RNA–Protein interactions for RNA: ENST00000396342.6

DDR1-229, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 675 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-229ENST00000396342 FAM90A9PA6NNJ1 464 aa12.99□□□□□ -0.33
DDR1-229ENST00000396342 FAM90A12PA8MX19 464 aa12.99□□□□□ -0.33
DDR1-229ENST00000396342 FAM90A5PA8MXJ8 464 aa12.99□□□□□ -0.33
DDR1-229ENST00000396342 E9PI62 339 aa12.99□□□□□ -0.33
DDR1-229ENST00000396342 AIPO00170 330 aa12.99□□□□□ -0.33
DDR1-229ENST00000396342 ORC5O43913 435 aa12.99□□□□□ -0.33
DDR1-229ENST00000396342 CDRT1O95170 752 aa12.99□□□□□ -0.33
DDR1-229ENST00000396342 BAG2O95816 211 aa12.99□□□□□ -0.33
DDR1-229ENST00000396342 FAM90A15PP0C7V4 464 aa12.99□□□□□ -0.33
DDR1-229ENST00000396342 FAM90A13PP0C7W8 464 aa12.99□□□□□ -0.33
DDR1-229ENST00000396342 FAM90A14PP0C7W9 464 aa12.99□□□□□ -0.33
DDR1-229ENST00000396342 FAM90A24PP0C7X0 464 aa12.99□□□□□ -0.33
DDR1-229ENST00000396342 SSTR5P35346 364 aa12.99□□□□□ -0.33
DDR1-229ENST00000396342 ZNF816Q0VGE8 651 aaPredicted RBP12.99□□□□□ -0.33
DDR1-229ENST00000396342 PNLIPRP3Q17RR3 467 aa12.99□□□□□ -0.33
DDR1-229ENST00000396342 SLC22A6Q4U2R8 563 aa12.99□□□□□ -0.33
DDR1-229ENST00000396342 NHLRC3Q5JS37 347 aa12.99□□□□□ -0.33
DDR1-229ENST00000396342 TRAT1Q6PIZ9 186 aa12.99□□□□□ -0.33
DDR1-229ENST00000396342 OR2W3Q7Z3T1 314 aa12.99□□□□□ -0.33
DDR1-229ENST00000396342 TGIF2LXQ8IUE1 241 aa12.99□□□□□ -0.33
DDR1-229ENST00000396342 MRPL41Q8IXM3 137 aaKnown RBP12.99□□□□□ -0.33
DDR1-229ENST00000396342 LINC00482Q8N8I6 264 aa12.99□□□□□ -0.33
DDR1-229ENST00000396342 OR8H1Q8NGG4 311 aa12.99□□□□□ -0.33
DDR1-229ENST00000396342 IFT22Q9H7X7 185 aa12.99□□□□□ -0.33
DDR1-229ENST00000396342 KCNIP1Q9NZI2 227 aa12.99□□□□□ -0.33
DDR1-229ENST00000396342 AASSQ9UDR5 926 aa12.99□□□□□ -0.33
DDR1-229ENST00000396342 EXOSC1Q9Y3B2 195 aaKnown RBP12.99□□□□□ -0.33
DDR1-229ENST00000396342 PLXNB1O43157 2135 aa12.98□□□□□ -0.33
DDR1-229ENST00000396342 A0A1W2PPI3 338 aa12.98□□□□□ -0.33
DDR1-229ENST00000396342 MOSP00540 346 aa12.98□□□□□ -0.33
DDR1-229ENST00000396342 AMY1AP04745 511 aa12.98□□□□□ -0.33
DDR1-229ENST00000396342 AMY2AP04746 511 aa12.98□□□□□ -0.33
DDR1-229ENST00000396342 OR5H8P0DN80 308 aa12.98□□□□□ -0.33
DDR1-229ENST00000396342 CGB3P0DN86 165 aa12.98□□□□□ -0.33
DDR1-229ENST00000396342 CGB7P0DN87 165 aa12.98□□□□□ -0.33
DDR1-229ENST00000396342 VDAC1P21796 283 aa12.98□□□□□ -0.33
DDR1-229ENST00000396342 GTF2A1P52655 376 aaPredicted RBP12.98□□□□□ -0.33
DDR1-229ENST00000396342 ASCL4Q6XD76 172 aa12.98□□□□□ -0.33
DDR1-229ENST00000396342 RNF144BQ7Z419 303 aa12.98□□□□□ -0.33
DDR1-229ENST00000396342 JAGN1Q8N5M9 183 aa12.98□□□□□ -0.33
DDR1-229ENST00000396342 SETD9Q8NE22 299 aa12.98□□□□□ -0.33
DDR1-229ENST00000396342 PLPPR1Q8TBJ4 325 aa12.98□□□□□ -0.33
DDR1-229ENST00000396342 CCDC107Q8WV48 283 aa12.98□□□□□ -0.33
DDR1-229ENST00000396342 THRSPQ92748 146 aa12.98□□□□□ -0.33
DDR1-229ENST00000396342 MRPS24Q96EL2 167 aaKnown RBP12.98□□□□□ -0.33
DDR1-229ENST00000396342 NOL4LQ96MY1 436 aaPredicted RBP12.98□□□□□ -0.33
DDR1-229ENST00000396342 RDH12Q96NR8 316 aa12.98□□□□□ -0.33
DDR1-229ENST00000396342 LIN7CQ9NUP9 197 aaKnown RBP12.98□□□□□ -0.33
DDR1-229ENST00000396342 MRPS18AQ9NVS2 196 aaKnown RBP12.98□□□□□ -0.33
DDR1-229ENST00000396342 BABAM2Q9NXR7 383 aa12.98□□□□□ -0.33
DDR1-229ENST00000396342 SIRT4Q9Y6E7 314 aaPredicted RBP12.98□□□□□ -0.33
DDR1-229ENST00000396342 IGHV1-3A0A0C4DH29 117 aa12.97□□□□□ -0.33
DDR1-229ENST00000396342 H3BNX3 289 aa12.97□□□□□ -0.33
DDR1-229ENST00000396342 GEMIN2O14893 280 aaKnown RBP12.97□□□□□ -0.33
DDR1-229ENST00000396342 RAMP3O60896 148 aa12.97□□□□□ -0.33
DDR1-229ENST00000396342 IGHG2P01859 326 aa12.97□□□□□ -0.33
DDR1-229ENST00000396342 GABRB1P18505 474 aa12.97□□□□□ -0.33
DDR1-229ENST00000396342 HOXD3P31249 432 aaPredicted RBP12.97□□□□□ -0.33
DDR1-229ENST00000396342 REG1BP48304 166 aa12.97□□□□□ -0.33
DDR1-229ENST00000396342 THBS3P49746 956 aa12.97□□□□□ -0.33
DDR1-229ENST00000396342 TAS2R43P59537 309 aa12.97□□□□□ -0.33
DDR1-229ENST00000396342 DGCR2P98153 550 aa12.97□□□□□ -0.33
DDR1-229ENST00000396342 Q3ZCU0 254 aa12.97□□□□□ -0.33
DDR1-229ENST00000396342 C10orf99Q6UWK7 81 aa12.97□□□□□ -0.33
DDR1-229ENST00000396342 C8orf86Q6ZUL3 223 aa12.97□□□□□ -0.33
DDR1-229ENST00000396342 PQLC1Q8N2U9 271 aa12.97□□□□□ -0.33
DDR1-229ENST00000396342 STPG2Q8N412 459 aa12.97□□□□□ -0.33
DDR1-229ENST00000396342 C8orf31Q8N9H6 132 aa12.97□□□□□ -0.33
DDR1-229ENST00000396342 Q8NFD4 153 aa12.97□□□□□ -0.33
DDR1-229ENST00000396342 OR8U1Q8NH10 309 aa12.97□□□□□ -0.33
DDR1-229ENST00000396342 SMIM19Q96E16 107 aa12.97□□□□□ -0.33
DDR1-229ENST00000396342 ZNF184Q99676 751 aaPredicted RBP12.97□□□□□ -0.33
DDR1-229ENST00000396342 FGF20Q9NP95 211 aaPredicted RBP12.97□□□□□ -0.33
DDR1-229ENST00000396342 SMPD3Q9NY59 655 aaPredicted RBP12.97□□□□□ -0.33
DDR1-229ENST00000396342 ETAA1Q9NY74 926 aa12.97□□□□□ -0.33
DDR1-229ENST00000396342 A0A1W2PPE3 182 aa12.96□□□□□ -0.33
DDR1-229ENST00000396342 K7EIL1 84 aa12.96□□□□□ -0.33
DDR1-229ENST00000396342 CD1BP29016 333 aa12.96□□□□□ -0.33
DDR1-229ENST00000396342 Q499Y3 187 aa12.96□□□□□ -0.33
DDR1-229ENST00000396342 YIF1BQ5BJH7 314 aa12.96□□□□□ -0.33
DDR1-229ENST00000396342 TTC23Q5W5X9 447 aa12.96□□□□□ -0.33
DDR1-229ENST00000396342 ZNF529Q6P280 563 aa12.96□□□□□ -0.33
DDR1-229ENST00000396342 TMEM65Q6PI78 240 aa12.96□□□□□ -0.33
DDR1-229ENST00000396342 IZUMO1Q8IYV9 350 aa12.96□□□□□ -0.33
DDR1-229ENST00000396342 OR5M8Q8NGP6 311 aa12.96□□□□□ -0.33
DDR1-229ENST00000396342 EAF1Q96JC9 268 aaPredicted RBP12.96□□□□□ -0.33
DDR1-229ENST00000396342 S100A14Q9HCY8 104 aa12.96□□□□□ -0.33
DDR1-229ENST00000396342 GFOD1Q9NXC2 390 aa12.96□□□□□ -0.33
DDR1-229ENST00000396342 LINC00527Q9UJ94 153 aa12.96□□□□□ -0.33
DDR1-229ENST00000396342 IGHV3-72A0A0B4J1Y9 119 aa12.95□□□□□ -0.34
DDR1-229ENST00000396342 TRAV39A0A0B4J263 110 aa12.95□□□□□ -0.34
DDR1-229ENST00000396342 CA11O75493 328 aa12.95□□□□□ -0.34
DDR1-229ENST00000396342 LIMS3P0CW19 117 aa12.95□□□□□ -0.34
DDR1-229ENST00000396342 LIMS4P0CW20 117 aa12.95□□□□□ -0.34
DDR1-229ENST00000396342 SOX6P35712 828 aa12.95□□□□□ -0.34
DDR1-229ENST00000396342 GPR12P47775 334 aa12.95□□□□□ -0.34
DDR1-229ENST00000396342 GPR50Q13585 617 aa12.95□□□□□ -0.34
DDR1-229ENST00000396342 PRR18Q8N4B5 295 aa12.95□□□□□ -0.34
DDR1-229ENST00000396342 LINC00311Q8N616 119 aa12.95□□□□□ -0.34
DDR1-229ENST00000396342 CYGBQ8WWM9 190 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 132.9 ms