RNA–Protein interactions for RNA: ENST00000396410.8

PDXDC1-202, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDXDC1, Length 4,521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-202ENST00000396410 H3BP45 60 aa9.87□□□□□ -0.83
PDXDC1-202ENST00000396410 F12P00748 615 aaPredicted RBP9.87□□□□□ -0.83
PDXDC1-202ENST00000396410 CEACAM6P40199 344 aa9.87□□□□□ -0.83
PDXDC1-202ENST00000396410 SELENOHQ8IZQ5 122 aaKnown RBP9.87□□□□□ -0.83
PDXDC1-202ENST00000396410 CLRN3Q8NCR9 226 aa9.87□□□□□ -0.83
PDXDC1-202ENST00000396410 OR2H2O95918 312 aa9.86□□□□□ -0.83
PDXDC1-202ENST00000396410 MUC1P15941 1255 aaPredicted RBP9.86□□□□□ -0.83
PDXDC1-202ENST00000396410 ID4P47928 161 aa9.86□□□□□ -0.83
PDXDC1-202ENST00000396410 LILRB2Q8N423 598 aa9.86□□□□□ -0.83
PDXDC1-202ENST00000396410 OR5C1Q8NGR4 320 aa9.86□□□□□ -0.83
PDXDC1-202ENST00000396410 AKR1E2Q96JD6 320 aa9.86□□□□□ -0.83
PDXDC1-202ENST00000396410 DECR2Q9NUI1 292 aa9.86□□□□□ -0.83
PDXDC1-202ENST00000396410 WASF3Q9UPY6 502 aa9.86□□□□□ -0.83
PDXDC1-202ENST00000396410 EP300Q09472 2414 aaPredicted RBP9.86□□□□□ -0.83
PDXDC1-202ENST00000396410 FAM74A7A6NL05 159 aa9.86□□□□□ -0.83
PDXDC1-202ENST00000396410 RNF212BA8MTL3 300 aa9.86□□□□□ -0.83
PDXDC1-202ENST00000396410 SMPD2O60906 423 aa9.86□□□□□ -0.83
PDXDC1-202ENST00000396410 IGHV1-2P23083 117 aa9.86□□□□□ -0.83
PDXDC1-202ENST00000396410 RAB5CP51148 216 aa9.86□□□□□ -0.83
PDXDC1-202ENST00000396410 FAM74A3Q4VXF1 159 aa9.86□□□□□ -0.83
PDXDC1-202ENST00000396410 BEND4Q6ZU67 534 aa9.86□□□□□ -0.83
PDXDC1-202ENST00000396410 PUSL1Q8N0Z8 303 aaKnown RBP9.86□□□□□ -0.83
PDXDC1-202ENST00000396410 LRTM2Q8N967 370 aa9.86□□□□□ -0.83
PDXDC1-202ENST00000396410 IGKV1D-13A0A0B4J2D9 117 aa9.86□□□□□ -0.83
PDXDC1-202ENST00000396410 IGKV1-13P0DP09 117 aa9.86□□□□□ -0.83
PDXDC1-202ENST00000396410 DVL1P1P54792 670 aaPredicted RBP9.86□□□□□ -0.83
PDXDC1-202ENST00000396410 SRSF3P84103 164 aaKnown RBP9.86□□□□□ -0.83
PDXDC1-202ENST00000396410 ZNF718Q3SXZ3 478 aa9.86□□□□□ -0.83
PDXDC1-202ENST00000396410 CXorf66Q5JRM2 361 aaPredicted RBP9.86□□□□□ -0.83
PDXDC1-202ENST00000396410 MRPL30Q8TCC3 161 aaKnown RBP9.86□□□□□ -0.83
PDXDC1-202ENST00000396410 SEC11CQ9BY50 192 aa9.86□□□□□ -0.83
PDXDC1-202ENST00000396410 ESRP2Q9H6T0 727 aaKnown RBP9.86□□□□□ -0.83
PDXDC1-202ENST00000396410 RNF150Q9ULK6 438 aa9.86□□□□□ -0.83
PDXDC1-202ENST00000396410 LOC105371267A0A1B0GV96 52 aa9.86□□□□□ -0.83
PDXDC1-202ENST00000396410 PGLYRP1O75594 196 aaPredicted RBP9.86□□□□□ -0.83
PDXDC1-202ENST00000396410 SNRNP70P08621 437 aaKnown RBP9.86□□□□□ -0.83
PDXDC1-202ENST00000396410 SEC11BP0C7V7 166 aa9.86□□□□□ -0.83
PDXDC1-202ENST00000396410 LTC4SQ16873 150 aa9.86□□□□□ -0.83
PDXDC1-202ENST00000396410 FAM122CQ6P4D5 195 aa9.86□□□□□ -0.83
PDXDC1-202ENST00000396410 SAV1Q9H4B6 383 aaPredicted RBP9.86□□□□□ -0.83
PDXDC1-202ENST00000396410 LIN7CQ9NUP9 197 aaKnown RBP9.86□□□□□ -0.83
PDXDC1-202ENST00000396410 AMDHD2Q9Y303 409 aa9.86□□□□□ -0.83
PDXDC1-202ENST00000396410 FBXO7Q9Y3I1 522 aa9.86□□□□□ -0.83
PDXDC1-202ENST00000396410 MED13Q9UHV7 2174 aa9.86□□□□□ -0.83
PDXDC1-202ENST00000396410 NCKAP5O14513 1909 aa9.86□□□□□ -0.83
PDXDC1-202ENST00000396410 CHST1O43916 411 aa9.85□□□□□ -0.83
PDXDC1-202ENST00000396410 NAPSAO96009 420 aa9.85□□□□□ -0.83
PDXDC1-202ENST00000396410 PSG2P11465 335 aa9.85□□□□□ -0.83
PDXDC1-202ENST00000396410 F2RP25116 425 aa9.85□□□□□ -0.83
PDXDC1-202ENST00000396410 SRSF6Q13247 344 aaKnown RBP9.85□□□□□ -0.83
PDXDC1-202ENST00000396410 VHLLQ6RSH7 139 aa9.85□□□□□ -0.83
PDXDC1-202ENST00000396410 TLNRD1Q9H1K6 362 aa9.85□□□□□ -0.83
PDXDC1-202ENST00000396410 OR51I2Q9H344 312 aa9.85□□□□□ -0.83
PDXDC1-202ENST00000396410 KPTNQ9Y664 436 aa9.85□□□□□ -0.83
PDXDC1-202ENST00000396410 IL15RAQ13261 267 aa9.85□□□□□ -0.83
PDXDC1-202ENST00000396410 OR2B11Q5JQS5 317 aa9.85□□□□□ -0.83
PDXDC1-202ENST00000396410 ZNF808Q8N4W9 903 aaPredicted RBP9.85□□□□□ -0.83
PDXDC1-202ENST00000396410 OR1A1Q9P1Q5 309 aa9.85□□□□□ -0.83
PDXDC1-202ENST00000396410 TRAV24A0A0B4J272 114 aa9.85□□□□□ -0.83
PDXDC1-202ENST00000396410 TMEM30CPA0ZSE6 113 aa9.85□□□□□ -0.83
PDXDC1-202ENST00000396410 H0Y980 276 aa9.85□□□□□ -0.83
PDXDC1-202ENST00000396410 HAND1O96004 215 aa9.85□□□□□ -0.83
PDXDC1-202ENST00000396410 IAPPP10997 89 aa9.85□□□□□ -0.83
PDXDC1-202ENST00000396410 MZT1Q08AG7 82 aa9.85□□□□□ -0.83
PDXDC1-202ENST00000396410 SMUG1Q53HV7 270 aa9.85□□□□□ -0.83
PDXDC1-202ENST00000396410 GALMQ96C23 342 aa9.85□□□□□ -0.83
PDXDC1-202ENST00000396410 SMIM8Q96KF7 97 aa9.85□□□□□ -0.83
PDXDC1-202ENST00000396410 NRIP2Q9BQI9 281 aa9.85□□□□□ -0.83
PDXDC1-202ENST00000396410 GALR2O43603 387 aaPredicted RBP9.84□□□□□ -0.83
PDXDC1-202ENST00000396410 FAM157CP0CG43 387 aa9.84□□□□□ -0.83
PDXDC1-202ENST00000396410 EDDM3AQ14507 147 aa9.84□□□□□ -0.83
PDXDC1-202ENST00000396410 HMGN3Q15651 99 aa9.84□□□□□ -0.83
PDXDC1-202ENST00000396410 GUK1Q16774 197 aa9.84□□□□□ -0.83
PDXDC1-202ENST00000396410 Q6ZT83 130 aa9.84□□□□□ -0.83
PDXDC1-202ENST00000396410 CBLN2Q8IUK8 224 aa9.84□□□□□ -0.83
PDXDC1-202ENST00000396410 ZDHHC11Q9H8X9 412 aa9.84□□□□□ -0.83
PDXDC1-202ENST00000396410 DUXBA0A1W2PPF3 345 aa9.84□□□□□ -0.83
PDXDC1-202ENST00000396410 SS18L1O75177 396 aaPredicted RBP9.84□□□□□ -0.83
PDXDC1-202ENST00000396410 C1QL1O75973 258 aa9.84□□□□□ -0.83
PDXDC1-202ENST00000396410 OR10Z1Q8NGY1 313 aa9.84□□□□□ -0.83
PDXDC1-202ENST00000396410 KLF14Q8TD94 323 aaPredicted RBP9.84□□□□□ -0.83
PDXDC1-202ENST00000396410 FGF23Q9GZV9 251 aaPredicted RBP9.84□□□□□ -0.83
PDXDC1-202ENST00000396410 RCC2Q9P258 522 aaKnown RBP9.84□□□□□ -0.83
PDXDC1-202ENST00000396410 PCNX2A6NKB5 2137 aa9.84□□□□□ -0.83
PDXDC1-202ENST00000396410 ZNF891A8MT65 544 aaPredicted RBP9.84□□□□□ -0.83
PDXDC1-202ENST00000396410 CDK2AP1O14519 115 aa9.84□□□□□ -0.83
PDXDC1-202ENST00000396410 CEBPDP49716 269 aaPredicted RBP9.84□□□□□ -0.83
PDXDC1-202ENST00000396410 DYNLT3P51808 116 aa9.84□□□□□ -0.83
PDXDC1-202ENST00000396410 RND3P61587 244 aa9.84□□□□□ -0.83
PDXDC1-202ENST00000396410 CATR1Q13166 79 aa9.84□□□□□ -0.83
PDXDC1-202ENST00000396410 ALKBH6Q3KRA9 238 aa9.84□□□□□ -0.83
PDXDC1-202ENST00000396410 SHEQ5VZ18 495 aa9.84□□□□□ -0.83
PDXDC1-202ENST00000396410 VWA1Q6PCB0 445 aa9.84□□□□□ -0.83
PDXDC1-202ENST00000396410 BSCL2Q96G97 398 aaPredicted RBP9.84□□□□□ -0.83
PDXDC1-202ENST00000396410 SH3BGRL3Q9H299 93 aa9.84□□□□□ -0.83
PDXDC1-202ENST00000396410 CACNG5Q9UF02 275 aa9.84□□□□□ -0.83
PDXDC1-202ENST00000396410 MEX3AA1L020 520 aaKnown RBP9.84□□□□□ -0.83
PDXDC1-202ENST00000396410 J3QW42 95 aa9.84□□□□□ -0.83
PDXDC1-202ENST00000396410 DFFBO76075 338 aa9.84□□□□□ -0.83
PDXDC1-202ENST00000396410 OR13C7P0DN81 318 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms