RNA–Protein interactions for RNA: ENST00000394991.7

SNCA-205, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-205ENST00000394991 OR10AC1Q8NH08 325 aa12.28□□□□□ -0.44
SNCA-205ENST00000394991 PLPPR1Q8TBJ4 325 aa12.28□□□□□ -0.44
SNCA-205ENST00000394991 DCUN1D4Q92564 292 aa12.28□□□□□ -0.44
SNCA-205ENST00000394991 RFKQ969G6 155 aa12.28□□□□□ -0.44
SNCA-205ENST00000394991 S1PR3Q99500 378 aa12.28□□□□□ -0.44
SNCA-205ENST00000394991 SLC29A1Q99808 456 aa12.28□□□□□ -0.44
SNCA-205ENST00000394991 KLK15Q9H2R5 256 aa12.28□□□□□ -0.44
SNCA-205ENST00000394991 NCOR1P1Q9H4R4 102 aa12.28□□□□□ -0.44
SNCA-205ENST00000394991 RHOFQ9HBH0 211 aa12.28□□□□□ -0.44
SNCA-205ENST00000394991 ZNF736B4DX44 427 aaPredicted RBP12.27□□□□□ -0.45
SNCA-205ENST00000394991 OR2T7P0C7T2 308 aa12.27□□□□□ -0.45
SNCA-205ENST00000394991 GP9P14770 177 aa12.27□□□□□ -0.45
SNCA-205ENST00000394991 ZNF20P17024 532 aa12.27□□□□□ -0.45
SNCA-205ENST00000394991 C21orf33P30042 268 aaPredicted RBP12.27□□□□□ -0.45
SNCA-205ENST00000394991 RUNX1Q01196 453 aa12.27□□□□□ -0.45
SNCA-205ENST00000394991 ZNF616Q08AN1 781 aa12.27□□□□□ -0.45
SNCA-205ENST00000394991 TP53I3Q53FA7 332 aa12.27□□□□□ -0.45
SNCA-205ENST00000394991 PAN3Q58A45 887 aaKnown RBP12.27□□□□□ -0.45
SNCA-205ENST00000394991 SLC16A12Q6ZSM3 486 aa12.27□□□□□ -0.45
SNCA-205ENST00000394991 SAXO1Q8IYX7 474 aa12.27□□□□□ -0.45
SNCA-205ENST00000394991 FAM71E2Q8N5Q1 922 aa12.27□□□□□ -0.45
SNCA-205ENST00000394991 ZNF491Q8N8L2 437 aa12.27□□□□□ -0.45
SNCA-205ENST00000394991 OR13C9Q8NGT0 318 aa12.27□□□□□ -0.45
SNCA-205ENST00000394991 TRUB1Q8WWH5 349 aaKnown RBP12.27□□□□□ -0.45
SNCA-205ENST00000394991 ISOC1Q96CN7 298 aa12.27□□□□□ -0.45
SNCA-205ENST00000394991 OR5B12Q96R08 314 aa12.27□□□□□ -0.45
SNCA-205ENST00000394991 MBOAT4Q96T53 435 aa12.27□□□□□ -0.45
SNCA-205ENST00000394991 NEK6Q9HC98 313 aa12.27□□□□□ -0.45
SNCA-205ENST00000394991 NKX1-2Q9UD57 310 aaPredicted RBP12.27□□□□□ -0.45
SNCA-205ENST00000394991 ZNF580Q9UK33 172 aa12.27□□□□□ -0.45
SNCA-205ENST00000394991 GMPPBQ9Y5P6 360 aa12.27□□□□□ -0.45
SNCA-205ENST00000394991 OVOL1O14753 267 aa12.26□□□□□ -0.45
SNCA-205ENST00000394991 MT-ND2P03891 347 aa12.26□□□□□ -0.45
SNCA-205ENST00000394991 IGF1P05019 195 aa12.26□□□□□ -0.45
SNCA-205ENST00000394991 F2RL1P55085 397 aa12.26□□□□□ -0.45
SNCA-205ENST00000394991 ZP1P60852 638 aa12.26□□□□□ -0.45
SNCA-205ENST00000394991 ZNF85Q03923 595 aa12.26□□□□□ -0.45
SNCA-205ENST00000394991 TMEM244Q5VVB8 128 aa12.26□□□□□ -0.45
SNCA-205ENST00000394991 OR10A7Q8NGE5 316 aa12.26□□□□□ -0.45
SNCA-205ENST00000394991 OR51A4Q8NGJ6 313 aa12.26□□□□□ -0.45
SNCA-205ENST00000394991 OR2G2Q8NGZ5 317 aa12.26□□□□□ -0.45
SNCA-205ENST00000394991 UBE2E2Q96LR5 201 aa12.26□□□□□ -0.45
SNCA-205ENST00000394991 RASL11BQ9BPW5 248 aa12.26□□□□□ -0.45
SNCA-205ENST00000394991 AASSQ9UDR5 926 aa12.26□□□□□ -0.45
SNCA-205ENST00000394991 GNG8Q9UK08 70 aa12.26□□□□□ -0.45
SNCA-205ENST00000394991 MYRFQ9Y2G1 1151 aa12.26□□□□□ -0.45
SNCA-205ENST00000394991 PLECQ15149 4684 aaKnown RBP12.25□□□□□ -0.45
SNCA-205ENST00000394991 SAP30O75446 220 aa12.25□□□□□ -0.45
SNCA-205ENST00000394991 MOSP00540 346 aa12.25□□□□□ -0.45
SNCA-205ENST00000394991 CD1BP29016 333 aa12.25□□□□□ -0.45
SNCA-205ENST00000394991 PPIFP30405 207 aaKnown RBP12.25□□□□□ -0.45
SNCA-205ENST00000394991 TMED1Q13445 227 aa12.25□□□□□ -0.45
SNCA-205ENST00000394991 CNIH3Q8TBE1 160 aa12.25□□□□□ -0.45
SNCA-205ENST00000394991 RTN4IP1Q8WWV3 396 aaPredicted RBP12.25□□□□□ -0.45
SNCA-205ENST00000394991 ST6GALNAC6Q969X2 333 aa12.25□□□□□ -0.45
SNCA-205ENST00000394991 NR1H4Q96RI1 486 aaPredicted RBP12.25□□□□□ -0.45
SNCA-205ENST00000394991 ZNF581Q9P0T4 197 aa12.25□□□□□ -0.45
SNCA-205ENST00000394991 VSIG4Q9Y279 399 aa12.25□□□□□ -0.45
SNCA-205ENST00000394991 SNTNA6NMZ2 147 aa12.24□□□□□ -0.45
SNCA-205ENST00000394991 OCM2P0CE71 109 aa12.24□□□□□ -0.45
SNCA-205ENST00000394991 OCMP0CE72 109 aaPredicted RBP12.24□□□□□ -0.45
SNCA-205ENST00000394991 TMEM225BP0DP42 221 aa12.24□□□□□ -0.45
SNCA-205ENST00000394991 SOX6P35712 828 aa12.24□□□□□ -0.45
SNCA-205ENST00000394991 MTNR1BP49286 362 aa12.24□□□□□ -0.45
SNCA-205ENST00000394991 VEGFCP49767 419 aa12.24□□□□□ -0.45
SNCA-205ENST00000394991 NANOS3P60323 173 aaKnown RBP12.24□□□□□ -0.45
SNCA-205ENST00000394991 SNRPGP62308 76 aaKnown RBP12.24□□□□□ -0.45
SNCA-205ENST00000394991 PAX5Q02548 391 aa12.24□□□□□ -0.45
SNCA-205ENST00000394991 SRSF7Q16629 238 aaKnown RBP eCLIP12.24□□□□□ -0.45
SNCA-205ENST00000394991 MEDAGQ5VYS4 303 aa12.24□□□□□ -0.45
SNCA-205ENST00000394991 LINC00311Q8N616 119 aa12.24□□□□□ -0.45
SNCA-205ENST00000394991 UBALD1Q8TB05 177 aa12.24□□□□□ -0.45
SNCA-205ENST00000394991 DLX4Q92988 240 aaPredicted RBP12.24□□□□□ -0.45
SNCA-205ENST00000394991 BARHL1Q9BZE3 327 aa12.24□□□□□ -0.45
SNCA-205ENST00000394991 ALX4Q9H161 411 aaPredicted RBP12.24□□□□□ -0.45
SNCA-205ENST00000394991 FRRS1LQ9P0K9 344 aa12.24□□□□□ -0.45
SNCA-205ENST00000394991 ALMS1Q8TCU4 4167 aa12.23□□□□□ -0.45
SNCA-205ENST00000394991 LOC100130705A0A1B0GUX0 176 aa12.23□□□□□ -0.45
SNCA-205ENST00000394991 ANKRD65E5RJM6 399 aa12.23□□□□□ -0.45
SNCA-205ENST00000394991 G3V318 75 aa12.23□□□□□ -0.45
SNCA-205ENST00000394991 LDLRAD4O15165 306 aa12.23□□□□□ -0.45
SNCA-205ENST00000394991 ISG15P05161 165 aa12.23□□□□□ -0.45
SNCA-205ENST00000394991 OR5H8P0DN80 308 aa12.23□□□□□ -0.45
SNCA-205ENST00000394991 SLURP1P55000 103 aa12.23□□□□□ -0.45
SNCA-205ENST00000394991 GABPB1Q06547 395 aaPredicted RBP12.23□□□□□ -0.45
SNCA-205ENST00000394991 ZSCAN26Q16670 478 aa12.23□□□□□ -0.45
SNCA-205ENST00000394991 LRRC36Q1X8D7 754 aa12.23□□□□□ -0.45
SNCA-205ENST00000394991 FAM220AQ7Z4H9 259 aa12.23□□□□□ -0.45
SNCA-205ENST00000394991 OR8H1Q8NGG4 311 aa12.23□□□□□ -0.45
SNCA-205ENST00000394991 FAM118AQ9NWS6 357 aa12.23□□□□□ -0.45
SNCA-205ENST00000394991 ZNF107Q9UII5 783 aaPredicted RBP12.23□□□□□ -0.45
SNCA-205ENST00000394991 WSB1Q9Y6I7 421 aa12.23□□□□□ -0.45
SNCA-205ENST00000394991 DAPL1A0PJW8 107 aa12.22□□□□□ -0.45
SNCA-205ENST00000394991 MAGEA13PA6NCF6 341 aa12.22□□□□□ -0.45
SNCA-205ENST00000394991 C15orf65H3BRN8 121 aa12.22□□□□□ -0.45
SNCA-205ENST00000394991 SLC31A2O15432 143 aa12.22□□□□□ -0.45
SNCA-205ENST00000394991 IGLV1-40P01703 118 aa12.22□□□□□ -0.45
SNCA-205ENST00000394991 IGHV4-30-4P0DP06 118 aa12.22□□□□□ -0.45
SNCA-205ENST00000394991 SLC2A2P11168 524 aaPredicted RBP12.22□□□□□ -0.45
SNCA-205ENST00000394991 DBTP11182 482 aaKnown RBP12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms