RNA–Protein interactions for RNA: ENST00000397545.8

CCDC40-204, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS P3 TSL 5 BASIC

Gene CCDC40, Length 4,294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-204ENST00000397545 A0A0G2JK05 382 aa9.39□□□□□ -0.91
CCDC40-204ENST00000397545 MFNGO00587 321 aa9.39□□□□□ -0.91
CCDC40-204ENST00000397545 BCL3P20749 454 aa9.39□□□□□ -0.91
CCDC40-204ENST00000397545 P2RY1P47900 373 aa9.39□□□□□ -0.91
CCDC40-204ENST00000397545 SUMO1P63165 101 aaKnown RBP9.39□□□□□ -0.91
CCDC40-204ENST00000397545 FAM3AP98173 230 aa9.39□□□□□ -0.91
CCDC40-204ENST00000397545 IL24Q13007 206 aa9.39□□□□□ -0.91
CCDC40-204ENST00000397545 VAMP3Q15836 100 aa9.39□□□□□ -0.91
CCDC40-204ENST00000397545 LDLRAD3Q86YD5 345 aa9.39□□□□□ -0.91
CCDC40-204ENST00000397545 ZADH2Q8N4Q0 377 aa9.39□□□□□ -0.91
CCDC40-204ENST00000397545 CHST5Q9GZS9 411 aa9.39□□□□□ -0.91
CCDC40-204ENST00000397545 PARD6AQ9NPB6 346 aa9.39□□□□□ -0.91
CCDC40-204ENST00000397545 GPR132Q9UNW8 380 aa9.39□□□□□ -0.91
CCDC40-204ENST00000397545 ATP23Q9Y6H3 246 aa9.39□□□□□ -0.91
CCDC40-204ENST00000397545 M0R296 226 aa9.39□□□□□ -0.91
CCDC40-204ENST00000397545 P2RY4P51582 365 aa9.39□□□□□ -0.91
CCDC40-204ENST00000397545 SUB1P53999 127 aaKnown RBP eCLIP9.39□□□□□ -0.91
CCDC40-204ENST00000397545 TCL1AP56279 114 aa9.39□□□□□ -0.91
CCDC40-204ENST00000397545 DEFB109BQ30KR1 87 aa9.39□□□□□ -0.91
CCDC40-204ENST00000397545 TECTBQ96PL2 329 aa9.39□□□□□ -0.91
CCDC40-204ENST00000397545 TAAR6Q96RI8 345 aa9.39□□□□□ -0.91
CCDC40-204ENST00000397545 SLC26A1Q9H2B4 701 aa9.39□□□□□ -0.91
CCDC40-204ENST00000397545 NGBQ9NPG2 151 aa9.39□□□□□ -0.91
CCDC40-204ENST00000397545 NPDC1Q9NQX5 325 aaPredicted RBP9.39□□□□□ -0.91
CCDC40-204ENST00000397545 A0A087X0M5 115 aa9.39□□□□□ -0.91
CCDC40-204ENST00000397545 A0A1B0GX30 115 aa9.39□□□□□ -0.91
CCDC40-204ENST00000397545 SEC14L6B5MCN3 397 aa9.39□□□□□ -0.91
CCDC40-204ENST00000397545 CDC34P49427 236 aaPredicted RBP9.39□□□□□ -0.91
CCDC40-204ENST00000397545 FHITP49789 147 aa9.39□□□□□ -0.91
CCDC40-204ENST00000397545 ZNF83P51522 516 aa9.39□□□□□ -0.91
CCDC40-204ENST00000397545 IL11RAQ14626 422 aa9.39□□□□□ -0.91
CCDC40-204ENST00000397545 RTL8BQ17RB0 113 aa9.39□□□□□ -0.91
CCDC40-204ENST00000397545 ANKRD55Q3KP44 614 aa9.39□□□□□ -0.91
CCDC40-204ENST00000397545 KDF1Q8NAX2 398 aaPredicted RBP9.39□□□□□ -0.91
CCDC40-204ENST00000397545 OR2M3Q8NG83 312 aa9.39□□□□□ -0.91
CCDC40-204ENST00000397545 ZNF107Q9UII5 783 aaPredicted RBP9.39□□□□□ -0.91
CCDC40-204ENST00000397545 TINAGQ9UJW2 476 aa9.39□□□□□ -0.91
CCDC40-204ENST00000397545 NUP210Q8TEM1 1887 aaPredicted RBP9.39□□□□□ -0.91
CCDC40-204ENST00000397545 A0A0J9YW62 118 aa9.39□□□□□ -0.91
CCDC40-204ENST00000397545 STUMQ69YW2 141 aa9.39□□□□□ -0.91
CCDC40-204ENST00000397545 ATRAIDQ6UW56 229 aa9.39□□□□□ -0.91
CCDC40-204ENST00000397545 NUFIP2Q7Z417 695 aaKnown RBP9.39□□□□□ -0.91
CCDC40-204ENST00000397545 CYB561D1Q8N8Q1 229 aa9.39□□□□□ -0.91
CCDC40-204ENST00000397545 SSMEM1Q8WWF3 244 aa9.39□□□□□ -0.91
CCDC40-204ENST00000397545 CORO2AQ92828 525 aa9.39□□□□□ -0.91
CCDC40-204ENST00000397545 DOK5Q9P104 306 aa9.39□□□□□ -0.91
CCDC40-204ENST00000397545 SPTBN5Q9NRC6 3674 aaKnown RBP9.38□□□□□ -0.91
CCDC40-204ENST00000397545 TRBV5-7A0A0A0MS05 114 aa9.38□□□□□ -0.91
CCDC40-204ENST00000397545 SERTM2A0A1B0GWG4 89 aa9.38□□□□□ -0.91
CCDC40-204ENST00000397545 FCN1O00602 326 aa9.38□□□□□ -0.91
CCDC40-204ENST00000397545 SLC31A2O15432 143 aa9.38□□□□□ -0.91
CCDC40-204ENST00000397545 KLF4O43474 513 aa9.38□□□□□ -0.91
CCDC40-204ENST00000397545 ADAM11O75078 769 aa9.38□□□□□ -0.91
CCDC40-204ENST00000397545 HPP00738 406 aa9.38□□□□□ -0.91
CCDC40-204ENST00000397545 GYPAP02724 150 aa9.38□□□□□ -0.91
CCDC40-204ENST00000397545 FCER1GP30273 86 aa9.38□□□□□ -0.91
CCDC40-204ENST00000397545 LGALS4P56470 323 aa9.38□□□□□ -0.91
CCDC40-204ENST00000397545 ROM1Q03395 351 aa9.38□□□□□ -0.91
CCDC40-204ENST00000397545 TGIF1Q15583 401 aa9.38□□□□□ -0.91
CCDC40-204ENST00000397545 CTHRC1Q96CG8 243 aa9.38□□□□□ -0.91
CCDC40-204ENST00000397545 EGLN1Q9GZT9 426 aa9.38□□□□□ -0.91
CCDC40-204ENST00000397545 PPP1R14DQ9NXH3 145 aa9.38□□□□□ -0.91
CCDC40-204ENST00000397545 PRSS50Q9UI38 385 aa9.38□□□□□ -0.91
CCDC40-204ENST00000397545 KLK2P20151 261 aa9.38□□□□□ -0.91
CCDC40-204ENST00000397545 EGR4Q05215 589 aa9.38□□□□□ -0.91
CCDC40-204ENST00000397545 DMWDQ09019 674 aa9.38□□□□□ -0.91
CCDC40-204ENST00000397545 FHL5Q5TD97 284 aa9.38□□□□□ -0.91
CCDC40-204ENST00000397545 OR2T10Q8NGZ9 312 aa9.38□□□□□ -0.91
CCDC40-204ENST00000397545 GPX7Q96SL4 187 aaPredicted RBP9.38□□□□□ -0.91
CCDC40-204ENST00000397545 GINS3Q9BRX5 216 aa9.38□□□□□ -0.91
CCDC40-204ENST00000397545 PARP11Q9NR21 331 aa9.38□□□□□ -0.91
CCDC40-204ENST00000397545 MPDZO75970 2070 aa9.38□□□□□ -0.91
CCDC40-204ENST00000397545 CD1AP06126 327 aa9.38□□□□□ -0.91
CCDC40-204ENST00000397545 SNRPCP09234 159 aaKnown RBP9.38□□□□□ -0.91
CCDC40-204ENST00000397545 SMIM10L1P0DMW3 83 aa9.38□□□□□ -0.91
CCDC40-204ENST00000397545 CXorf66Q5JRM2 361 aaPredicted RBP9.38□□□□□ -0.91
CCDC40-204ENST00000397545 HES3Q5TGS1 186 aa9.38□□□□□ -0.91
CCDC40-204ENST00000397545 ZNF383Q8NA42 475 aa9.38□□□□□ -0.91
CCDC40-204ENST00000397545 NEIL1Q96FI4 390 aaPredicted RBP9.38□□□□□ -0.91
CCDC40-204ENST00000397545 SMIM10Q96HG1 83 aa9.38□□□□□ -0.91
CCDC40-204ENST00000397545 VAMP8Q9BV40 100 aa9.38□□□□□ -0.91
CCDC40-204ENST00000397545 TREM2Q9NZC2 230 aa9.38□□□□□ -0.91
CCDC40-204ENST00000397545 TRDCB7Z8K6 153 aa9.37□□□□□ -0.91
CCDC40-204ENST00000397545 COX7A2P2O60397 106 aa9.37□□□□□ -0.91
CCDC40-204ENST00000397545 OR2A4O95047 310 aa9.37□□□□□ -0.91
CCDC40-204ENST00000397545 SEC11BP0C7V7 166 aa9.37□□□□□ -0.91
CCDC40-204ENST00000397545 MPLP40238 635 aa9.37□□□□□ -0.91
CCDC40-204ENST00000397545 CAMPP49913 170 aa9.37□□□□□ -0.91
CCDC40-204ENST00000397545 IQCJQ1A5X6 159 aa9.37□□□□□ -0.91
CCDC40-204ENST00000397545 OR2Y1Q8NGV0 311 aa9.37□□□□□ -0.91
CCDC40-204ENST00000397545 CA5BP1Q8WTZ4 195 aa9.37□□□□□ -0.91
CCDC40-204ENST00000397545 OR2A7Q96R45 310 aa9.37□□□□□ -0.91
CCDC40-204ENST00000397545 RSG1Q9BU20 258 aa9.37□□□□□ -0.91
CCDC40-204ENST00000397545 OR1A1Q9P1Q5 309 aa9.37□□□□□ -0.91
CCDC40-204ENST00000397545 FUT9Q9Y231 359 aa9.37□□□□□ -0.91
CCDC40-204ENST00000397545 COL4A3Q01955 1670 aa9.37□□□□□ -0.91
CCDC40-204ENST00000397545 CACNA1AO00555 2505 aa9.37□□□□□ -0.91
CCDC40-204ENST00000397545 PMS2P1A4D2B8 440 aa9.37□□□□□ -0.91
CCDC40-204ENST00000397545 TSPAN2O60636 221 aa9.37□□□□□ -0.91
CCDC40-204ENST00000397545 CT45A10P0DMU9 189 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms