RNA–Protein interactions for RNA: ENST00000398587.6

PCDHGA11-201, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA11, Length 4,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-201ENST00000398587 ONECUT1Q9UBC0 465 aa12.34□□□□□ -0.43
PCDHGA11-201ENST00000398587 THSD7BQ9C0I4 1608 aa12.34□□□□□ -0.43
PCDHGA11-201ENST00000398587 A0A1B0GU03 582 aa12.34□□□□□ -0.43
PCDHGA11-201ENST00000398587 ADAM10O14672 748 aa12.34□□□□□ -0.43
PCDHGA11-201ENST00000398587 F2RP25116 425 aa12.34□□□□□ -0.43
PCDHGA11-201ENST00000398587 HSD17B10Q99714 261 aaKnown RBP12.34□□□□□ -0.43
PCDHGA11-201ENST00000398587 HES7Q9BYE0 225 aa12.34□□□□□ -0.43
PCDHGA11-201ENST00000398587 Q9N2K0 584 aa12.34□□□□□ -0.43
PCDHGA11-201ENST00000398587 PRSS50Q9UI38 385 aa12.34□□□□□ -0.43
PCDHGA11-201ENST00000398587 A0A1W2PPQ1 181 aa12.34□□□□□ -0.43
PCDHGA11-201ENST00000398587 MBPP02686 304 aaPredicted RBP12.34□□□□□ -0.43
PCDHGA11-201ENST00000398587 KRTCAP3Q53RY4 240 aa12.34□□□□□ -0.43
PCDHGA11-201ENST00000398587 BTNL3Q6UXE8 466 aa12.34□□□□□ -0.43
PCDHGA11-201ENST00000398587 TIPARPQ7Z3E1 657 aaKnown RBP12.34□□□□□ -0.43
PCDHGA11-201ENST00000398587 WNT2BQ93097 391 aa12.34□□□□□ -0.43
PCDHGA11-201ENST00000398587 BSCL2Q96G97 398 aaPredicted RBP12.34□□□□□ -0.43
PCDHGA11-201ENST00000398587 PRDM14Q9GZV8 571 aa12.34□□□□□ -0.43
PCDHGA11-201ENST00000398587 GPR179Q6PRD1 2367 aa12.34□□□□□ -0.43
PCDHGA11-201ENST00000398587 LINC00862A6NCI5 91 aa12.34□□□□□ -0.43
PCDHGA11-201ENST00000398587 ADAM11O75078 769 aa12.34□□□□□ -0.43
PCDHGA11-201ENST00000398587 SNAI3Q3KNW1 292 aa12.34□□□□□ -0.43
PCDHGA11-201ENST00000398587 C1orf185Q5T7R7 199 aa12.34□□□□□ -0.43
PCDHGA11-201ENST00000398587 MRPL14Q6P1L8 145 aaKnown RBP12.34□□□□□ -0.43
PCDHGA11-201ENST00000398587 MRGPRFQ96AM1 343 aa12.34□□□□□ -0.43
PCDHGA11-201ENST00000398587 ATP5SQ99766 215 aa12.34□□□□□ -0.43
PCDHGA11-201ENST00000398587 NUDT16L1Q9BRJ7 211 aaKnown RBP12.34□□□□□ -0.43
PCDHGA11-201ENST00000398587 CHRDL1Q9BU40 450 aa12.34□□□□□ -0.43
PCDHGA11-201ENST00000398587 HSF4Q9ULV5 492 aa12.34□□□□□ -0.43
PCDHGA11-201ENST00000398587 CLN5O75503 358 aa12.33□□□□□ -0.44
PCDHGA11-201ENST00000398587 UCNP55089 124 aa12.33□□□□□ -0.44
PCDHGA11-201ENST00000398587 RPL11P62913 178 aaKnown RBP12.33□□□□□ -0.44
PCDHGA11-201ENST00000398587 ARTNQ5T4W7 220 aa12.33□□□□□ -0.44
PCDHGA11-201ENST00000398587 LRRC75AQ8NAA5 344 aa12.33□□□□□ -0.44
PCDHGA11-201ENST00000398587 LPAR3Q9UBY5 353 aa12.33□□□□□ -0.44
PCDHGA11-201ENST00000398587 ACACAQ13085 2346 aa12.33□□□□□ -0.44
PCDHGA11-201ENST00000398587 CNN1P51911 297 aaKnown RBP12.33□□□□□ -0.44
PCDHGA11-201ENST00000398587 ETFRF1Q6IPR1 90 aa12.33□□□□□ -0.44
PCDHGA11-201ENST00000398587 NFAM1Q8NET5 270 aaPredicted RBP12.33□□□□□ -0.44
PCDHGA11-201ENST00000398587 IMMP1LQ96LU5 166 aa12.33□□□□□ -0.44
PCDHGA11-201ENST00000398587 OR5H1A6NKK0 313 aa12.33□□□□□ -0.44
PCDHGA11-201ENST00000398587 CLEC3BP05452 202 aa12.33□□□□□ -0.44
PCDHGA11-201ENST00000398587 FBP1P09467 338 aa12.33□□□□□ -0.44
PCDHGA11-201ENST00000398587 HOXA6P31267 233 aa12.33□□□□□ -0.44
PCDHGA11-201ENST00000398587 CDC34P49427 236 aaPredicted RBP12.33□□□□□ -0.44
PCDHGA11-201ENST00000398587 BATFQ16520 125 aa12.33□□□□□ -0.44
PCDHGA11-201ENST00000398587 DCAF12L2Q5VW00 463 aa12.33□□□□□ -0.44
PCDHGA11-201ENST00000398587 BVESQ8NE79 360 aa12.33□□□□□ -0.44
PCDHGA11-201ENST00000398587 OR1K1Q8NGR3 316 aa12.33□□□□□ -0.44
PCDHGA11-201ENST00000398587 OR5B3Q8NH48 314 aa12.33□□□□□ -0.44
PCDHGA11-201ENST00000398587 DTD1Q8TEA8 209 aa12.33□□□□□ -0.44
PCDHGA11-201ENST00000398587 TMEM54Q969K7 222 aa12.33□□□□□ -0.44
PCDHGA11-201ENST00000398587 WNT5BQ9H1J7 359 aa12.33□□□□□ -0.44
PCDHGA11-201ENST00000398587 ELF5Q9UKW6 265 aaPredicted RBP12.33□□□□□ -0.44
PCDHGA11-201ENST00000398587 ZNF646O15015 1829 aaPredicted RBP12.33□□□□□ -0.44
PCDHGA11-201ENST00000398587 A0A1W2PN81 502 aa12.33□□□□□ -0.44
PCDHGA11-201ENST00000398587 TMEM14DPA8MWL7 114 aa12.33□□□□□ -0.44
PCDHGA11-201ENST00000398587 LEUTXA8MZ59 168 aa12.33□□□□□ -0.44
PCDHGA11-201ENST00000398587 CHRNA7P36544 502 aa12.33□□□□□ -0.44
PCDHGA11-201ENST00000398587 CEACAM3P40198 252 aa12.33□□□□□ -0.44
PCDHGA11-201ENST00000398587 OPRK1P41145 380 aa12.33□□□□□ -0.44
PCDHGA11-201ENST00000398587 SCGB2A2Q13296 93 aa12.33□□□□□ -0.44
PCDHGA11-201ENST00000398587 GINS3Q9BRX5 216 aa12.33□□□□□ -0.44
PCDHGA11-201ENST00000398587 SLC45A2Q9UMX9 530 aa12.33□□□□□ -0.44
PCDHGA11-201ENST00000398587 AMMECR1Q9Y4X0 333 aaPredicted RBP12.33□□□□□ -0.44
PCDHGA11-201ENST00000398587 LOC390937A0A1W2PQ73 354 aa12.32□□□□□ -0.44
PCDHGA11-201ENST00000398587 K7ESF4 209 aa12.32□□□□□ -0.44
PCDHGA11-201ENST00000398587 HNF1AP20823 631 aa12.32□□□□□ -0.44
PCDHGA11-201ENST00000398587 EWSR1Q01844 656 aaKnown RBP eCLIP12.32□□□□□ -0.44
PCDHGA11-201ENST00000398587 AESQ08117 197 aa12.32□□□□□ -0.44
PCDHGA11-201ENST00000398587 CLEC9AQ6UXN8 241 aa12.32□□□□□ -0.44
PCDHGA11-201ENST00000398587 STPG2Q8N412 459 aa12.32□□□□□ -0.44
PCDHGA11-201ENST00000398587 OR10G4Q8NGN3 311 aa12.32□□□□□ -0.44
PCDHGA11-201ENST00000398587 OR10G9Q8NGN4 311 aa12.32□□□□□ -0.44
PCDHGA11-201ENST00000398587 OR10G7Q8NGN6 311 aa12.32□□□□□ -0.44
PCDHGA11-201ENST00000398587 RNF24Q9Y225 148 aa12.32□□□□□ -0.44
PCDHGA11-201ENST00000398587 ZNF835Q9Y2P0 537 aa12.32□□□□□ -0.44
PCDHGA11-201ENST00000398587 RAMP1O60894 148 aa12.32□□□□□ -0.44
PCDHGA11-201ENST00000398587 RPS2P15880 293 aaKnown RBP12.32□□□□□ -0.44
PCDHGA11-201ENST00000398587 SULT1A1P50225 295 aa12.32□□□□□ -0.44
PCDHGA11-201ENST00000398587 RHOBP62745 196 aa12.32□□□□□ -0.44
PCDHGA11-201ENST00000398587 DEFA6Q01524 100 aa12.32□□□□□ -0.44
PCDHGA11-201ENST00000398587 ZNRF4Q8WWF5 429 aa12.32□□□□□ -0.44
PCDHGA11-201ENST00000398587 SDHCQ99643 169 aaPredicted RBP12.32□□□□□ -0.44
PCDHGA11-201ENST00000398587 MED19A0JLT2 244 aaPredicted RBP12.32□□□□□ -0.44
PCDHGA11-201ENST00000398587 TMEM218A2RU14 115 aa12.32□□□□□ -0.44
PCDHGA11-201ENST00000398587 NQO2P16083 231 aa12.32□□□□□ -0.44
PCDHGA11-201ENST00000398587 COX7A1P24310 79 aa12.32□□□□□ -0.44
PCDHGA11-201ENST00000398587 ARL16Q0P5N6 197 aa12.32□□□□□ -0.44
PCDHGA11-201ENST00000398587 UBE2V2Q15819 145 aa12.32□□□□□ -0.44
PCDHGA11-201ENST00000398587 SPINK9Q5DT21 86 aa12.32□□□□□ -0.44
PCDHGA11-201ENST00000398587 FAM219AQ8IW50 185 aa12.32□□□□□ -0.44
PCDHGA11-201ENST00000398587 PKIBQ9C010 78 aa12.32□□□□□ -0.44
PCDHGA11-201ENST00000398587 NARFLQ9H6Q4 476 aa12.32□□□□□ -0.44
PCDHGA11-201ENST00000398587 FOXJ2Q9P0K8 574 aa12.32□□□□□ -0.44
PCDHGA11-201ENST00000398587 V9GYS6 101 aa12.32□□□□□ -0.44
PCDHGA11-201ENST00000398587 LOC101059948A0A1B0GTJ6 334 aa12.31□□□□□ -0.44
PCDHGA11-201ENST00000398587 HLA-GP17693 338 aa12.31□□□□□ -0.44
PCDHGA11-201ENST00000398587 TLE1Q04724 770 aa12.31□□□□□ -0.44
PCDHGA11-201ENST00000398587 SIGIRRQ6IA17 410 aa12.31□□□□□ -0.44
PCDHGA11-201ENST00000398587 RGP1Q92546 391 aaPredicted RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms