RNA–Protein interactions for RNA: ENST00000396854.8

TM9SF1-202, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 1 (best) BASIC

Gene TM9SF1, Length 2,055 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-202ENST00000396854 IGHV1-46P01743 117 aa12.52□□□□□ -0.4
TM9SF1-202ENST00000396854 CD55P08174 381 aa12.52□□□□□ -0.4
TM9SF1-202ENST00000396854 AADACL3Q5VUY0 350 aa12.52□□□□□ -0.4
TM9SF1-202ENST00000396854 C11orf71Q6IPW1 123 aa12.52□□□□□ -0.4
TM9SF1-202ENST00000396854 PRSS54Q6PEW0 395 aa12.52□□□□□ -0.4
TM9SF1-202ENST00000396854 ASCL4Q6XD76 172 aa12.52□□□□□ -0.4
TM9SF1-202ENST00000396854 C1QL2Q7Z5L3 287 aa12.52□□□□□ -0.4
TM9SF1-202ENST00000396854 OR5D18Q8NGL1 313 aa12.52□□□□□ -0.4
TM9SF1-202ENST00000396854 OR1S2Q8NGQ3 325 aa12.52□□□□□ -0.4
TM9SF1-202ENST00000396854 RRNAD1Q96FB5 475 aaKnown RBP12.52□□□□□ -0.4
TM9SF1-202ENST00000396854 TM2D1Q9BX74 207 aa12.52□□□□□ -0.4
TM9SF1-202ENST00000396854 OR51I2Q9H344 312 aa12.52□□□□□ -0.4
TM9SF1-202ENST00000396854 MS4A5Q9H3V2 200 aa12.52□□□□□ -0.4
TM9SF1-202ENST00000396854 ZC4H2Q9NQZ6 224 aa12.52□□□□□ -0.4
TM9SF1-202ENST00000396854 CYTL1Q9NRR1 136 aa12.52□□□□□ -0.4
TM9SF1-202ENST00000396854 LRP5LA4QPB2 252 aa12.52□□□□□ -0.41
TM9SF1-202ENST00000396854 H0YIZ8 118 aa12.52□□□□□ -0.41
TM9SF1-202ENST00000396854 SPRY3O43610 288 aa12.52□□□□□ -0.41
TM9SF1-202ENST00000396854 CA11O75493 328 aa12.52□□□□□ -0.41
TM9SF1-202ENST00000396854 PPOXP50336 477 aa12.52□□□□□ -0.41
TM9SF1-202ENST00000396854 SLC9A3R2Q15599 337 aa12.52□□□□□ -0.41
TM9SF1-202ENST00000396854 ZNF573Q86YE8 665 aa12.52□□□□□ -0.41
TM9SF1-202ENST00000396854 CALHM1Q8IU99 346 aa12.52□□□□□ -0.41
TM9SF1-202ENST00000396854 ZSCAN4Q8NAM6 433 aaPredicted RBP12.52□□□□□ -0.41
TM9SF1-202ENST00000396854 C14orf79Q96F83 325 aa12.52□□□□□ -0.41
TM9SF1-202ENST00000396854 CYYR1Q96J86 154 aa12.52□□□□□ -0.41
TM9SF1-202ENST00000396854 TLNRD1Q9H1K6 362 aa12.52□□□□□ -0.41
TM9SF1-202ENST00000396854 DYNLRB1Q9NP97 96 aa12.52□□□□□ -0.41
TM9SF1-202ENST00000396854 IL19Q9UHD0 177 aa12.52□□□□□ -0.41
TM9SF1-202ENST00000396854 PRELID1Q9Y255 219 aa12.52□□□□□ -0.41
TM9SF1-202ENST00000396854 DOPEY2Q9Y3R5 2298 aa12.51□□□□□ -0.41
TM9SF1-202ENST00000396854 DCHS2Q6V1P9 2916 aa12.51□□□□□ -0.41
TM9SF1-202ENST00000396854 SERPINE3A8MV23 424 aa12.51□□□□□ -0.41
TM9SF1-202ENST00000396854 NUPL2O15504 423 aaKnown RBP12.51□□□□□ -0.41
TM9SF1-202ENST00000396854 KCNAB3O43448 404 aa12.51□□□□□ -0.41
TM9SF1-202ENST00000396854 SOD3P08294 240 aa12.51□□□□□ -0.41
TM9SF1-202ENST00000396854 TNFSF4P23510 183 aa12.51□□□□□ -0.41
TM9SF1-202ENST00000396854 HAAOP46952 286 aa12.51□□□□□ -0.41
TM9SF1-202ENST00000396854 SNU13P55769 128 aaKnown RBP12.51□□□□□ -0.41
TM9SF1-202ENST00000396854 DEFA5Q01523 94 aa12.51□□□□□ -0.41
TM9SF1-202ENST00000396854 ZNF154Q13106 437 aa12.51□□□□□ -0.41
TM9SF1-202ENST00000396854 ARL6IP1Q15041 203 aa12.51□□□□□ -0.41
TM9SF1-202ENST00000396854 SURF2Q15527 256 aaPredicted RBP12.51□□□□□ -0.41
TM9SF1-202ENST00000396854 ANKRD55Q3KP44 614 aa12.51□□□□□ -0.41
TM9SF1-202ENST00000396854 BAP18Q8IXM2 172 aa12.51□□□□□ -0.41
TM9SF1-202ENST00000396854 S100A13Q99584 98 aa12.51□□□□□ -0.41
TM9SF1-202ENST00000396854 AIFM2Q9BRQ8 373 aa12.51□□□□□ -0.41
TM9SF1-202ENST00000396854 PECRQ9BY49 303 aa12.51□□□□□ -0.41
TM9SF1-202ENST00000396854 PKIBQ9C010 78 aa12.51□□□□□ -0.41
TM9SF1-202ENST00000396854 PLEKHF2Q9H8W4 249 aa12.51□□□□□ -0.41
TM9SF1-202ENST00000396854 UBTD1Q9HAC8 227 aa12.51□□□□□ -0.41
TM9SF1-202ENST00000396854 IL36GQ9NZH8 169 aa12.51□□□□□ -0.41
TM9SF1-202ENST00000396854 DSCAMO60469 2012 aa12.51□□□□□ -0.41
TM9SF1-202ENST00000396854 GCN1Q92616 2671 aaKnown RBP12.51□□□□□ -0.41
TM9SF1-202ENST00000396854 NUDT19A8MXV4 375 aa12.5□□□□□ -0.41
TM9SF1-202ENST00000396854 ADAP1O75689 374 aa12.5□□□□□ -0.41
TM9SF1-202ENST00000396854 RPS2P15880 293 aaKnown RBP12.5□□□□□ -0.41
TM9SF1-202ENST00000396854 GATA4P43694 442 aa12.5□□□□□ -0.41
TM9SF1-202ENST00000396854 PDZK1IP1Q13113 114 aa12.5□□□□□ -0.41
TM9SF1-202ENST00000396854 ZNF295-AS1Q8N0V1 137 aa12.5□□□□□ -0.41
TM9SF1-202ENST00000396854 MEGF10Q96KG7 1140 aa12.5□□□□□ -0.41
TM9SF1-202ENST00000396854 AQP10Q96PS8 301 aa12.5□□□□□ -0.41
TM9SF1-202ENST00000396854 OR2V2Q96R30 315 aa12.5□□□□□ -0.41
TM9SF1-202ENST00000396854 ST6GALNAC5Q9BVH7 336 aa12.5□□□□□ -0.41
TM9SF1-202ENST00000396854 NKX6-2Q9C056 277 aaPredicted RBP12.5□□□□□ -0.41
TM9SF1-202ENST00000396854 METTL9Q9H1A3 318 aa12.5□□□□□ -0.41
TM9SF1-202ENST00000396854 CACNA1DQ01668 2161 aa12.5□□□□□ -0.41
TM9SF1-202ENST00000396854 SIGLEC5O15389 551 aa12.5□□□□□ -0.41
TM9SF1-202ENST00000396854 COL8A1P27658 744 aa12.5□□□□□ -0.41
TM9SF1-202ENST00000396854 BLVRBP30043 206 aaPredicted RBP12.5□□□□□ -0.41
TM9SF1-202ENST00000396854 TNFAIP6P98066 277 aaPredicted RBP12.5□□□□□ -0.41
TM9SF1-202ENST00000396854 SAXO1Q8IYX7 474 aa12.5□□□□□ -0.41
TM9SF1-202ENST00000396854 EMG1Q92979 244 aaKnown RBP12.5□□□□□ -0.41
TM9SF1-202ENST00000396854 EHFQ9NZC4 300 aa12.5□□□□□ -0.41
TM9SF1-202ENST00000396854 LRBAP50851 2863 aa12.5□□□□□ -0.41
TM9SF1-202ENST00000396854 J3QT63 122 aa12.49□□□□□ -0.41
TM9SF1-202ENST00000396854 ATG12O94817 140 aa12.49□□□□□ -0.41
TM9SF1-202ENST00000396854 TMEM225BP0DP42 221 aa12.49□□□□□ -0.41
TM9SF1-202ENST00000396854 PI3P19957 117 aa12.49□□□□□ -0.41
TM9SF1-202ENST00000396854 SERPINA2P20848 420 aa12.49□□□□□ -0.41
TM9SF1-202ENST00000396854 CPT2P23786 658 aa12.49□□□□□ -0.41
TM9SF1-202ENST00000396854 IL24Q13007 206 aa12.49□□□□□ -0.41
TM9SF1-202ENST00000396854 TESK1Q15569 626 aa12.49□□□□□ -0.41
TM9SF1-202ENST00000396854 HAGHLQ6PII5 290 aaPredicted RBP12.49□□□□□ -0.41
TM9SF1-202ENST00000396854 C20orf204Q6ZNR8 217 aa12.49□□□□□ -0.41
TM9SF1-202ENST00000396854 POC1AQ8NBT0 407 aa12.49□□□□□ -0.41
TM9SF1-202ENST00000396854 SCCPDHQ8NBX0 429 aa12.49□□□□□ -0.41
TM9SF1-202ENST00000396854 RNF141Q8WVD5 230 aa12.49□□□□□ -0.41
TM9SF1-202ENST00000396854 ITLN1Q8WWA0 313 aa12.49□□□□□ -0.41
TM9SF1-202ENST00000396854 NARS2Q96I59 477 aaKnown RBP12.49□□□□□ -0.41
TM9SF1-202ENST00000396854 C2orf50Q96LR7 162 aa12.49□□□□□ -0.41
TM9SF1-202ENST00000396854 DNAJB11Q9UBS4 358 aa12.49□□□□□ -0.41
TM9SF1-202ENST00000396854 TMEM218A2RU14 115 aa12.49□□□□□ -0.41
TM9SF1-202ENST00000396854 SDCBPO00560 298 aaPredicted RBP12.49□□□□□ -0.41
TM9SF1-202ENST00000396854 SPRY1O43609 319 aaPredicted RBP12.49□□□□□ -0.41
TM9SF1-202ENST00000396854 HTR3BO95264 441 aa12.49□□□□□ -0.41
TM9SF1-202ENST00000396854 GRPP07492 148 aa12.49□□□□□ -0.41
TM9SF1-202ENST00000396854 PET100P0DJ07 73 aa12.49□□□□□ -0.41
TM9SF1-202ENST00000396854 ECI1P42126 302 aa12.49□□□□□ -0.41
TM9SF1-202ENST00000396854 IL15RAQ13261 267 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms