RNA–Protein interactions for RNA: ENST00000407595.2

CCDC85A-201, Transcript of coiled-coil domain containing 85A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC85A, Length 3,982 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85A-201ENST00000407595 SLC35G3Q8N808 338 aa13.63□□□□□ -0.23
CCDC85A-201ENST00000407595 OPA3Q9H6K4 179 aa13.63□□□□□ -0.23
CCDC85A-201ENST00000407595 KCNIP1Q9NZI2 227 aa13.63□□□□□ -0.23
CCDC85A-201ENST00000407595 C3orf85A0A1B0GTC6 90 aa13.63□□□□□ -0.23
CCDC85A-201ENST00000407595 OR6C6A6NF89 314 aa13.63□□□□□ -0.23
CCDC85A-201ENST00000407595 ZNF154Q13106 437 aa13.63□□□□□ -0.23
CCDC85A-201ENST00000407595 IL13RA2Q14627 380 aa13.63□□□□□ -0.23
CCDC85A-201ENST00000407595 UBE2V2Q15819 145 aa13.63□□□□□ -0.23
CCDC85A-201ENST00000407595 TBC1D28Q2M2D7 210 aa13.63□□□□□ -0.23
CCDC85A-201ENST00000407595 ZNF880Q6PDB4 577 aa13.63□□□□□ -0.23
CCDC85A-201ENST00000407595 ZNF600Q6ZNG1 722 aa13.63□□□□□ -0.23
CCDC85A-201ENST00000407595 CXorf65A6NEN9 183 aa13.62□□□□□ -0.23
CCDC85A-201ENST00000407595 WDR1O75083 606 aa13.62□□□□□ -0.23
CCDC85A-201ENST00000407595 DFFBO76075 338 aa13.62□□□□□ -0.23
CCDC85A-201ENST00000407595 IGHV3-13P01766 116 aa13.62□□□□□ -0.23
CCDC85A-201ENST00000407595 IGHV3-7P01780 117 aa13.62□□□□□ -0.23
CCDC85A-201ENST00000407595 PGA4P0DJD7 388 aa13.62□□□□□ -0.23
CCDC85A-201ENST00000407595 PGA3P0DJD8 388 aa13.62□□□□□ -0.23
CCDC85A-201ENST00000407595 ZNF66Q6ZN08 573 aa13.62□□□□□ -0.23
CCDC85A-201ENST00000407595 CLDN34H7C241 214 aa13.62□□□□□ -0.23
CCDC85A-201ENST00000407595 NDUFS6O75380 124 aaKnown RBP13.62□□□□□ -0.23
CCDC85A-201ENST00000407595 AGFG2O95081 481 aa13.62□□□□□ -0.23
CCDC85A-201ENST00000407595 HLA-DRB3P79483 266 aa13.62□□□□□ -0.23
CCDC85A-201ENST00000407595 ASPHD2Q6ICH7 369 aa13.62□□□□□ -0.23
CCDC85A-201ENST00000407595 ANGPTL4Q9BY76 406 aa13.62□□□□□ -0.23
CCDC85A-201ENST00000407595 GPR27Q9NS67 375 aa13.62□□□□□ -0.23
CCDC85A-201ENST00000407595 LTBP2Q14767 1821 aa13.62□□□□□ -0.23
CCDC85A-201ENST00000407595 COL4A4P53420 1690 aaPredicted RBP13.62□□□□□ -0.23
CCDC85A-201ENST00000407595 TGIF2-C20orf24A0A0A6YYL0 155 aa13.62□□□□□ -0.23
CCDC85A-201ENST00000407595 C9orf172C9J069 976 aa13.62□□□□□ -0.23
CCDC85A-201ENST00000407595 CLPSP04118 112 aa13.62□□□□□ -0.23
CCDC85A-201ENST00000407595 MMP9P14780 707 aa13.62□□□□□ -0.23
CCDC85A-201ENST00000407595 SARAFQ96BY9 339 aa13.62□□□□□ -0.23
CCDC85A-201ENST00000407595 GPR87Q9BY21 358 aa13.62□□□□□ -0.23
CCDC85A-201ENST00000407595 CHRNA10Q9GZZ6 450 aa13.62□□□□□ -0.23
CCDC85A-201ENST00000407595 PATZ1Q9HBE1 687 aaKnown RBP13.62□□□□□ -0.23
CCDC85A-201ENST00000407595 PPP1R3CQ9UQK1 317 aa13.62□□□□□ -0.23
CCDC85A-201ENST00000407595 TUSC2O75896 110 aa13.61□□□□□ -0.23
CCDC85A-201ENST00000407595 BTNL8Q6UX41 500 aa13.61□□□□□ -0.23
CCDC85A-201ENST00000407595 TRAV17A0A0B4J275 112 aa13.61□□□□□ -0.23
CCDC85A-201ENST00000407595 A0A1B0GV90 55 aa13.61□□□□□ -0.23
CCDC85A-201ENST00000407595 CHST1O43916 411 aa13.61□□□□□ -0.23
CCDC85A-201ENST00000407595 FNDC7Q5VTL7 733 aa13.61□□□□□ -0.23
CCDC85A-201ENST00000407595 TREM2Q9NZC2 230 aa13.61□□□□□ -0.23
CCDC85A-201ENST00000407595 C5orf52A6NGY3 159 aa13.61□□□□□ -0.23
CCDC85A-201ENST00000407595 SUCLG1P53597 346 aaKnown RBP13.61□□□□□ -0.23
CCDC85A-201ENST00000407595 BSCL2Q96G97 398 aaPredicted RBP13.61□□□□□ -0.23
CCDC85A-201ENST00000407595 IMMP1LQ96LU5 166 aa13.61□□□□□ -0.23
CCDC85A-201ENST00000407595 PACRGQ96M98 296 aaPredicted RBP13.61□□□□□ -0.23
CCDC85A-201ENST00000407595 ZNF816-ZNF321PA0A0X1KG74 233 aa13.6□□□□□ -0.23
CCDC85A-201ENST00000407595 M0R1B8 84 aa13.6□□□□□ -0.23
CCDC85A-201ENST00000407595 GATCO43716 136 aaKnown RBP13.6□□□□□ -0.23
CCDC85A-201ENST00000407595 SP1P08047 785 aa13.6□□□□□ -0.23
CCDC85A-201ENST00000407595 DANCRP0C864 163 aa13.6□□□□□ -0.23
CCDC85A-201ENST00000407595 HBG1P69891 147 aa13.6□□□□□ -0.23
CCDC85A-201ENST00000407595 HBG2P69892 147 aa13.6□□□□□ -0.23
CCDC85A-201ENST00000407595 RAB35Q15286 201 aa13.6□□□□□ -0.23
CCDC85A-201ENST00000407595 EXTL1Q92935 676 aa13.6□□□□□ -0.23
CCDC85A-201ENST00000407595 RNF150Q9ULK6 438 aa13.6□□□□□ -0.23
CCDC85A-201ENST00000407595 PTPRQQ9UMZ3 2332 aa13.6□□□□□ -0.23
CCDC85A-201ENST00000407595 A0A0A6YYD4 124 aa13.6□□□□□ -0.23
CCDC85A-201ENST00000407595 METTL15P1P0C7V9 234 aa13.6□□□□□ -0.23
CCDC85A-201ENST00000407595 ZNF83P51522 516 aa13.6□□□□□ -0.23
CCDC85A-201ENST00000407595 RAB4BP61018 213 aa13.6□□□□□ -0.23
CCDC85A-201ENST00000407595 SUPT4H1P63272 117 aaKnown RBP13.6□□□□□ -0.23
CCDC85A-201ENST00000407595 WFDC8Q8IUA0 241 aa13.6□□□□□ -0.23
CCDC85A-201ENST00000407595 GPR35Q9HC97 309 aa13.6□□□□□ -0.23
CCDC85A-201ENST00000407595 TUBG2Q9NRH3 451 aa13.6□□□□□ -0.23
CCDC85A-201ENST00000407595 FCGR3AP08637 254 aa13.6□□□□□ -0.23
CCDC85A-201ENST00000407595 FUT3P21217 361 aa13.6□□□□□ -0.23
CCDC85A-201ENST00000407595 RND3P61587 244 aa13.6□□□□□ -0.23
CCDC85A-201ENST00000407595 H3F3AP84243 136 aa13.6□□□□□ -0.23
CCDC85A-201ENST00000407595 SRSF6Q13247 344 aaKnown RBP13.6□□□□□ -0.23
CCDC85A-201ENST00000407595 ZNF488Q96MN9 340 aa13.6□□□□□ -0.23
CCDC85A-201ENST00000407595 TMEM100Q9NV29 134 aa13.6□□□□□ -0.23
CCDC85A-201ENST00000407595 PCNX3Q9H6A9 2034 aa13.59□□□□□ -0.23
CCDC85A-201ENST00000407595 DEGS1O15121 323 aa13.59□□□□□ -0.23
CCDC85A-201ENST00000407595 ZIC3O60481 467 aa13.59□□□□□ -0.23
CCDC85A-201ENST00000407595 MMP7P09237 267 aaPredicted RBP13.59□□□□□ -0.23
CCDC85A-201ENST00000407595 RNF224P0DH78 156 aa13.59□□□□□ -0.23
CCDC85A-201ENST00000407595 COL19A1Q14993 1142 aa13.59□□□□□ -0.23
CCDC85A-201ENST00000407595 OR8G1Q15617 311 aa13.59□□□□□ -0.23
CCDC85A-201ENST00000407595 SNAI3Q3KNW1 292 aa13.59□□□□□ -0.23
CCDC85A-201ENST00000407595 CXorf66Q5JRM2 361 aaPredicted RBP13.59□□□□□ -0.23
CCDC85A-201ENST00000407595 NCR3LG1Q68D85 454 aa13.59□□□□□ -0.23
CCDC85A-201ENST00000407595 OR4F5Q8NH21 305 aa13.59□□□□□ -0.23
CCDC85A-201ENST00000407595 OR4F4Q96R69 305 aa13.59□□□□□ -0.23
CCDC85A-201ENST00000407595 OSGIN2Q9Y236 505 aa13.59□□□□□ -0.23
CCDC85A-201ENST00000407595 OR5H1A6NKK0 313 aa13.59□□□□□ -0.23
CCDC85A-201ENST00000407595 ERVS71-1P61550 626 aa13.59□□□□□ -0.23
CCDC85A-201ENST00000407595 TMEM41BQ5BJD5 291 aa13.59□□□□□ -0.23
CCDC85A-201ENST00000407595 ZNF808Q8N4W9 903 aaPredicted RBP13.59□□□□□ -0.23
CCDC85A-201ENST00000407595 OR10AD1Q8NGE0 317 aa13.59□□□□□ -0.23
CCDC85A-201ENST00000407595 RFESDQ8TAC1 157 aa13.59□□□□□ -0.23
CCDC85A-201ENST00000407595 NTNG2Q96CW9 530 aa13.59□□□□□ -0.23
CCDC85A-201ENST00000407595 ABHD14AQ9BUJ0 271 aa13.59□□□□□ -0.23
CCDC85A-201ENST00000407595 ZNF319Q9P2F9 582 aa13.59□□□□□ -0.23
CCDC85A-201ENST00000407595 PSG4Q00888 419 aa13.59□□□□□ -0.23
CCDC85A-201ENST00000407595 BAXQ07812 192 aa13.59□□□□□ -0.23
CCDC85A-201ENST00000407595 MST1LQ2TV78 715 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms