RNA–Protein interactions for RNA: ENST00000397036.4

MCF2L-209, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-209ENST00000397036 GPR37O15354 613 aa11.31□□□□□ -0.6
MCF2L-209ENST00000397036 TMPRSS2O15393 492 aa11.31□□□□□ -0.6
MCF2L-209ENST00000397036 TUSC2O75896 110 aa11.31□□□□□ -0.6
MCF2L-209ENST00000397036 HEXAP06865 529 aa11.31□□□□□ -0.6
MCF2L-209ENST00000397036 CGB3P0DN86 165 aa11.31□□□□□ -0.6
MCF2L-209ENST00000397036 CGB7P0DN87 165 aa11.31□□□□□ -0.6
MCF2L-209ENST00000397036 PAX1P15863 534 aa11.31□□□□□ -0.6
MCF2L-209ENST00000397036 GLP1RP43220 463 aa11.31□□□□□ -0.6
MCF2L-209ENST00000397036 UCP3P55916 312 aa11.31□□□□□ -0.6
MCF2L-209ENST00000397036 SEC61A1P61619 476 aaKnown RBP11.31□□□□□ -0.6
MCF2L-209ENST00000397036 MEF2CQ06413 473 aaPredicted RBP11.31□□□□□ -0.6
MCF2L-209ENST00000397036 C11orf91Q3C1V1 193 aa11.31□□□□□ -0.6
MCF2L-209ENST00000397036 AADACL3Q5VUY0 350 aa11.31□□□□□ -0.6
MCF2L-209ENST00000397036 CHAC2Q8WUX2 184 aa11.31□□□□□ -0.6
MCF2L-209ENST00000397036 MRGPRFQ96AM1 343 aa11.31□□□□□ -0.6
MCF2L-209ENST00000397036 PSMG3-AS1Q96PY0 264 aa11.31□□□□□ -0.6
MCF2L-209ENST00000397036 LINC00574Q9H8X3 128 aa11.31□□□□□ -0.6
MCF2L-209ENST00000397036 TAF9BQ9HBM6 251 aa11.31□□□□□ -0.6
MCF2L-209ENST00000397036 LPAR3Q9UBY5 353 aa11.31□□□□□ -0.6
MCF2L-209ENST00000397036 C7orf66A4D0T2 115 aa11.3□□□□□ -0.6
MCF2L-209ENST00000397036 ADAM20O43506 726 aa11.3□□□□□ -0.6
MCF2L-209ENST00000397036 TFF1P04155 84 aa11.3□□□□□ -0.6
MCF2L-209ENST00000397036 HERPUD1Q15011 391 aa11.3□□□□□ -0.6
MCF2L-209ENST00000397036 SCGB2B2Q4G0G5 96 aa11.3□□□□□ -0.6
MCF2L-209ENST00000397036 LRRC10Q5BKY1 277 aa11.3□□□□□ -0.6
MCF2L-209ENST00000397036 FAHD2BQ6P2I3 314 aaPredicted RBP11.3□□□□□ -0.6
MCF2L-209ENST00000397036 FAM216AQ8WUB2 273 aa11.3□□□□□ -0.6
MCF2L-209ENST00000397036 CCDC107Q8WV48 283 aa11.3□□□□□ -0.6
MCF2L-209ENST00000397036 FAHD2AQ96GK7 314 aa11.3□□□□□ -0.6
MCF2L-209ENST00000397036 GPR132Q9UNW8 380 aa11.3□□□□□ -0.6
MCF2L-209ENST00000397036 TRAV6A0A075B6T7 132 aa11.3□□□□□ -0.6
MCF2L-209ENST00000397036 IGKV1-6A0A0C4DH72 117 aa11.3□□□□□ -0.6
MCF2L-209ENST00000397036 A1L4Q6 167 aa11.3□□□□□ -0.6
MCF2L-209ENST00000397036 LYNX1G3V0Z9 82 aa11.3□□□□□ -0.6
MCF2L-209ENST00000397036 NDUFB3O43676 98 aa11.3□□□□□ -0.6
MCF2L-209ENST00000397036 LYNX1P0DP58 116 aa11.3□□□□□ -0.6
MCF2L-209ENST00000397036 FPR2P25090 351 aa11.3□□□□□ -0.6
MCF2L-209ENST00000397036 SSTR2P30874 369 aa11.3□□□□□ -0.6
MCF2L-209ENST00000397036 FCGR2CP31995 323 aa11.3□□□□□ -0.6
MCF2L-209ENST00000397036 CDKN1AP38936 164 aa11.3□□□□□ -0.6
MCF2L-209ENST00000397036 BCAP31P51572 246 aa11.3□□□□□ -0.6
MCF2L-209ENST00000397036 UBE2MP61081 183 aaKnown RBP11.3□□□□□ -0.6
MCF2L-209ENST00000397036 HTD2P86397 168 aa11.3□□□□□ -0.6
MCF2L-209ENST00000397036 TATDN3Q17R31 274 aa11.3□□□□□ -0.6
MCF2L-209ENST00000397036 TMEM30BQ3MIR4 351 aa11.3□□□□□ -0.6
MCF2L-209ENST00000397036 IGSF11Q5DX21 431 aa11.3□□□□□ -0.6
MCF2L-209ENST00000397036 FAM216BQ8N7L0 139 aa11.3□□□□□ -0.6
MCF2L-209ENST00000397036 TMEM185AQ8NFB2 350 aa11.3□□□□□ -0.6
MCF2L-209ENST00000397036 MOB3AQ96BX8 217 aa11.3□□□□□ -0.6
MCF2L-209ENST00000397036 GALMQ96C23 342 aa11.3□□□□□ -0.6
MCF2L-209ENST00000397036 ZNF2Q9BSG1 426 aaPredicted RBP11.3□□□□□ -0.6
MCF2L-209ENST00000397036 SLC25A10Q9UBX3 287 aaPredicted RBP11.3□□□□□ -0.6
MCF2L-209ENST00000397036 MIOXQ9UGB7 285 aa11.3□□□□□ -0.6
MCF2L-209ENST00000397036 PTPN13Q12923 2485 aa11.29□□□□□ -0.6
MCF2L-209ENST00000397036 hADV38S2A0JD32 116 aa11.29□□□□□ -0.6
MCF2L-209ENST00000397036 OR5H14A6NHG9 310 aa11.29□□□□□ -0.6
MCF2L-209ENST00000397036 C12orf77C9JDV5 145 aa11.29□□□□□ -0.6
MCF2L-209ENST00000397036 C15orf65H3BRN8 121 aa11.29□□□□□ -0.6
MCF2L-209ENST00000397036 ARPC1BO15143 372 aaKnown RBP11.29□□□□□ -0.6
MCF2L-209ENST00000397036 SELLP14151 372 aa11.29□□□□□ -0.6
MCF2L-209ENST00000397036 LPCAT3Q6P1A2 487 aa11.29□□□□□ -0.6
MCF2L-209ENST00000397036 CADM3Q8N126 398 aa11.29□□□□□ -0.6
MCF2L-209ENST00000397036 SPICQ8N5J4 248 aa11.29□□□□□ -0.6
MCF2L-209ENST00000397036 OR13A1Q8NGR1 328 aa11.29□□□□□ -0.6
MCF2L-209ENST00000397036 OR10J5Q8NHC4 309 aa11.29□□□□□ -0.6
MCF2L-209ENST00000397036 CCL19Q99731 98 aa11.29□□□□□ -0.6
MCF2L-209ENST00000397036 GHITMQ9H3K2 345 aa11.29□□□□□ -0.6
MCF2L-209ENST00000397036 LIME1Q9H400 295 aa11.29□□□□□ -0.6
MCF2L-209ENST00000397036 BARX1Q9HBU1 254 aaPredicted RBP11.29□□□□□ -0.6
MCF2L-209ENST00000397036 TAS2R3Q9NYW6 316 aa11.29□□□□□ -0.6
MCF2L-209ENST00000397036 FLVCR2Q9UPI3 526 aa11.29□□□□□ -0.6
MCF2L-209ENST00000397036 UBE2J1Q9Y385 318 aaPredicted RBP11.29□□□□□ -0.6
MCF2L-209ENST00000397036 TRBV23-1A0A0A0MS06 115 aa11.28□□□□□ -0.6
MCF2L-209ENST00000397036 A0A0B4J293 547 aa11.28□□□□□ -0.6
MCF2L-209ENST00000397036 A0A1B0GW55 424 aa11.28□□□□□ -0.6
MCF2L-209ENST00000397036 SNRPGP15A8MWD9 76 aa11.28□□□□□ -0.6
MCF2L-209ENST00000397036 F2RL2O00254 374 aa11.28□□□□□ -0.6
MCF2L-209ENST00000397036 SPINT2O43291 252 aa11.28□□□□□ -0.6
MCF2L-209ENST00000397036 HBZP02008 142 aa11.28□□□□□ -0.6
MCF2L-209ENST00000397036 WNT2P09544 360 aa11.28□□□□□ -0.6
MCF2L-209ENST00000397036 DUX4L2P0CJ85 424 aa11.28□□□□□ -0.6
MCF2L-209ENST00000397036 DUX4L3P0CJ86 424 aa11.28□□□□□ -0.6
MCF2L-209ENST00000397036 DUX4L4P0CJ87 422 aa11.28□□□□□ -0.6
MCF2L-209ENST00000397036 DUX4L5P0CJ88 424 aa11.28□□□□□ -0.6
MCF2L-209ENST00000397036 DUX4L6P0CJ89 424 aa11.28□□□□□ -0.6
MCF2L-209ENST00000397036 DUX4L7P0CJ90 424 aa11.28□□□□□ -0.6
MCF2L-209ENST00000397036 TRAPPC2P0DI81 140 aa11.28□□□□□ -0.6
MCF2L-209ENST00000397036 TRAPPC2BP0DI82 140 aa11.28□□□□□ -0.6
MCF2L-209ENST00000397036 ZBTB25P24278 435 aa11.28□□□□□ -0.6
MCF2L-209ENST00000397036 EDDM3AQ14507 147 aa11.28□□□□□ -0.6
MCF2L-209ENST00000397036 LY6G6FQ5SQ64 297 aa11.28□□□□□ -0.6
MCF2L-209ENST00000397036 METTL11BQ5VVY1 283 aa11.28□□□□□ -0.6
MCF2L-209ENST00000397036 DUX4L9Q6RFH8 374 aaPredicted RBP11.28□□□□□ -0.6
MCF2L-209ENST00000397036 LYPD2Q6UXB3 125 aa11.28□□□□□ -0.6
MCF2L-209ENST00000397036 GLDNQ6ZMI3 551 aaPredicted RBP11.28□□□□□ -0.6
MCF2L-209ENST00000397036 ZNF841Q6ZN19 808 aa11.28□□□□□ -0.6
MCF2L-209ENST00000397036 SLC25A42Q86VD7 318 aa11.28□□□□□ -0.6
MCF2L-209ENST00000397036 H1FOOQ8IZA3 346 aaPredicted RBP11.28□□□□□ -0.6
MCF2L-209ENST00000397036 OR10A7Q8NGE5 316 aa11.28□□□□□ -0.6
MCF2L-209ENST00000397036 ZFAND1Q8TCF1 268 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms