 NPY4RP50391 375 aa4.62□□□□□ -1.67
EPHA4-202ENST00000409854 UCP3P55916 312 aa4.62□□□□□ -1.67
EPHA4-202ENST00000409854 SEC61A1P61619 476 aaKnown RBP4.62□□□□□ -1.67
EPHA4-202ENST00000409854 DHRS2Q13268 280 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms