RNA–Protein interactions for RNA: ENST00000397053.6

UPF2-203, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UPF2, Length 5,369 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-203ENST00000397053 OR8B12Q8NGG6 310 aa6.31□□□□□ -1.4
UPF2-203ENST00000397053 RTN4RQ9BZR6 473 aa6.31□□□□□ -1.4
UPF2-203ENST00000397053 OR2H1Q9GZK4 316 aa6.31□□□□□ -1.4
UPF2-203ENST00000397053 WIPI2Q9Y4P8 454 aa6.31□□□□□ -1.4
UPF2-203ENST00000397053 CCL27Q9Y4X3 112 aa6.31□□□□□ -1.4
UPF2-203ENST00000397053 A0A1B0GU03 582 aa6.31□□□□□ -1.4
UPF2-203ENST00000397053 PRDX2P32119 198 aa6.31□□□□□ -1.4
UPF2-203ENST00000397053 WNT3P56703 355 aa6.31□□□□□ -1.4
UPF2-203ENST00000397053 RAB32Q13637 225 aa6.31□□□□□ -1.4
UPF2-203ENST00000397053 MPV17LQ2QL34 196 aa6.31□□□□□ -1.4
UPF2-203ENST00000397053 COX19Q49B96 90 aa6.31□□□□□ -1.4
UPF2-203ENST00000397053 LINC00299Q6ZSB3 139 aa6.31□□□□□ -1.4
UPF2-203ENST00000397053 C16orf82Q7Z2V1 217 aa6.31□□□□□ -1.4
UPF2-203ENST00000397053 OR10G8Q8NGN5 311 aa6.31□□□□□ -1.4
UPF2-203ENST00000397053 MARS2Q96GW9 593 aaKnown RBP6.31□□□□□ -1.4
UPF2-203ENST00000397053 SCNM1Q9BWG6 230 aa6.31□□□□□ -1.4
UPF2-203ENST00000397053 YAE1D1Q9NRH1 226 aa6.31□□□□□ -1.4
UPF2-203ENST00000397053 HIGD1AQ9Y241 93 aa6.31□□□□□ -1.4
UPF2-203ENST00000397053 MYH7P12883 1935 aa6.31□□□□□ -1.4
UPF2-203ENST00000397053 M0R2Z0 102 aa6.31□□□□□ -1.4
UPF2-203ENST00000397053 NDUFA2O43678 99 aa6.31□□□□□ -1.4
UPF2-203ENST00000397053 PRSS2P07478 247 aa6.31□□□□□ -1.4
UPF2-203ENST00000397053 RD3LP0DJH9 198 aa6.31□□□□□ -1.4
UPF2-203ENST00000397053 PNLIPP16233 465 aa6.31□□□□□ -1.4
UPF2-203ENST00000397053 FGF8P55075 233 aaPredicted RBP6.31□□□□□ -1.4
UPF2-203ENST00000397053 ARF6P62330 175 aa6.31□□□□□ -1.4
UPF2-203ENST00000397053 AESQ08117 197 aa6.31□□□□□ -1.4
UPF2-203ENST00000397053 PRSS54Q6PEW0 395 aa6.31□□□□□ -1.4
UPF2-203ENST00000397053 CCL19Q99731 98 aa6.31□□□□□ -1.4
UPF2-203ENST00000397053 OPN3Q9H1Y3 402 aaPredicted RBP6.31□□□□□ -1.4
UPF2-203ENST00000397053 Q9N2K0 584 aa6.31□□□□□ -1.4
UPF2-203ENST00000397053 PRR33A8MZF0 331 aa6.31□□□□□ -1.4
UPF2-203ENST00000397053 M0R143 59 aa6.31□□□□□ -1.4
UPF2-203ENST00000397053 MGST3O14880 152 aa6.31□□□□□ -1.4
UPF2-203ENST00000397053 RAB29O14966 203 aa6.31□□□□□ -1.4
UPF2-203ENST00000397053 FOXH1O75593 365 aa6.31□□□□□ -1.4
UPF2-203ENST00000397053 PTHLHP12272 177 aa6.31□□□□□ -1.4
UPF2-203ENST00000397053 FCARP24071 287 aa6.31□□□□□ -1.4
UPF2-203ENST00000397053 CTSSP25774 331 aa6.31□□□□□ -1.4
UPF2-203ENST00000397053 TSPOP30536 169 aa6.31□□□□□ -1.4
UPF2-203ENST00000397053 SLC25A53Q5H9E4 307 aa6.31□□□□□ -1.4
UPF2-203ENST00000397053 AMER3Q8N944 861 aa6.31□□□□□ -1.4
UPF2-203ENST00000397053 H3BVH4 76 aa6.3□□□□□ -1.4
UPF2-203ENST00000397053 CEBPEQ15744 281 aa6.3□□□□□ -1.4
UPF2-203ENST00000397053 NFAM1Q8NET5 270 aaPredicted RBP6.3□□□□□ -1.4
UPF2-203ENST00000397053 OIT3Q8WWZ8 545 aa6.3□□□□□ -1.4
UPF2-203ENST00000397053 ELOVL1Q9BW60 279 aa6.3□□□□□ -1.4
UPF2-203ENST00000397053 CNTD2Q9H8S5 307 aa6.3□□□□□ -1.4
UPF2-203ENST00000397053 DEDDO75618 318 aa6.3□□□□□ -1.4
UPF2-203ENST00000397053 CT62P0C5K7 136 aa6.3□□□□□ -1.4
UPF2-203ENST00000397053 LIFP15018 202 aa6.3□□□□□ -1.4
UPF2-203ENST00000397053 MMP15P51511 669 aa6.3□□□□□ -1.4
UPF2-203ENST00000397053 PPP1R1AQ13522 171 aa6.3□□□□□ -1.4
UPF2-203ENST00000397053 ELOBQ15370 118 aa6.3□□□□□ -1.4
UPF2-203ENST00000397053 MOGAT2Q3SYC2 334 aa6.3□□□□□ -1.4
UPF2-203ENST00000397053 C1QL3Q5VWW1 255 aa6.3□□□□□ -1.4
UPF2-203ENST00000397053 TMEM251Q8N6I4 163 aa6.3□□□□□ -1.4
UPF2-203ENST00000397053 OR2D3Q8NGH3 330 aa6.3□□□□□ -1.4
UPF2-203ENST00000397053 MRPL30Q8TCC3 161 aaKnown RBP6.3□□□□□ -1.4
UPF2-203ENST00000397053 ZG16BQ96DA0 208 aa6.3□□□□□ -1.4
UPF2-203ENST00000397053 TMEM272A0A1B0GTI8 110 aa6.3□□□□□ -1.4
UPF2-203ENST00000397053 CGB1A6NKQ9 187 aa6.3□□□□□ -1.4
UPF2-203ENST00000397053 LEUTXA8MZ59 168 aa6.3□□□□□ -1.4
UPF2-203ENST00000397053 GEMIN2O14893 280 aaKnown RBP6.3□□□□□ -1.4
UPF2-203ENST00000397053 HPXP02790 462 aa6.3□□□□□ -1.4
UPF2-203ENST00000397053 ISG15P05161 165 aa6.3□□□□□ -1.4
UPF2-203ENST00000397053 HIST1H1BP16401 226 aaKnown RBP6.3□□□□□ -1.4
UPF2-203ENST00000397053 DHRS2Q13268 280 aa6.3□□□□□ -1.4
UPF2-203ENST00000397053 TSPO2Q5TGU0 170 aa6.3□□□□□ -1.4
UPF2-203ENST00000397053 FAM53AQ6NSI3 398 aaPredicted RBP6.3□□□□□ -1.4
UPF2-203ENST00000397053 MRPL54Q6P161 138 aaKnown RBP6.3□□□□□ -1.4
UPF2-203ENST00000397053 ZBTB44Q8NCP5 570 aa6.3□□□□□ -1.4
UPF2-203ENST00000397053 RNF122Q9H9V4 155 aa6.3□□□□□ -1.4
UPF2-203ENST00000397053 BET1LQ9NYM9 111 aa6.3□□□□□ -1.4
UPF2-203ENST00000397053 MED19A0JLT2 244 aaPredicted RBP6.3□□□□□ -1.4
UPF2-203ENST00000397053 C11orf94C9JXX5 98 aa6.3□□□□□ -1.4
UPF2-203ENST00000397053 IFNL4K9M1U5 179 aa6.3□□□□□ -1.4
UPF2-203ENST00000397053 DAOP14920 347 aa6.3□□□□□ -1.4
UPF2-203ENST00000397053 CACNG7P62955 275 aa6.3□□□□□ -1.4
UPF2-203ENST00000397053 HERPUD1Q15011 391 aa6.3□□□□□ -1.4
UPF2-203ENST00000397053 BSXQ3C1V8 233 aa6.3□□□□□ -1.4
UPF2-203ENST00000397053 TEPPQ6URK8 271 aa6.3□□□□□ -1.4
UPF2-203ENST00000397053 PCSK4Q6UW60 755 aa6.3□□□□□ -1.4
UPF2-203ENST00000397053 MMD2Q8IY49 270 aa6.3□□□□□ -1.4
UPF2-203ENST00000397053 ZBTB34Q8NCN2 500 aa6.3□□□□□ -1.4
UPF2-203ENST00000397053 OR2V2Q96R30 315 aa6.3□□□□□ -1.4
UPF2-203ENST00000397053 ZNF385DQ9H6B1 395 aa6.3□□□□□ -1.4
UPF2-203ENST00000397053 SIRT7Q9NRC8 400 aa6.3□□□□□ -1.4
UPF2-203ENST00000397053 CCL28Q9NRJ3 127 aa6.3□□□□□ -1.4
UPF2-203ENST00000397053 MTFP1Q9UDX5 166 aa6.3□□□□□ -1.4
UPF2-203ENST00000397053 IL19Q9UHD0 177 aa6.3□□□□□ -1.4
UPF2-203ENST00000397053 STARD10Q9Y365 291 aa6.3□□□□□ -1.4
UPF2-203ENST00000397053 PCNX1Q96RV3 2341 aa6.29□□□□□ -1.4
UPF2-203ENST00000397053 A0A1W2PQD3 144 aa6.29□□□□□ -1.4
UPF2-203ENST00000397053 EDIL3O43854 480 aa6.29□□□□□ -1.4
UPF2-203ENST00000397053 TBX19O60806 448 aa6.29□□□□□ -1.4
UPF2-203ENST00000397053 OR2A4O95047 310 aa6.29□□□□□ -1.4
UPF2-203ENST00000397053 C1orf53Q5VUE5 145 aa6.29□□□□□ -1.4
UPF2-203ENST00000397053 C1orf162Q8NEQ5 155 aaPredicted RBP6.29□□□□□ -1.4
UPF2-203ENST00000397053 OR8A1Q8NGG7 326 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms