RNA–Protein interactions for RNA: ENST00000399084.5

HLA-DQB1-204, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQB1, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-204ENST00000399084 NKX2-1P43699 371 aaPredicted RBP15.03■□□□□ -0
HLA-DQB1-204ENST00000399084 FAM209AQ5JX71 171 aa15.03■□□□□ -0
HLA-DQB1-204ENST00000399084 WDR86Q86TI4 376 aa15.03■□□□□ -0
HLA-DQB1-204ENST00000399084 MYPOPQ86VE0 399 aaPredicted RBP15.03■□□□□ -0
HLA-DQB1-204ENST00000399084 SPAG16Q8N0X2 631 aa15.03■□□□□ -0
HLA-DQB1-204ENST00000399084 BATF2Q8N1L9 274 aa15.03■□□□□ -0
HLA-DQB1-204ENST00000399084 LHFPL5Q8TAF8 219 aa15.03■□□□□ -0
HLA-DQB1-204ENST00000399084 SLC25A31Q9H0C2 315 aa15.03■□□□□ -0
HLA-DQB1-204ENST00000399084 DKK4Q9UBT3 224 aa15.03■□□□□ -0
HLA-DQB1-204ENST00000399084 SPEF1Q9Y4P9 236 aa15.03■□□□□ -0
HLA-DQB1-204ENST00000399084 IFNL4K9M1U5 179 aa15.02□□□□□ -0.01
HLA-DQB1-204ENST00000399084 TNFSF13O75888 250 aa15.02□□□□□ -0.01
HLA-DQB1-204ENST00000399084 GCH1P30793 250 aa15.02□□□□□ -0.01
HLA-DQB1-204ENST00000399084 PJVKQ0ZLH3 352 aa15.02□□□□□ -0.01
HLA-DQB1-204ENST00000399084 MSMO1Q15800 293 aa15.02□□□□□ -0.01
HLA-DQB1-204ENST00000399084 VWA1Q6PCB0 445 aa15.02□□□□□ -0.01
HLA-DQB1-204ENST00000399084 MEX3BQ6ZN04 569 aaKnown RBP15.02□□□□□ -0.01
HLA-DQB1-204ENST00000399084 COMMD1Q8N668 190 aa15.02□□□□□ -0.01
HLA-DQB1-204ENST00000399084 ZBTB34Q8NCN2 500 aa15.02□□□□□ -0.01
HLA-DQB1-204ENST00000399084 STARD4Q96DR4 205 aa15.02□□□□□ -0.01
HLA-DQB1-204ENST00000399084 TMEM218A2RU14 115 aa15.01□□□□□ -0.01
HLA-DQB1-204ENST00000399084 OR5H1A6NKK0 313 aa15.01□□□□□ -0.01
HLA-DQB1-204ENST00000399084 HSPB6O14558 160 aa15.01□□□□□ -0.01
HLA-DQB1-204ENST00000399084 CDIPTO14735 213 aa15.01□□□□□ -0.01
HLA-DQB1-204ENST00000399084 ZNHIT1O43257 154 aa15.01□□□□□ -0.01
HLA-DQB1-204ENST00000399084 NOVA1P51513 510 aaKnown RBP15.01□□□□□ -0.01
HLA-DQB1-204ENST00000399084 TAGLNQ01995 201 aaKnown RBP15.01□□□□□ -0.01
HLA-DQB1-204ENST00000399084 HMGN3Q15651 99 aa15.01□□□□□ -0.01
HLA-DQB1-204ENST00000399084 KRTCAP3Q53RY4 240 aa15.01□□□□□ -0.01
HLA-DQB1-204ENST00000399084 NMSQ5H8A3 153 aa15.01□□□□□ -0.01
HLA-DQB1-204ENST00000399084 C20orf204Q6ZNR8 217 aa15.01□□□□□ -0.01
HLA-DQB1-204ENST00000399084 BPIFCQ8NFQ6 507 aa15.01□□□□□ -0.01
HLA-DQB1-204ENST00000399084 OR10V1Q8NGI7 309 aa15.01□□□□□ -0.01
HLA-DQB1-204ENST00000399084 TAAR6Q96RI8 345 aa15.01□□□□□ -0.01
HLA-DQB1-204ENST00000399084 USB1Q9BQ65 265 aaKnown RBP15.01□□□□□ -0.01
HLA-DQB1-204ENST00000399084 GINS3Q9BRX5 216 aa15.01□□□□□ -0.01
HLA-DQB1-204ENST00000399084 CCL28Q9NRJ3 127 aa15.01□□□□□ -0.01
HLA-DQB1-204ENST00000399084 KCNIP1Q9NZI2 227 aa15.01□□□□□ -0.01
HLA-DQB1-204ENST00000399084 TRAPPC2LQ9UL33 140 aa15.01□□□□□ -0.01
HLA-DQB1-204ENST00000399084 CACNA1GO43497 2377 aa15.01□□□□□ -0.01
HLA-DQB1-204ENST00000399084 IGKV1D-13A0A0B4J2D9 117 aa15□□□□□ -0.01
HLA-DQB1-204ENST00000399084 A0A1B0GU03 582 aa15□□□□□ -0.01
HLA-DQB1-204ENST00000399084 IGKV1-13P0DP09 117 aa15□□□□□ -0.01
HLA-DQB1-204ENST00000399084 F2RL1P55085 397 aa15□□□□□ -0.01
HLA-DQB1-204ENST00000399084 ID3Q02535 119 aa15□□□□□ -0.01
HLA-DQB1-204ENST00000399084 SLC35E4Q6ICL7 350 aa15□□□□□ -0.01
HLA-DQB1-204ENST00000399084 BHLHA15Q7RTS1 189 aaPredicted RBP15□□□□□ -0.01
HLA-DQB1-204ENST00000399084 DMBX1Q8NFW5 382 aa15□□□□□ -0.01
HLA-DQB1-204ENST00000399084 OR52M1Q8NGK5 317 aa15□□□□□ -0.01
HLA-DQB1-204ENST00000399084 LSM10Q969L4 123 aaKnown RBP15□□□□□ -0.01
HLA-DQB1-204ENST00000399084 TOLLIPQ9H0E2 274 aa15□□□□□ -0.01
HLA-DQB1-204ENST00000399084 PLEKHF2Q9H8W4 249 aa15□□□□□ -0.01
HLA-DQB1-204ENST00000399084 ERRFI1Q9UJM3 462 aaPredicted RBP15□□□□□ -0.01
HLA-DQB1-204ENST00000399084 TMEM30CPA0ZSE6 113 aa15□□□□□ -0.01
HLA-DQB1-204ENST00000399084 NKX2-6A6NCS4 301 aa15□□□□□ -0.01
HLA-DQB1-204ENST00000399084 RNF212BA8MTL3 300 aa15□□□□□ -0.01
HLA-DQB1-204ENST00000399084 HEXAP06865 529 aa15□□□□□ -0.01
HLA-DQB1-204ENST00000399084 RCC1P18754 421 aaPredicted RBP15□□□□□ -0.01
HLA-DQB1-204ENST00000399084 TIMP3P35625 211 aa15□□□□□ -0.01
HLA-DQB1-204ENST00000399084 PAX5Q02548 391 aa15□□□□□ -0.01
HLA-DQB1-204ENST00000399084 BAXQ07812 192 aa15□□□□□ -0.01
HLA-DQB1-204ENST00000399084 ZNF266Q14584 549 aa15□□□□□ -0.01
HLA-DQB1-204ENST00000399084 CXorf67Q86X51 503 aaPredicted RBP15□□□□□ -0.01
HLA-DQB1-204ENST00000399084 OR2C3Q8N628 320 aa15□□□□□ -0.01
HLA-DQB1-204ENST00000399084 ZNF610Q8N9Z0 462 aa15□□□□□ -0.01
HLA-DQB1-204ENST00000399084 LYPD6BQ8NI32 183 aa15□□□□□ -0.01
HLA-DQB1-204ENST00000399084 FAM216AQ8WUB2 273 aa15□□□□□ -0.01
HLA-DQB1-204ENST00000399084 C11orf1Q9H5F2 150 aa15□□□□□ -0.01
HLA-DQB1-204ENST00000399084 DMDP11532 3685 aa14.99□□□□□ -0.01
HLA-DQB1-204ENST00000399084 A0A1W2PR80 420 aa14.99□□□□□ -0.01
HLA-DQB1-204ENST00000399084 HAND1O96004 215 aa14.99□□□□□ -0.01
HLA-DQB1-204ENST00000399084 APOC3P02656 99 aa14.99□□□□□ -0.01
HLA-DQB1-204ENST00000399084 SERPINE2P07093 398 aa14.99□□□□□ -0.01
HLA-DQB1-204ENST00000399084 CECR9P0C854 216 aa14.99□□□□□ -0.01
HLA-DQB1-204ENST00000399084 CAV2P51636 162 aa14.99□□□□□ -0.01
HLA-DQB1-204ENST00000399084 SWI5Q1ZZU3 235 aa14.99□□□□□ -0.01
HLA-DQB1-204ENST00000399084 TIMM23BQ5SRD1 257 aa14.99□□□□□ -0.01
HLA-DQB1-204ENST00000399084 C10orf91Q5T1B1 145 aa14.99□□□□□ -0.01
HLA-DQB1-204ENST00000399084 FAM90A1Q86YD7 464 aa14.99□□□□□ -0.01
HLA-DQB1-204ENST00000399084 STRAPQ9Y3F4 350 aaKnown RBP14.99□□□□□ -0.01
HLA-DQB1-204ENST00000399084 HSD17B6O14756 317 aa14.98□□□□□ -0.01
HLA-DQB1-204ENST00000399084 TIMM8AO60220 97 aaPredicted RBP14.98□□□□□ -0.01
HLA-DQB1-204ENST00000399084 SCO1O75880 301 aa14.98□□□□□ -0.01
HLA-DQB1-204ENST00000399084 MPV17P39210 176 aa14.98□□□□□ -0.01
HLA-DQB1-204ENST00000399084 ERVS71-1P61550 626 aa14.98□□□□□ -0.01
HLA-DQB1-204ENST00000399084 PXDC1Q5TGL8 231 aa14.98□□□□□ -0.01
HLA-DQB1-204ENST00000399084 SVBPQ8N300 66 aa14.98□□□□□ -0.01
HLA-DQB1-204ENST00000399084 RCL1Q9Y2P8 373 aaKnown RBP14.98□□□□□ -0.01
HLA-DQB1-204ENST00000399084 TMA7Q9Y2S6 64 aaKnown RBP14.98□□□□□ -0.01
HLA-DQB1-204ENST00000399084 SLC25A15Q9Y619 301 aa14.98□□□□□ -0.01
HLA-DQB1-204ENST00000399084 DOCK7Q96N67 2140 aa14.98□□□□□ -0.01
HLA-DQB1-204ENST00000399084 WDFY4Q6ZS81 3184 aa14.98□□□□□ -0.01
HLA-DQB1-204ENST00000399084 IGHV2OR16-5A0A0B4J2B6 119 aa14.97□□□□□ -0.01
HLA-DQB1-204ENST00000399084 SIRPB1O00241 398 aa14.97□□□□□ -0.01
HLA-DQB1-204ENST00000399084 ATG12O94817 140 aa14.97□□□□□ -0.01
HLA-DQB1-204ENST00000399084 GRPP07492 148 aa14.97□□□□□ -0.01
HLA-DQB1-204ENST00000399084 GLI4P10075 376 aa14.97□□□□□ -0.01
HLA-DQB1-204ENST00000399084 SPP1P10451 314 aa14.97□□□□□ -0.01
HLA-DQB1-204ENST00000399084 CFHR2P36980 270 aa14.97□□□□□ -0.01
HLA-DQB1-204ENST00000399084 VAMP2P63027 116 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms