RNA–Protein interactions for RNA: ENST00000399903.6

PTPRA-205, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5 BASIC

Gene PTPRA, Length 3,337 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-205ENST00000399903 TRA2AQ13595 282 aaKnown RBP eCLIP14.74□□□□□ -0.05
PTPRA-205ENST00000399903 TBC1D26Q86UD7 250 aa14.74□□□□□ -0.05
PTPRA-205ENST00000399903 ZNF100Q8IYN0 542 aa14.74□□□□□ -0.05
PTPRA-205ENST00000399903 LYZL4Q96KX0 146 aa14.74□□□□□ -0.05
PTPRA-205ENST00000399903 MSL2Q9HCI7 577 aa14.74□□□□□ -0.05
PTPRA-205ENST00000399903 RAB4AP20338 218 aa14.73□□□□□ -0.05
PTPRA-205ENST00000399903 ZNF41P51814 821 aaPredicted RBP14.73□□□□□ -0.05
PTPRA-205ENST00000399903 DCAF7P61962 342 aa14.73□□□□□ -0.05
PTPRA-205ENST00000399903 PNRC1Q12796 327 aaPredicted RBP14.73□□□□□ -0.05
PTPRA-205ENST00000399903 MS4A10Q96PG2 267 aa14.73□□□□□ -0.05
PTPRA-205ENST00000399903 ZNF286AQ9HBT8 521 aa14.73□□□□□ -0.05
PTPRA-205ENST00000399903 LYRM2Q9NU23 88 aaPredicted RBP14.73□□□□□ -0.05
PTPRA-205ENST00000399903 KLRF1Q9NZS2 232 aa14.73□□□□□ -0.05
PTPRA-205ENST00000399903 TRBV24-1A0A075B6N3 115 aa14.73□□□□□ -0.05
PTPRA-205ENST00000399903 MPPED1O15442 326 aa14.73□□□□□ -0.05
PTPRA-205ENST00000399903 SPINK2P20155 84 aa14.73□□□□□ -0.05
PTPRA-205ENST00000399903 RPP30P78346 268 aaKnown RBP14.73□□□□□ -0.05
PTPRA-205ENST00000399903 CDH20Q9HBT6 801 aa14.73□□□□□ -0.05
PTPRA-205ENST00000399903 PARD6AQ9NPB6 346 aa14.73□□□□□ -0.05
PTPRA-205ENST00000399903 PPIAL4AQ9Y536 164 aa14.73□□□□□ -0.05
PTPRA-205ENST00000399903 LRRC3CA6NJW4 275 aa14.72□□□□□ -0.05
PTPRA-205ENST00000399903 METTL15P1P0C7V9 234 aa14.72□□□□□ -0.05
PTPRA-205ENST00000399903 SELEP16581 610 aa14.72□□□□□ -0.05
PTPRA-205ENST00000399903 BSXQ3C1V8 233 aa14.72□□□□□ -0.05
PTPRA-205ENST00000399903 P4HTMQ9NXG6 502 aa14.72□□□□□ -0.05
PTPRA-205ENST00000399903 A0A1W2PNV4 684 aa14.72□□□□□ -0.05
PTPRA-205ENST00000399903 IFI6P09912 130 aa14.72□□□□□ -0.05
PTPRA-205ENST00000399903 TMEM256Q8N2U0 113 aa14.72□□□□□ -0.05
PTPRA-205ENST00000399903 OR1N1Q8NGS0 311 aa14.72□□□□□ -0.05
PTPRA-205ENST00000399903 OR51H1Q8NH63 302 aa14.72□□□□□ -0.05
PTPRA-205ENST00000399903 DDIT4LQ96D03 193 aa14.72□□□□□ -0.05
PTPRA-205ENST00000399903 RBM24Q9BX46 236 aaKnown RBP14.72□□□□□ -0.05
PTPRA-205ENST00000399903 RIMS4Q9H426 269 aaPredicted RBP14.72□□□□□ -0.05
PTPRA-205ENST00000399903 MOB1AQ9H8S9 216 aa14.72□□□□□ -0.05
PTPRA-205ENST00000399903 PLEK2Q9NYT0 353 aa14.72□□□□□ -0.05
PTPRA-205ENST00000399903 POLR3KQ9Y2Y1 108 aaPredicted RBP14.72□□□□□ -0.05
PTPRA-205ENST00000399903 TRDCB7Z8K6 153 aa14.72□□□□□ -0.05
PTPRA-205ENST00000399903 IGHMP01871 453 aa14.72□□□□□ -0.05
PTPRA-205ENST00000399903 RND2P52198 227 aa14.72□□□□□ -0.05
PTPRA-205ENST00000399903 ZNF133P52736 654 aaPredicted RBP14.72□□□□□ -0.05
PTPRA-205ENST00000399903 TAS2R30P59541 319 aa14.72□□□□□ -0.05
PTPRA-205ENST00000399903 SSX7Q7RTT5 188 aa14.72□□□□□ -0.05
PTPRA-205ENST00000399903 RCC1LQ96I51 464 aaKnown RBP14.72□□□□□ -0.05
PTPRA-205ENST00000399903 SPIN2AQ99865 258 aa14.72□□□□□ -0.05
PTPRA-205ENST00000399903 SPIN2BQ9BPZ2 258 aa14.72□□□□□ -0.05
PTPRA-205ENST00000399903 PATZ1Q9HBE1 687 aaKnown RBP14.72□□□□□ -0.05
PTPRA-205ENST00000399903 PPP1R14DQ9NXH3 145 aa14.72□□□□□ -0.05
PTPRA-205ENST00000399903 V9GYS6 101 aa14.72□□□□□ -0.05
PTPRA-205ENST00000399903 TSPAN2O60636 221 aa14.71□□□□□ -0.05
PTPRA-205ENST00000399903 ZNF92Q03936 586 aa14.71□□□□□ -0.05
PTPRA-205ENST00000399903 TMEM241Q24JQ0 296 aa14.71□□□□□ -0.05
PTPRA-205ENST00000399903 THEM4Q5T1C6 240 aa14.71□□□□□ -0.05
PTPRA-205ENST00000399903 ZNF774Q6NX45 483 aa14.71□□□□□ -0.05
PTPRA-205ENST00000399903 DNASE2BQ8WZ79 361 aa14.71□□□□□ -0.05
PTPRA-205ENST00000399903 LHX4Q969G2 390 aa14.71□□□□□ -0.05
PTPRA-205ENST00000399903 Q9N2K0 584 aa14.71□□□□□ -0.05
PTPRA-205ENST00000399903 NAGKQ9UJ70 344 aa14.71□□□□□ -0.05
PTPRA-205ENST00000399903 RPS16P62249 146 aaKnown RBP14.71□□□□□ -0.05
PTPRA-205ENST00000399903 ZFP36L1Q07352 338 aaKnown RBP14.71□□□□□ -0.05
PTPRA-205ENST00000399903 TDRG1Q3Y452 100 aa14.71□□□□□ -0.05
PTPRA-205ENST00000399903 RNASEH2CQ8TDP1 164 aaKnown RBP14.71□□□□□ -0.05
PTPRA-205ENST00000399903 ZNF737O75373 536 aa14.71□□□□□ -0.06
PTPRA-205ENST00000399903 SCRG1O75711 98 aa14.71□□□□□ -0.06
PTPRA-205ENST00000399903 HPRT1P00492 218 aa14.71□□□□□ -0.06
PTPRA-205ENST00000399903 PPYP01298 95 aa14.71□□□□□ -0.06
PTPRA-205ENST00000399903 UCP3P55916 312 aa14.71□□□□□ -0.06
PTPRA-205ENST00000399903 LYSMD4Q5XG99 296 aa14.71□□□□□ -0.06
PTPRA-205ENST00000399903 TIPARPQ7Z3E1 657 aaKnown RBP14.71□□□□□ -0.06
PTPRA-205ENST00000399903 Q96M66 194 aa14.71□□□□□ -0.06
PTPRA-205ENST00000399903 ATP5SQ99766 215 aa14.71□□□□□ -0.06
PTPRA-205ENST00000399903 TUBG2Q9NRH3 451 aa14.71□□□□□ -0.06
PTPRA-205ENST00000399903 SLC7A10Q9NS82 523 aa14.71□□□□□ -0.06
PTPRA-205ENST00000399903 ST3GAL6Q9Y274 331 aa14.71□□□□□ -0.06
PTPRA-205ENST00000399903 GRIFINA4D1Z8 144 aa14.7□□□□□ -0.06
PTPRA-205ENST00000399903 SIAH2O43255 324 aa14.7□□□□□ -0.06
PTPRA-205ENST00000399903 ZNHIT1O43257 154 aa14.7□□□□□ -0.06
PTPRA-205ENST00000399903 CA11O75493 328 aa14.7□□□□□ -0.06
PTPRA-205ENST00000399903 PAX1P15863 534 aa14.7□□□□□ -0.06
PTPRA-205ENST00000399903 ZNF16P17020 682 aaPredicted RBP14.7□□□□□ -0.06
PTPRA-205ENST00000399903 ETFRF1Q6IPR1 90 aa14.7□□□□□ -0.06
PTPRA-205ENST00000399903 OR4F5Q8NH21 305 aa14.7□□□□□ -0.06
PTPRA-205ENST00000399903 OR4F4Q96R69 305 aa14.7□□□□□ -0.06
PTPRA-205ENST00000399903 OR51I2Q9H344 312 aa14.7□□□□□ -0.06
PTPRA-205ENST00000399903 OCIAD1Q9NX40 245 aa14.7□□□□□ -0.06
PTPRA-205ENST00000399903 MAP1LC3B2A6NCE7 125 aa14.7□□□□□ -0.06
PTPRA-205ENST00000399903 CELA2AP08217 269 aa14.7□□□□□ -0.06
PTPRA-205ENST00000399903 GAPTQ8N292 157 aa14.7□□□□□ -0.06
PTPRA-205ENST00000399903 NOXO1Q8NFA2 376 aa14.7□□□□□ -0.06
PTPRA-205ENST00000399903 MAP1LC3BQ9GZQ8 125 aa14.7□□□□□ -0.06
PTPRA-205ENST00000399903 SLC39A9Q9NUM3 307 aa14.7□□□□□ -0.06
PTPRA-205ENST00000399903 VAX2Q9UIW0 290 aa14.7□□□□□ -0.06
PTPRA-205ENST00000399903 EP300Q09472 2414 aaPredicted RBP14.7□□□□□ -0.06
PTPRA-205ENST00000399903 TRBV11-1A0A0K0K1C0 115 aa14.69□□□□□ -0.06
PTPRA-205ENST00000399903 ZNF320A2RRD8 509 aa14.69□□□□□ -0.06
PTPRA-205ENST00000399903 ZNF732B4DXR9 585 aa14.69□□□□□ -0.06
PTPRA-205ENST00000399903 ZNF814B7Z6K7 855 aa14.69□□□□□ -0.06
PTPRA-205ENST00000399903 RRP8O43159 456 aaKnown RBP14.69□□□□□ -0.06
PTPRA-205ENST00000399903 DHRS3O75911 302 aa14.69□□□□□ -0.06
PTPRA-205ENST00000399903 CEACAM6P40199 344 aa14.69□□□□□ -0.06
PTPRA-205ENST00000399903 HLA-BQ31612 363 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms