RNA–Protein interactions for RNA: ENST00000396096.6

NUP50-202, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-202ENST00000396096 LYPD6BQ8NI32 183 aa14.23□□□□□ -0.13
NUP50-202ENST00000396096 KLF14Q8TD94 323 aaPredicted RBP14.23□□□□□ -0.13
NUP50-202ENST00000396096 WFDC1Q9HC57 220 aa14.23□□□□□ -0.13
NUP50-202ENST00000396096 HES4Q9HCC6 221 aa14.23□□□□□ -0.13
NUP50-202ENST00000396096 CARHSP1Q9Y2V2 147 aaKnown RBP14.23□□□□□ -0.13
NUP50-202ENST00000396096 C3orf80F5H4A9 247 aa14.23□□□□□ -0.13
NUP50-202ENST00000396096 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP14.23□□□□□ -0.13
NUP50-202ENST00000396096 S100GP29377 79 aa14.23□□□□□ -0.13
NUP50-202ENST00000396096 HOXC12P31275 282 aa14.23□□□□□ -0.13
NUP50-202ENST00000396096 NKX2-1P43699 371 aaPredicted RBP14.23□□□□□ -0.13
NUP50-202ENST00000396096 DEFA5Q01523 94 aa14.23□□□□□ -0.13
NUP50-202ENST00000396096 OR8G1Q15617 311 aa14.23□□□□□ -0.13
NUP50-202ENST00000396096 PLPPR1Q8TBJ4 325 aa14.23□□□□□ -0.13
NUP50-202ENST00000396096 ARID1AO14497 2285 aa14.22□□□□□ -0.13
NUP50-202ENST00000396096 SH2D1BO14796 132 aa14.22□□□□□ -0.13
NUP50-202ENST00000396096 FBXO24O75426 580 aa14.22□□□□□ -0.13
NUP50-202ENST00000396096 MMP9P14780 707 aa14.22□□□□□ -0.13
NUP50-202ENST00000396096 ADCYAP1P18509 176 aa14.22□□□□□ -0.13
NUP50-202ENST00000396096 F2RP25116 425 aa14.22□□□□□ -0.13
NUP50-202ENST00000396096 MPV17P39210 176 aa14.22□□□□□ -0.13
NUP50-202ENST00000396096 SRSF3P84103 164 aaKnown RBP14.22□□□□□ -0.13
NUP50-202ENST00000396096 SPAG16Q8N0X2 631 aa14.22□□□□□ -0.13
NUP50-202ENST00000396096 OR8G5Q8NG78 346 aa14.22□□□□□ -0.13
NUP50-202ENST00000396096 HRH4Q9H3N8 390 aa14.22□□□□□ -0.13
NUP50-202ENST00000396096 OBP2BQ9NPH6 170 aa14.22□□□□□ -0.13
NUP50-202ENST00000396096 FAM212BQ9NTI7 297 aaPredicted RBP14.22□□□□□ -0.13
NUP50-202ENST00000396096 MBNL3Q9NUK0 354 aaKnown RBP14.22□□□□□ -0.13
NUP50-202ENST00000396096 WIPI2Q9Y4P8 454 aa14.22□□□□□ -0.13
NUP50-202ENST00000396096 C1QTNF9BB2RNN3 333 aa14.21□□□□□ -0.13
NUP50-202ENST00000396096 DNASE2O00115 360 aaPredicted RBP14.21□□□□□ -0.13
NUP50-202ENST00000396096 SIRPB1O00241 398 aa14.21□□□□□ -0.13
NUP50-202ENST00000396096 CDIPTO14735 213 aa14.21□□□□□ -0.13
NUP50-202ENST00000396096 SIGLEC5O15389 551 aa14.21□□□□□ -0.13
NUP50-202ENST00000396096 ADAM20O43506 726 aa14.21□□□□□ -0.13
NUP50-202ENST00000396096 NXPH2O95156 264 aa14.21□□□□□ -0.13
NUP50-202ENST00000396096 SPP1P10451 314 aa14.21□□□□□ -0.13
NUP50-202ENST00000396096 PVALBP20472 110 aaPredicted RBP14.21□□□□□ -0.13
NUP50-202ENST00000396096 F2RL1P55085 397 aa14.21□□□□□ -0.13
NUP50-202ENST00000396096 OR2C3Q8N628 320 aa14.21□□□□□ -0.13
NUP50-202ENST00000396096 NKX6-2Q9C056 277 aaPredicted RBP14.21□□□□□ -0.13
NUP50-202ENST00000396096 PURGQ9UJV8 347 aaKnown RBP14.21□□□□□ -0.13
NUP50-202ENST00000396096 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP14.21□□□□□ -0.14
NUP50-202ENST00000396096 IGLV1-44P01699 117 aa14.21□□□□□ -0.14
NUP50-202ENST00000396096 KITLGP21583 273 aa14.21□□□□□ -0.14
NUP50-202ENST00000396096 EWSR1Q01844 656 aaKnown RBP eCLIP14.21□□□□□ -0.14
NUP50-202ENST00000396096 ID3Q02535 119 aa14.21□□□□□ -0.14
NUP50-202ENST00000396096 FOXF2Q12947 444 aa14.21□□□□□ -0.14
NUP50-202ENST00000396096 HMGN3Q15651 99 aa14.21□□□□□ -0.14
NUP50-202ENST00000396096 IGFL3Q6UXB1 125 aa14.21□□□□□ -0.14
NUP50-202ENST00000396096 SVBPQ8N300 66 aa14.21□□□□□ -0.14
NUP50-202ENST00000396096 OR10V1Q8NGI7 309 aa14.21□□□□□ -0.14
NUP50-202ENST00000396096 AKR1E2Q96JD6 320 aa14.21□□□□□ -0.14
NUP50-202ENST00000396096 TAAR6Q96RI8 345 aa14.21□□□□□ -0.14
NUP50-202ENST00000396096 TLNRD1Q9H1K6 362 aa14.21□□□□□ -0.14
NUP50-202ENST00000396096 UQCC1Q9NVA1 299 aa14.21□□□□□ -0.14
NUP50-202ENST00000396096 DKK4Q9UBT3 224 aa14.21□□□□□ -0.14
NUP50-202ENST00000396096 ERRFI1Q9UJM3 462 aaPredicted RBP14.21□□□□□ -0.14
NUP50-202ENST00000396096 H0YL77 283 aa14.2□□□□□ -0.14
NUP50-202ENST00000396096 MLNRO43193 412 aa14.2□□□□□ -0.14
NUP50-202ENST00000396096 WDR1O75083 606 aa14.2□□□□□ -0.14
NUP50-202ENST00000396096 TNFSF13O75888 250 aa14.2□□□□□ -0.14
NUP50-202ENST00000396096 CGAP01215 116 aa14.2□□□□□ -0.14
NUP50-202ENST00000396096 SLC25A6P12236 298 aa14.2□□□□□ -0.14
NUP50-202ENST00000396096 LMO1P25800 156 aa14.2□□□□□ -0.14
NUP50-202ENST00000396096 AKR1C2P52895 323 aa14.2□□□□□ -0.14
NUP50-202ENST00000396096 NHLH2Q02577 135 aa14.2□□□□□ -0.14
NUP50-202ENST00000396096 AKR1C1Q04828 323 aa14.2□□□□□ -0.14
NUP50-202ENST00000396096 ZNF169Q14929 603 aaPredicted RBP14.2□□□□□ -0.14
NUP50-202ENST00000396096 FIP1L1Q6UN15 594 aaKnown RBP14.2□□□□□ -0.14
NUP50-202ENST00000396096 CLEC9AQ6UXN8 241 aa14.2□□□□□ -0.14
NUP50-202ENST00000396096 ZADH2Q8N4Q0 377 aa14.2□□□□□ -0.14
NUP50-202ENST00000396096 TSNAXQ99598 290 aaKnown RBP14.2□□□□□ -0.14
NUP50-202ENST00000396096 SEC11CQ9BY50 192 aa14.2□□□□□ -0.14
NUP50-202ENST00000396096 LYRM2Q9NU23 88 aaPredicted RBP14.2□□□□□ -0.14
NUP50-202ENST00000396096 OR1A1Q9P1Q5 309 aa14.2□□□□□ -0.14
NUP50-202ENST00000396096 TSPAN4O14817 238 aa14.19□□□□□ -0.14
NUP50-202ENST00000396096 AGFG2O95081 481 aa14.19□□□□□ -0.14
NUP50-202ENST00000396096 CECR9P0C854 216 aa14.19□□□□□ -0.14
NUP50-202ENST00000396096 DANCRP0C864 163 aa14.19□□□□□ -0.14
NUP50-202ENST00000396096 EIF2S3P41091 472 aaKnown RBP14.19□□□□□ -0.14
NUP50-202ENST00000396096 P2RY6Q15077 328 aa14.19□□□□□ -0.14
NUP50-202ENST00000396096 TESK1Q15569 626 aa14.19□□□□□ -0.14
NUP50-202ENST00000396096 Q6ZRG5 221 aa14.19□□□□□ -0.14
NUP50-202ENST00000396096 C11orf53Q8IXP5 236 aa14.19□□□□□ -0.14
NUP50-202ENST00000396096 C1orf174Q8IYL3 243 aa14.19□□□□□ -0.14
NUP50-202ENST00000396096 FAM169BQ8N8A8 192 aa14.19□□□□□ -0.14
NUP50-202ENST00000396096 GPHA2Q96T91 129 aa14.19□□□□□ -0.14
NUP50-202ENST00000396096 BCL2L14Q9BZR8 327 aa14.19□□□□□ -0.14
NUP50-202ENST00000396096 CXXC4Q9H2H0 198 aa14.19□□□□□ -0.14
NUP50-202ENST00000396096 PLEKHF2Q9H8W4 249 aa14.19□□□□□ -0.14
NUP50-202ENST00000396096 TREM1Q9NP99 234 aa14.19□□□□□ -0.14
NUP50-202ENST00000396096 TAAR3PQ9P1P4 343 aa14.19□□□□□ -0.14
NUP50-202ENST00000396096 A0A1B0GWJ7 208 aa14.18□□□□□ -0.14
NUP50-202ENST00000396096 MBD3L4A6NDZ8 208 aaPredicted RBP14.18□□□□□ -0.14
NUP50-202ENST00000396096 MBD3L3A6NE82 208 aaPredicted RBP14.18□□□□□ -0.14
NUP50-202ENST00000396096 MBD3L5A6NJ08 208 aaPredicted RBP14.18□□□□□ -0.14
NUP50-202ENST00000396096 HAND1O96004 215 aa14.18□□□□□ -0.14
NUP50-202ENST00000396096 IGLV2-14P01704 120 aa14.18□□□□□ -0.14
NUP50-202ENST00000396096 CD5P06127 495 aa14.18□□□□□ -0.14
NUP50-202ENST00000396096 MUC1P15941 1255 aaPredicted RBP14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms