RNA–Protein interactions for RNA: ENST00000409817.1

CXCR4-202, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS P3 BASIC

Gene CXCR4, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-202ENST00000409817 CABLES2Q9BTV7 478 aa6.34□□□□□ -1.39
CXCR4-202ENST00000409817 SLC25A32Q9H2D1 315 aa6.34□□□□□ -1.39
CXCR4-202ENST00000409817 HES4Q9HCC6 221 aa6.34□□□□□ -1.39
CXCR4-202ENST00000409817 TMED3Q9Y3Q3 217 aa6.34□□□□□ -1.39
CXCR4-202ENST00000409817 ZNF292O60281 2723 aa6.34□□□□□ -1.39
CXCR4-202ENST00000409817 LOC100996750A0A140TA64 210 aa6.34□□□□□ -1.39
CXCR4-202ENST00000409817 LEUTXA8MZ59 168 aa6.34□□□□□ -1.39
CXCR4-202ENST00000409817 K7ENP7 123 aa6.34□□□□□ -1.39
CXCR4-202ENST00000409817 PRRG2O14669 202 aa6.34□□□□□ -1.39
CXCR4-202ENST00000409817 CDIPTO14735 213 aa6.34□□□□□ -1.39
CXCR4-202ENST00000409817 TAAR5O14804 337 aa6.34□□□□□ -1.39
CXCR4-202ENST00000409817 MPPED1O15442 326 aa6.34□□□□□ -1.39
CXCR4-202ENST00000409817 AGFG2O95081 481 aa6.34□□□□□ -1.39
CXCR4-202ENST00000409817 HOXB5P09067 269 aa6.34□□□□□ -1.39
CXCR4-202ENST00000409817 WNT2P09544 360 aa6.34□□□□□ -1.39
CXCR4-202ENST00000409817 LMO1P25800 156 aa6.34□□□□□ -1.39
CXCR4-202ENST00000409817 MPV17P39210 176 aa6.34□□□□□ -1.39
CXCR4-202ENST00000409817 RPS23P62266 143 aaKnown RBP6.34□□□□□ -1.39
CXCR4-202ENST00000409817 EIF5AP63241 154 aaKnown RBP6.34□□□□□ -1.39
CXCR4-202ENST00000409817 ODF1Q14990 250 aa6.34□□□□□ -1.39
CXCR4-202ENST00000409817 TSC22D1Q15714 1073 aa6.34□□□□□ -1.39
CXCR4-202ENST00000409817 IAH1Q2TAA2 248 aaPredicted RBP6.34□□□□□ -1.39
CXCR4-202ENST00000409817 PAN3Q58A45 887 aaKnown RBP6.34□□□□□ -1.39
CXCR4-202ENST00000409817 IGSF11Q5DX21 431 aa6.34□□□□□ -1.39
CXCR4-202ENST00000409817 RGS7BPQ6MZT1 257 aaPredicted RBP6.34□□□□□ -1.39
CXCR4-202ENST00000409817 LDLRAD3Q86YD5 345 aa6.34□□□□□ -1.39
CXCR4-202ENST00000409817 CMTM1Q8IZ96 169 aa6.34□□□□□ -1.39
CXCR4-202ENST00000409817 STOML3Q8TAV4 291 aa6.34□□□□□ -1.39
CXCR4-202ENST00000409817 KIRREL1Q96J84 757 aa6.34□□□□□ -1.39
CXCR4-202ENST00000409817 OR10C1Q96KK4 312 aa6.34□□□□□ -1.39
CXCR4-202ENST00000409817 RNF126Q9BV68 326 aa6.34□□□□□ -1.39
CXCR4-202ENST00000409817 KRTAP4-6Q9BYQ5 205 aa6.34□□□□□ -1.39
CXCR4-202ENST00000409817 SEBOXQ9HB31 216 aaPredicted RBP6.34□□□□□ -1.39
CXCR4-202ENST00000409817 TMEM165Q9HC07 324 aa6.34□□□□□ -1.39
CXCR4-202ENST00000409817 IL36RNQ9UBH0 155 aa6.34□□□□□ -1.39
CXCR4-202ENST00000409817 CEP250Q9BV73 2442 aa6.34□□□□□ -1.4
CXCR4-202ENST00000409817 IFNL4K9M1U5 179 aa6.33□□□□□ -1.4
CXCR4-202ENST00000409817 SLC33A1O00400 549 aaPredicted RBP6.33□□□□□ -1.4
CXCR4-202ENST00000409817 HS3ST1O14792 307 aa6.33□□□□□ -1.4
CXCR4-202ENST00000409817 PTBP3O95758 552 aaKnown RBP6.33□□□□□ -1.4
CXCR4-202ENST00000409817 OR2H2O95918 312 aa6.33□□□□□ -1.4
CXCR4-202ENST00000409817 CRYAAP02489 173 aa6.33□□□□□ -1.4
CXCR4-202ENST00000409817 SCTP09683 121 aa6.33□□□□□ -1.4
CXCR4-202ENST00000409817 OR5AC1P0C628 307 aa6.33□□□□□ -1.4
CXCR4-202ENST00000409817 GLI4P10075 376 aa6.33□□□□□ -1.4
CXCR4-202ENST00000409817 ZNF250P15622 560 aa6.33□□□□□ -1.4
CXCR4-202ENST00000409817 DUSP1P28562 367 aa6.33□□□□□ -1.4
CXCR4-202ENST00000409817 GLRXP35754 106 aa6.33□□□□□ -1.4
CXCR4-202ENST00000409817 UCNP55089 124 aa6.33□□□□□ -1.4
CXCR4-202ENST00000409817 C6orf183Q5T699 404 aa6.33□□□□□ -1.4
CXCR4-202ENST00000409817 GGNBP1Q5YKI7 109 aa6.33□□□□□ -1.4
CXCR4-202ENST00000409817 ZNF474Q6S9Z5 364 aaPredicted RBP6.33□□□□□ -1.4
CXCR4-202ENST00000409817 ZNF497Q6ZNH5 498 aa6.33□□□□□ -1.4
CXCR4-202ENST00000409817 MRGPRGQ86SM5 289 aa6.33□□□□□ -1.4
CXCR4-202ENST00000409817 FAM90A1Q86YD7 464 aa6.33□□□□□ -1.4
CXCR4-202ENST00000409817 BATF2Q8N1L9 274 aa6.33□□□□□ -1.4
CXCR4-202ENST00000409817 OR10Z1Q8NGY1 313 aa6.33□□□□□ -1.4
CXCR4-202ENST00000409817 OR10J5Q8NHC4 309 aa6.33□□□□□ -1.4
CXCR4-202ENST00000409817 GLYATL2Q8WU03 294 aa6.33□□□□□ -1.4
CXCR4-202ENST00000409817 RDH5Q92781 318 aa6.33□□□□□ -1.4
CXCR4-202ENST00000409817 IL22RA2Q969J5 263 aa6.33□□□□□ -1.4
CXCR4-202ENST00000409817 MSI2Q96DH6 328 aaKnown RBP6.33□□□□□ -1.4
CXCR4-202ENST00000409817 C18orf12Q96KH6 178 aa6.33□□□□□ -1.4
CXCR4-202ENST00000409817 ZNF488Q96MN9 340 aa6.33□□□□□ -1.4
CXCR4-202ENST00000409817 TMEM56Q96MV1 263 aa6.33□□□□□ -1.4
CXCR4-202ENST00000409817 SPIN2AQ99865 258 aa6.33□□□□□ -1.4
CXCR4-202ENST00000409817 SPIN2BQ9BPZ2 258 aa6.33□□□□□ -1.4
CXCR4-202ENST00000409817 SCNM1Q9BWG6 230 aa6.33□□□□□ -1.4
CXCR4-202ENST00000409817 ZNF471Q9BX82 626 aaPredicted RBP6.33□□□□□ -1.4
CXCR4-202ENST00000409817 C1QTNF6Q9BXI9 259 aa6.33□□□□□ -1.4
CXCR4-202ENST00000409817 SHARPINQ9H0F6 387 aa6.33□□□□□ -1.4
CXCR4-202ENST00000409817 MBNL3Q9NUK0 354 aaKnown RBP6.33□□□□□ -1.4
CXCR4-202ENST00000409817 TAAR3PQ9P1P4 343 aa6.33□□□□□ -1.4
CXCR4-202ENST00000409817 TINAGQ9UJW2 476 aa6.33□□□□□ -1.4
CXCR4-202ENST00000409817 OR2W1Q9Y3N9 320 aa6.33□□□□□ -1.4
CXCR4-202ENST00000409817 WIPI2Q9Y4P8 454 aa6.33□□□□□ -1.4
CXCR4-202ENST00000409817 TMEM56-RWDD3S4R434 201 aa6.33□□□□□ -1.4
CXCR4-202ENST00000409817 SHANK1Q9Y566 2161 aa6.33□□□□□ -1.4
CXCR4-202ENST00000409817 FREM2Q5SZK8 3169 aa6.33□□□□□ -1.4
CXCR4-202ENST00000409817 C3orf85A0A1B0GTC6 90 aa6.32□□□□□ -1.4
CXCR4-202ENST00000409817 FAM90A27PA6NNH2 459 aa6.32□□□□□ -1.4
CXCR4-202ENST00000409817 A8MXE2 369 aa6.32□□□□□ -1.4
CXCR4-202ENST00000409817 F5H0A9 414 aaPredicted RBP6.32□□□□□ -1.4
CXCR4-202ENST00000409817 H0YIZ8 118 aa6.32□□□□□ -1.4
CXCR4-202ENST00000409817 BET1O15155 118 aa6.32□□□□□ -1.4
CXCR4-202ENST00000409817 MLNRO43193 412 aa6.32□□□□□ -1.4
CXCR4-202ENST00000409817 SPDEFO95238 335 aa6.32□□□□□ -1.4
CXCR4-202ENST00000409817 CDS2O95674 445 aa6.32□□□□□ -1.4
CXCR4-202ENST00000409817 HAND1O96004 215 aa6.32□□□□□ -1.4
CXCR4-202ENST00000409817 IGHV3-13P01766 116 aa6.32□□□□□ -1.4
CXCR4-202ENST00000409817 NMBP08949 121 aa6.32□□□□□ -1.4
CXCR4-202ENST00000409817 TPT1P13693 172 aaKnown RBP6.32□□□□□ -1.4
CXCR4-202ENST00000409817 GNRHRP30968 328 aa6.32□□□□□ -1.4
CXCR4-202ENST00000409817 CFHR2P36980 270 aa6.32□□□□□ -1.4
CXCR4-202ENST00000409817 CD200P41217 278 aa6.32□□□□□ -1.4
CXCR4-202ENST00000409817 TDGF1P3P51864 188 aa6.32□□□□□ -1.4
CXCR4-202ENST00000409817 PAX5Q02548 391 aa6.32□□□□□ -1.4
CXCR4-202ENST00000409817 RAB32Q13637 225 aa6.32□□□□□ -1.4
CXCR4-202ENST00000409817 ATXN7L3Q14CW9 347 aaPredicted RBP6.32□□□□□ -1.4
CXCR4-202ENST00000409817 HERPUD1Q15011 391 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms