RNA–Protein interactions for RNA: ENST00000397004.8

NUP98-204, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-204ENST00000397004 CXCL13O43927 109 aa11.89□□□□□ -0.51
NUP98-204ENST00000397004 PGLYRP1O75594 196 aaPredicted RBP11.89□□□□□ -0.51
NUP98-204ENST00000397004 CCDC71LQ8N9Z2 235 aa11.89□□□□□ -0.51
NUP98-204ENST00000397004 SPSB4Q96A44 273 aa11.89□□□□□ -0.51
NUP98-204ENST00000397004 TVP23CQ96ET8 276 aa11.89□□□□□ -0.51
NUP98-204ENST00000397004 DKKL1Q9UK85 242 aa11.89□□□□□ -0.51
NUP98-204ENST00000397004 ESPL1Q14674 2120 aa11.89□□□□□ -0.51
NUP98-204ENST00000397004 SEC14L6B5MCN3 397 aa11.89□□□□□ -0.51
NUP98-204ENST00000397004 RNPS1Q15287 305 aaKnown RBP11.89□□□□□ -0.51
NUP98-204ENST00000397004 THNSL2Q86YJ6 484 aa11.89□□□□□ -0.51
NUP98-204ENST00000397004 DMRTC2Q8IXT2 367 aaPredicted RBP11.89□□□□□ -0.51
NUP98-204ENST00000397004 GPR146Q96CH1 333 aa11.89□□□□□ -0.51
NUP98-204ENST00000397004 ADGRG7Q96K78 797 aa11.89□□□□□ -0.51
NUP98-204ENST00000397004 SMG1Q96Q15 3661 aaKnown RBP11.89□□□□□ -0.51
NUP98-204ENST00000397004 GPM6AP51674 278 aa11.89□□□□□ -0.51
NUP98-204ENST00000397004 RAC3P60763 192 aa11.89□□□□□ -0.51
NUP98-204ENST00000397004 RPL23AP62750 156 aaKnown RBP11.89□□□□□ -0.51
NUP98-204ENST00000397004 GUCD1Q96NT3 240 aa11.89□□□□□ -0.51
NUP98-204ENST00000397004 PFDN5Q99471 154 aa11.89□□□□□ -0.51
NUP98-204ENST00000397004 DEPPQ9NTK1 212 aa11.89□□□□□ -0.51
NUP98-204ENST00000397004 GNG13Q9P2W3 67 aa11.89□□□□□ -0.51
NUP98-204ENST00000397004 TRAV39A0A0B4J263 110 aa11.88□□□□□ -0.51
NUP98-204ENST00000397004 PINLYPA6NC86 204 aa11.88□□□□□ -0.51
NUP98-204ENST00000397004 NR2C1P13056 603 aa11.88□□□□□ -0.51
NUP98-204ENST00000397004 CCL4P13236 92 aa11.88□□□□□ -0.51
NUP98-204ENST00000397004 TAS2R30P59541 319 aa11.88□□□□□ -0.51
NUP98-204ENST00000397004 Q0VFX4 171 aa11.88□□□□□ -0.51
NUP98-204ENST00000397004 ZNF880Q6PDB4 577 aa11.88□□□□□ -0.51
NUP98-204ENST00000397004 Q6ZS49 121 aa11.88□□□□□ -0.51
NUP98-204ENST00000397004 COLCA1Q6ZS62 124 aa11.88□□□□□ -0.51
NUP98-204ENST00000397004 CMTM1Q8IZ96 169 aa11.88□□□□□ -0.51
NUP98-204ENST00000397004 CPNE4Q96A23 557 aaPredicted RBP11.88□□□□□ -0.51
NUP98-204ENST00000397004 INTS12Q96CB8 462 aaKnown RBP11.88□□□□□ -0.51
NUP98-204ENST00000397004 SYNGR1O43759 233 aa11.88□□□□□ -0.51
NUP98-204ENST00000397004 VDAC1P21796 283 aa11.88□□□□□ -0.51
NUP98-204ENST00000397004 OR56B2PQ8NGI1 322 aa11.88□□□□□ -0.51
NUP98-204ENST00000397004 CPT1CQ8TCG5 803 aa11.88□□□□□ -0.51
NUP98-204ENST00000397004 CA5BP1Q8WTZ4 195 aa11.88□□□□□ -0.51
NUP98-204ENST00000397004 C1QTNF5Q9BXJ0 243 aa11.88□□□□□ -0.51
NUP98-204ENST00000397004 ZNF816-ZNF321PA0A0X1KG74 233 aa11.88□□□□□ -0.51
NUP98-204ENST00000397004 GATCO43716 136 aaKnown RBP11.88□□□□□ -0.51
NUP98-204ENST00000397004 PGA5P0DJD9 388 aa11.88□□□□□ -0.51
NUP98-204ENST00000397004 HIST1H1BP16401 226 aaKnown RBP11.88□□□□□ -0.51
NUP98-204ENST00000397004 C9orf135Q5VTT2 229 aa11.88□□□□□ -0.51
NUP98-204ENST00000397004 ATP5SQ99766 215 aa11.88□□□□□ -0.51
NUP98-204ENST00000397004 GPR35Q9HC97 309 aa11.88□□□□□ -0.51
NUP98-204ENST00000397004 OR14J1Q9UGF5 321 aa11.88□□□□□ -0.51
NUP98-204ENST00000397004 LRRC3CA6NJW4 275 aa11.87□□□□□ -0.51
NUP98-204ENST00000397004 GALR2O43603 387 aaPredicted RBP11.87□□□□□ -0.51
NUP98-204ENST00000397004 RPS18P62269 152 aaKnown RBP11.87□□□□□ -0.51
NUP98-204ENST00000397004 SLC35E3Q7Z769 313 aa11.87□□□□□ -0.51
NUP98-204ENST00000397004 NOSIPQ9Y314 301 aaKnown RBP11.87□□□□□ -0.51
NUP98-204ENST00000397004 PTRH2Q9Y3E5 179 aaKnown RBP11.87□□□□□ -0.51
NUP98-204ENST00000397004 R4GN57 208 aa11.87□□□□□ -0.51
NUP98-204ENST00000397004 F10P00742 488 aa11.87□□□□□ -0.51
NUP98-204ENST00000397004 PSG2P11465 335 aa11.87□□□□□ -0.51
NUP98-204ENST00000397004 HLA-DRB3P79483 266 aa11.87□□□□□ -0.51
NUP98-204ENST00000397004 PRSS8Q16651 343 aa11.87□□□□□ -0.51
NUP98-204ENST00000397004 AAED1Q7RTV5 226 aa11.87□□□□□ -0.51
NUP98-204ENST00000397004 NIPSNAP3BQ9BS92 247 aa11.87□□□□□ -0.51
NUP98-204ENST00000397004 PCED1AQ9H1Q7 454 aa11.87□□□□□ -0.51
NUP98-204ENST00000397004 ZNF552Q9H707 407 aaPredicted RBP11.87□□□□□ -0.51
NUP98-204ENST00000397004 ZFP92A6NM28 416 aa11.87□□□□□ -0.51
NUP98-204ENST00000397004 WRBO00258 174 aa11.87□□□□□ -0.51
NUP98-204ENST00000397004 NGFP01138 241 aa11.87□□□□□ -0.51
NUP98-204ENST00000397004 IGKV1D-33P01593 117 aa11.87□□□□□ -0.51
NUP98-204ENST00000397004 IGKV1-33P01594 117 aa11.87□□□□□ -0.51
NUP98-204ENST00000397004 MMP9P14780 707 aa11.87□□□□□ -0.51
NUP98-204ENST00000397004 CD200P41217 278 aa11.87□□□□□ -0.51
NUP98-204ENST00000397004 CARD18P57730 90 aa11.87□□□□□ -0.51
NUP98-204ENST00000397004 RAB11AP62491 216 aa11.87□□□□□ -0.51
NUP98-204ENST00000397004 BEND4Q6ZU67 534 aa11.87□□□□□ -0.51
NUP98-204ENST00000397004 OR10D3Q8NH80 312 aa11.87□□□□□ -0.51
NUP98-204ENST00000397004 TNRC6BQ9UPQ9 1833 aaKnown RBP11.86□□□□□ -0.51
NUP98-204ENST00000397004 A0A1B0GU03 582 aa11.86□□□□□ -0.51
NUP98-204ENST00000397004 K7ESF4 209 aa11.86□□□□□ -0.51
NUP98-204ENST00000397004 RNF224P0DH78 156 aa11.86□□□□□ -0.51
NUP98-204ENST00000397004 WIPI1Q5MNZ9 446 aaPredicted RBP11.86□□□□□ -0.51
NUP98-204ENST00000397004 ZNF324BQ6AW86 544 aaPredicted RBP11.86□□□□□ -0.51
NUP98-204ENST00000397004 OR2T2Q6IF00 324 aa11.86□□□□□ -0.51
NUP98-204ENST00000397004 LCN15Q6UWW0 184 aa11.86□□□□□ -0.51
NUP98-204ENST00000397004 MRPL30Q8TCC3 161 aaKnown RBP11.86□□□□□ -0.51
NUP98-204ENST00000397004 SF3B5Q9BWJ5 86 aaKnown RBP11.86□□□□□ -0.51
NUP98-204ENST00000397004 C19orf25Q9UFG5 118 aaPredicted RBP11.86□□□□□ -0.51
NUP98-204ENST00000397004 MED12LQ86YW9 2145 aa11.86□□□□□ -0.51
NUP98-204ENST00000397004 FABP4P15090 132 aa11.86□□□□□ -0.51
NUP98-204ENST00000397004 SSR4P51571 173 aa11.86□□□□□ -0.51
NUP98-204ENST00000397004 OR51H1Q8NH63 302 aa11.86□□□□□ -0.51
NUP98-204ENST00000397004 SAP25Q8TEE9 199 aa11.86□□□□□ -0.51
NUP98-204ENST00000397004 OR1A1Q9P1Q5 309 aa11.86□□□□□ -0.51
NUP98-204ENST00000397004 A0A096LPE4 126 aa11.86□□□□□ -0.51
NUP98-204ENST00000397004 A0A1W2PPZ6 126 aa11.86□□□□□ -0.51
NUP98-204ENST00000397004 BTBD17A6NE02 478 aa11.86□□□□□ -0.51
NUP98-204ENST00000397004 CBR3O75828 277 aa11.86□□□□□ -0.51
NUP98-204ENST00000397004 EPHA8P29322 1005 aaPredicted RBP11.86□□□□□ -0.51
NUP98-204ENST00000397004 RND2P52198 227 aa11.86□□□□□ -0.51
NUP98-204ENST00000397004 ABLIM2Q6H8Q1 611 aa11.86□□□□□ -0.51
NUP98-204ENST00000397004 CLDN23Q96B33 292 aa11.86□□□□□ -0.51
NUP98-204ENST00000397004 REPIN1Q9BWE0 567 aaKnown RBP11.86□□□□□ -0.51
NUP98-204ENST00000397004 SLC25A31Q9H0C2 315 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms