RNA–Protein interactions for RNA: ENST00000409402.8

SPIRE1-202, Transcript of spire type actin nucleation factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPIRE1, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-202ENST00000409402 TRAV8-7A0A075B6U6 113 aa21.82■■□□□ 1.08
SPIRE1-202ENST00000409402 ICMTO60725 284 aa21.82■■□□□ 1.08
SPIRE1-202ENST00000409402 ZPLD1Q8TCW7 415 aa21.82■■□□□ 1.08
SPIRE1-202ENST00000409402 LOC101059948A0A1B0GTJ6 334 aa21.81■■□□□ 1.08
SPIRE1-202ENST00000409402 GZMMP51124 257 aa21.81■■□□□ 1.08
SPIRE1-202ENST00000409402 ZNF488Q96MN9 340 aa21.81■■□□□ 1.08
SPIRE1-202ENST00000409402 RNF115Q9Y4L5 304 aa21.81■■□□□ 1.08
SPIRE1-202ENST00000409402 TTRP02766 147 aa21.81■■□□□ 1.08
SPIRE1-202ENST00000409402 IFI6P09912 130 aa21.81■■□□□ 1.08
SPIRE1-202ENST00000409402 MGAT2Q10469 447 aa21.81■■□□□ 1.08
SPIRE1-202ENST00000409402 PCOLCEQ15113 449 aa21.81■■□□□ 1.08
SPIRE1-202ENST00000409402 OR1K1Q8NGR3 316 aa21.81■■□□□ 1.08
SPIRE1-202ENST00000409402 SCARF2Q96GP6 870 aaPredicted RBP21.81■■□□□ 1.08
SPIRE1-202ENST00000409402 LRRC37AA6NMS7 1700 aa21.81■■□□□ 1.08
SPIRE1-202ENST00000409402 RAB29O14966 203 aa21.81■■□□□ 1.08
SPIRE1-202ENST00000409402 ADAP1O75689 374 aa21.81■■□□□ 1.08
SPIRE1-202ENST00000409402 C11orf42Q8N5U0 333 aa21.81■■□□□ 1.08
SPIRE1-202ENST00000409402 ADIPOR1Q96A54 375 aa21.81■■□□□ 1.08
SPIRE1-202ENST00000409402 CHST1O43916 411 aa21.8■■□□□ 1.08
SPIRE1-202ENST00000409402 G6PCP35575 357 aa21.8■■□□□ 1.08
SPIRE1-202ENST00000409402 TRAPPC1Q9Y5R8 145 aa21.8■■□□□ 1.08
SPIRE1-202ENST00000409402 REG1BP48304 166 aa21.8■■□□□ 1.08
SPIRE1-202ENST00000409402 OR8I2Q8N0Y5 310 aa21.8■■□□□ 1.08
SPIRE1-202ENST00000409402 MARS2Q96GW9 593 aaKnown RBP21.8■■□□□ 1.08
SPIRE1-202ENST00000409402 INPP5JQ15735 1006 aaPredicted RBP21.8■■□□□ 1.08
SPIRE1-202ENST00000409402 OR4D10Q8NGI6 311 aa21.8■■□□□ 1.08
SPIRE1-202ENST00000409402 ITLN1Q8WWA0 313 aa21.8■■□□□ 1.08
SPIRE1-202ENST00000409402 PRSS27Q9BQR3 290 aa21.8■■□□□ 1.08
SPIRE1-202ENST00000409402 SLC2A9Q9NRM0 540 aa21.8■■□□□ 1.08
SPIRE1-202ENST00000409402 HOXA4Q00056 320 aaPredicted RBP21.8■■□□□ 1.08
SPIRE1-202ENST00000409402 RBPMS2Q6ZRY4 209 aaKnown RBP21.8■■□□□ 1.08
SPIRE1-202ENST00000409402 TDRD15B5MCY1 1934 aaKnown RBP21.8■■□□□ 1.08
SPIRE1-202ENST00000409402 Q9N2K0 584 aa21.8■■□□□ 1.08
SPIRE1-202ENST00000409402 PPP1CCP36873 323 aaKnown RBP21.79■■□□□ 1.08
SPIRE1-202ENST00000409402 LSM11P83369 360 aaKnown RBP eCLIP21.79■■□□□ 1.082e-9■■■■■ 40.5
SPIRE1-202ENST00000409402 IGKV3-7A0A075B6H7 116 aa21.79■■□□□ 1.08
SPIRE1-202ENST00000409402 MBPP02686 304 aaPredicted RBP21.79■■□□□ 1.08
SPIRE1-202ENST00000409402 DYRK2Q92630 601 aa21.79■■□□□ 1.08
SPIRE1-202ENST00000409402 RABAC1Q9UI14 185 aa21.79■■□□□ 1.08
SPIRE1-202ENST00000409402 A0A1W2PPE3 182 aa21.79■■□□□ 1.08
SPIRE1-202ENST00000409402 TCAPO15273 167 aa21.79■■□□□ 1.08
SPIRE1-202ENST00000409402 GAPDHP04406 335 aaKnown RBP21.79■■□□□ 1.08
SPIRE1-202ENST00000409402 CPN1P15169 458 aa21.79■■□□□ 1.08
SPIRE1-202ENST00000409402 TMEM33P57088 247 aa21.79■■□□□ 1.08
SPIRE1-202ENST00000409402 MRGPRFQ96AM1 343 aa21.79■■□□□ 1.08
SPIRE1-202ENST00000409402 GPA33Q99795 319 aa21.79■■□□□ 1.08
SPIRE1-202ENST00000409402 BRWD1Q9NSI6 2320 aa21.78■■□□□ 1.08
SPIRE1-202ENST00000409402 C19orf57Q0VDD7 668 aa21.78■■□□□ 1.08
SPIRE1-202ENST00000409402 FAM106CPP0CH98 169 aa21.78■■□□□ 1.08
SPIRE1-202ENST00000409402 LILRB1Q8NHL6 650 aaPredicted RBP21.78■■□□□ 1.08
SPIRE1-202ENST00000409402 ID1P41134 155 aa21.78■■□□□ 1.08
SPIRE1-202ENST00000409402 TPPP2P59282 170 aa21.78■■□□□ 1.08
SPIRE1-202ENST00000409402 RPL30P62888 115 aaKnown RBP21.78■■□□□ 1.08
SPIRE1-202ENST00000409402 SUMO1P63165 101 aaKnown RBP21.78■■□□□ 1.08
SPIRE1-202ENST00000409402 SLC35B1P78383 322 aa21.78■■□□□ 1.08
SPIRE1-202ENST00000409402 GCSAMQ8N6F7 178 aa21.78■■□□□ 1.08
SPIRE1-202ENST00000409402 PGLYRP3Q96LB9 341 aa21.78■■□□□ 1.08
SPIRE1-202ENST00000409402 CHODLQ9H9P2 273 aa21.78■■□□□ 1.08
SPIRE1-202ENST00000409402 APELAP0DMC3 54 aa21.78■■□□□ 1.08
SPIRE1-202ENST00000409402 CEACAM1P13688 526 aa21.78■■□□□ 1.08
SPIRE1-202ENST00000409402 RPEL1Q2QD12 228 aa21.77■■□□□ 1.08
SPIRE1-202ENST00000409402 PERPQ96FX8 193 aa21.77■■□□□ 1.08
SPIRE1-202ENST00000409402 KLHDC2Q9Y2U9 406 aa21.77■■□□□ 1.08
SPIRE1-202ENST00000409402 A0A1W2PNV4 684 aa21.77■■□□□ 1.08
SPIRE1-202ENST00000409402 NDUFA2O43678 99 aa21.77■■□□□ 1.08
SPIRE1-202ENST00000409402 MS4A3Q96HJ5 214 aa21.77■■□□□ 1.08
SPIRE1-202ENST00000409402 PRR13Q9NZ81 148 aa21.77■■□□□ 1.08
SPIRE1-202ENST00000409402 NAT8BQ9UHF3 227 aa21.77■■□□□ 1.08
SPIRE1-202ENST00000409402 CYB5R1Q9UHQ9 305 aa21.77■■□□□ 1.08
SPIRE1-202ENST00000409402 HTR1DP28221 377 aa21.77■■□□□ 1.08
SPIRE1-202ENST00000409402 GALR1P47211 349 aa21.77■■□□□ 1.08
SPIRE1-202ENST00000409402 FGF8P55075 233 aaPredicted RBP21.77■■□□□ 1.08
SPIRE1-202ENST00000409402 AANATQ16613 207 aa21.77■■□□□ 1.07
SPIRE1-202ENST00000409402 C10orf113Q5VZT2 155 aa21.77■■□□□ 1.07
SPIRE1-202ENST00000409402 SLC25A47Q6Q0C1 308 aa21.77■■□□□ 1.07
SPIRE1-202ENST00000409402 OR4X1Q8NH49 305 aa21.77■■□□□ 1.07
SPIRE1-202ENST00000409402 MANBALQ9NQG1 85 aa21.77■■□□□ 1.07
SPIRE1-202ENST00000409402 OR51B2Q9Y5P1 312 aa21.77■■□□□ 1.07
SPIRE1-202ENST00000409402 SLC2A8Q9NY64 477 aa21.76■■□□□ 1.07
SPIRE1-202ENST00000409402 KRTDAPP60985 99 aa21.76■■□□□ 1.07
SPIRE1-202ENST00000409402 SPCS3P61009 180 aa21.76■■□□□ 1.07
SPIRE1-202ENST00000409402 HILPDAQ9Y5L2 63 aa21.76■■□□□ 1.07
SPIRE1-202ENST00000409402 MARVELD1Q9BSK0 173 aa21.76■■□□□ 1.07
SPIRE1-202ENST00000409402 A0A1B0GU03 582 aa21.76■■□□□ 1.07
SPIRE1-202ENST00000409402 J3QR06 171 aa21.76■■□□□ 1.07
SPIRE1-202ENST00000409402 KIR3DL2P43630 455 aa21.76■■□□□ 1.07
SPIRE1-202ENST00000409402 ZNF561Q8N587 486 aa21.76■■□□□ 1.07
SPIRE1-202ENST00000409402 NPAS1Q99742 590 aa21.76■■□□□ 1.07
SPIRE1-202ENST00000409402 VSIG4Q9Y279 399 aa21.76■■□□□ 1.07
SPIRE1-202ENST00000409402 NRXN2Q9P2S2 1712 aa21.76■■□□□ 1.07
SPIRE1-202ENST00000409402 ARFGEF1Q9Y6D6 1849 aa21.75■■□□□ 1.07
SPIRE1-202ENST00000409402 PTTG1IPP53801 180 aa21.75■■□□□ 1.07
SPIRE1-202ENST00000409402 P2RX4Q99571 388 aa21.75■■□□□ 1.07
SPIRE1-202ENST00000409402 ST6GALNAC2Q9UJ37 374 aa21.75■■□□□ 1.07
SPIRE1-202ENST00000409402 DLL1O00548 723 aa21.75■■□□□ 1.07
SPIRE1-202ENST00000409402 NPY1RP25929 384 aa21.75■■□□□ 1.07
SPIRE1-202ENST00000409402 ATP5J2P56134 94 aa21.75■■□□□ 1.07
SPIRE1-202ENST00000409402 FAM78BQ5VT40 261 aa21.75■■□□□ 1.07
SPIRE1-202ENST00000409402 NSUN5P2Q63ZY6 315 aa21.75■■□□□ 1.07
SPIRE1-202ENST00000409402 PSG5Q15238 335 aa21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms