RNA–Protein interactions for RNA: ENST00000398137.5

U2AF1-203, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-203ENST00000398137 NCOR1P1Q9H4R4 102 aa20.79■□□□□ 0.92
U2AF1-203ENST00000398137 METTL8Q9H825 291 aaKnown RBP20.79■□□□□ 0.92
U2AF1-203ENST00000398137 HSF4Q9ULV5 492 aa20.79■□□□□ 0.92
U2AF1-203ENST00000398137 A0A075B6Q4 140 aa20.78■□□□□ 0.92
U2AF1-203ENST00000398137 MT-ND4P03905 459 aa20.78■□□□□ 0.92
U2AF1-203ENST00000398137 KLRD1Q13241 179 aa20.78■□□□□ 0.92
U2AF1-203ENST00000398137 OLFML2AQ68BL7 652 aa20.78■□□□□ 0.92
U2AF1-203ENST00000398137 ZNF782Q6ZMW2 699 aaPredicted RBP20.78■□□□□ 0.92
U2AF1-203ENST00000398137 C1orf122Q6ZSJ8 110 aa20.78■□□□□ 0.92
U2AF1-203ENST00000398137 C11orf42Q8N5U0 333 aa20.78■□□□□ 0.92
U2AF1-203ENST00000398137 SAMD12Q8N8I0 201 aa20.78■□□□□ 0.92
U2AF1-203ENST00000398137 OR4K15Q8NH41 348 aa20.78■□□□□ 0.92
U2AF1-203ENST00000398137 GCDHQ92947 438 aaPredicted RBP20.78■□□□□ 0.92
U2AF1-203ENST00000398137 LHX4Q969G2 390 aa20.78■□□□□ 0.92
U2AF1-203ENST00000398137 DUX5Q96PT3 197 aa20.78■□□□□ 0.92
U2AF1-203ENST00000398137 GAL3ST2Q9H3Q3 398 aa20.78■□□□□ 0.92
U2AF1-203ENST00000398137 RSL24D1Q9UHA3 163 aaKnown RBP20.78■□□□□ 0.92
U2AF1-203ENST00000398137 AK3Q9UIJ7 227 aa20.78■□□□□ 0.92
U2AF1-203ENST00000398137 C17orf98A8MV24 154 aa20.77■□□□□ 0.92
U2AF1-203ENST00000398137 CA11O75493 328 aa20.77■□□□□ 0.92
U2AF1-203ENST00000398137 CLPXO76031 633 aa20.77■□□□□ 0.92
U2AF1-203ENST00000398137 HIST1H1DP16402 221 aaKnown RBP20.77■□□□□ 0.92
U2AF1-203ENST00000398137 ZNF182P17025 639 aaPredicted RBP20.77■□□□□ 0.92
U2AF1-203ENST00000398137 PRAMEF5Q5TYX0 476 aa20.77■□□□□ 0.92
U2AF1-203ENST00000398137 PDZD9Q8IXQ8 264 aa20.77■□□□□ 0.92
U2AF1-203ENST00000398137 MRPL30Q8TCC3 161 aaKnown RBP20.77■□□□□ 0.92
U2AF1-203ENST00000398137 DYNC2LI1Q8TCX1 351 aa20.77■□□□□ 0.92
U2AF1-203ENST00000398137 TAS2R3Q9NYW6 316 aa20.77■□□□□ 0.92
U2AF1-203ENST00000398137 COMMD3Q9UBI1 195 aa20.77■□□□□ 0.92
U2AF1-203ENST00000398137 TRAPPC2LQ9UL33 140 aa20.77■□□□□ 0.92
U2AF1-203ENST00000398137 NBEAL1Q6ZS30 2694 aa20.76■□□□□ 0.91
U2AF1-203ENST00000398137 hCG_1809904A0A1W2PP81 198 aa20.76■□□□□ 0.91
U2AF1-203ENST00000398137 A0A1W2PPE2 198 aa20.76■□□□□ 0.91
U2AF1-203ENST00000398137 A0A1W2PR64 198 aa20.76■□□□□ 0.91
U2AF1-203ENST00000398137 A0A1W2PRV1 198 aa20.76■□□□□ 0.91
U2AF1-203ENST00000398137 DNAJC9-AS1A6NH13 148 aa20.76■□□□□ 0.91
U2AF1-203ENST00000398137 GNB3P16520 340 aa20.76■□□□□ 0.91
U2AF1-203ENST00000398137 PRTN3P24158 256 aa20.76■□□□□ 0.91
U2AF1-203ENST00000398137 SOX6P35712 828 aa20.76■□□□□ 0.91
U2AF1-203ENST00000398137 UBE2NLQ5JXB2 153 aa20.76■□□□□ 0.91
U2AF1-203ENST00000398137 C9orf139Q6ZV77 190 aa20.76■□□□□ 0.91
U2AF1-203ENST00000398137 GAPTQ8N292 157 aa20.76■□□□□ 0.91
U2AF1-203ENST00000398137 AP3S1Q92572 193 aa20.76■□□□□ 0.91
U2AF1-203ENST00000398137 HDHD3Q9BSH5 251 aaPredicted RBP20.76■□□□□ 0.91
U2AF1-203ENST00000398137 ZMAT3Q9HA38 289 aaKnown RBP20.76■□□□□ 0.91
U2AF1-203ENST00000398137 CHMP1AQ9HD42 196 aaPredicted RBP20.76■□□□□ 0.91
U2AF1-203ENST00000398137 CALYQ9NYX4 217 aa20.76■□□□□ 0.91
U2AF1-203ENST00000398137 KCNK7Q9Y2U2 307 aa20.76■□□□□ 0.91
U2AF1-203ENST00000398137 KIAA2026Q5HYC2 2103 aa20.75■□□□□ 0.91
U2AF1-203ENST00000398137 ZNF729A6NN14 1252 aaPredicted RBP20.75■□□□□ 0.91
U2AF1-203ENST00000398137 MFNGO00587 321 aa20.75■□□□□ 0.91
U2AF1-203ENST00000398137 SCGNO76038 276 aa20.75■□□□□ 0.91
U2AF1-203ENST00000398137 RBP4P02753 201 aa20.75■□□□□ 0.91
U2AF1-203ENST00000398137 IGHV1-8P0DP01 117 aa20.75■□□□□ 0.91
U2AF1-203ENST00000398137 SSTR5P35346 364 aa20.75■□□□□ 0.91
U2AF1-203ENST00000398137 C17orf58Q2M2W7 97 aa20.75■□□□□ 0.91
U2AF1-203ENST00000398137 ZNF565Q8N9K5 539 aa20.75■□□□□ 0.91
U2AF1-203ENST00000398137 ACOT12Q8WYK0 555 aa20.75■□□□□ 0.91
U2AF1-203ENST00000398137 TNFRSF14Q92956 283 aa20.75■□□□□ 0.91
U2AF1-203ENST00000398137 UNKLQ9H9P5 680 aaKnown RBP20.75■□□□□ 0.91
U2AF1-203ENST00000398137 CCDC59Q9P031 241 aaKnown RBP20.75■□□□□ 0.91
U2AF1-203ENST00000398137 KBTBD11-OT1A0A1B0GTJ5 212 aa20.74■□□□□ 0.91
U2AF1-203ENST00000398137 RNASEK-C17orf49H0YIS7 233 aa20.74■□□□□ 0.91
U2AF1-203ENST00000398137 MMP23AO75900 390 aa20.74■□□□□ 0.91
U2AF1-203ENST00000398137 OMGP23515 440 aa20.74■□□□□ 0.91
U2AF1-203ENST00000398137 CDK2P24941 298 aa20.74■□□□□ 0.91
U2AF1-203ENST00000398137 GDNFP39905 211 aa20.74■□□□□ 0.91
U2AF1-203ENST00000398137 DYNC1I2Q13409 638 aaKnown RBP20.74■□□□□ 0.91
U2AF1-203ENST00000398137 AWAT1Q58HT5 328 aa20.74■□□□□ 0.91
U2AF1-203ENST00000398137 GPR157Q5UAW9 335 aa20.74■□□□□ 0.91
U2AF1-203ENST00000398137 NCR3LG1Q68D85 454 aa20.74■□□□□ 0.91
U2AF1-203ENST00000398137 UBALD1Q8TB05 177 aa20.74■□□□□ 0.91
U2AF1-203ENST00000398137 PHF21AQ96BD5 680 aa20.74■□□□□ 0.91
U2AF1-203ENST00000398137 CENPVL3A0A0U1RRI6 287 aa20.73■□□□□ 0.91
U2AF1-203ENST00000398137 MDFIC2A0A1B0GVS7 189 aa20.73■□□□□ 0.91
U2AF1-203ENST00000398137 SMIM31A0A1B0GVY4 71 aa20.73■□□□□ 0.91
U2AF1-203ENST00000398137 DPPA5A6NC42 116 aa20.73■□□□□ 0.91
U2AF1-203ENST00000398137 CGB3P0DN86 165 aa20.73■□□□□ 0.91
U2AF1-203ENST00000398137 CGB7P0DN87 165 aa20.73■□□□□ 0.91
U2AF1-203ENST00000398137 RCC1P18754 421 aaPredicted RBP20.73■□□□□ 0.91
U2AF1-203ENST00000398137 COX7A1P24310 79 aa20.73■□□□□ 0.91
U2AF1-203ENST00000398137 RUSC1-AS1Q66K80 236 aa20.73■□□□□ 0.91
U2AF1-203ENST00000398137 CMSS1Q9BQ75 279 aaKnown RBP20.73■□□□□ 0.91
U2AF1-203ENST00000398137 ABCG5Q9H222 651 aa20.73■□□□□ 0.91
U2AF1-203ENST00000398137 C12orf4Q9NQ89 552 aa20.73■□□□□ 0.91
U2AF1-203ENST00000398137 SESN1Q9Y6P5 492 aa20.73■□□□□ 0.91
U2AF1-203ENST00000398137 A0A1W2PRD5 423 aa20.72■□□□□ 0.91
U2AF1-203ENST00000398137 A0A1W2PRF3 423 aa20.72■□□□□ 0.91
U2AF1-203ENST00000398137 A0A1W2PRM7 423 aa20.72■□□□□ 0.91
U2AF1-203ENST00000398137 ZNF701M0R085 212 aaPredicted RBP20.72■□□□□ 0.91
U2AF1-203ENST00000398137 NAPSAO96009 420 aa20.72■□□□□ 0.91
U2AF1-203ENST00000398137 EIF4EP06730 217 aaKnown RBP20.72■□□□□ 0.91
U2AF1-203ENST00000398137 C6orf183Q5T699 404 aa20.72■□□□□ 0.91
U2AF1-203ENST00000398137 HCP5Q6MZN7 132 aa20.72■□□□□ 0.91
U2AF1-203ENST00000398137 MZT2AQ6P582 158 aa20.72■□□□□ 0.91
U2AF1-203ENST00000398137 BAIAP2L2Q6UXY1 529 aa20.72■□□□□ 0.91
U2AF1-203ENST00000398137 HEPN1Q6WQI6 88 aa20.72■□□□□ 0.91
U2AF1-203ENST00000398137 BRD3OSQ6XYD6 125 aa20.72■□□□□ 0.91
U2AF1-203ENST00000398137 Q6ZPA2 131 aa20.72■□□□□ 0.91
U2AF1-203ENST00000398137 IZUMO1Q8IYV9 350 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms