RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 UCP1P25874 307 aa15.71■□□□□ 0.11
PCDHA1-202ENST00000394633 RPS18P62269 152 aaKnown RBP15.71■□□□□ 0.11
PCDHA1-202ENST00000394633 ICAM4Q14773 271 aa15.71■□□□□ 0.11
PCDHA1-202ENST00000394633 NCMAPQ5T1S8 102 aa15.71■□□□□ 0.11
PCDHA1-202ENST00000394633 OR56B2PQ8NGI1 322 aa15.71■□□□□ 0.11
PCDHA1-202ENST00000394633 ABHD3Q8WU67 409 aa15.71■□□□□ 0.11
PCDHA1-202ENST00000394633 SGCZQ96LD1 299 aa15.71■□□□□ 0.11
PCDHA1-202ENST00000394633 PRDM14Q9GZV8 571 aa15.71■□□□□ 0.11
PCDHA1-202ENST00000394633 MIOXQ9UGB7 285 aa15.71■□□□□ 0.11
PCDHA1-202ENST00000394633 LRRC3CA6NJW4 275 aa15.71■□□□□ 0.1
PCDHA1-202ENST00000394633 SRSF7Q16629 238 aaKnown RBP eCLIP15.71■□□□□ 0.1
PCDHA1-202ENST00000394633 COLCA1Q6ZS62 124 aa15.71■□□□□ 0.1
PCDHA1-202ENST00000394633 TMEM217Q8N7C4 229 aa15.71■□□□□ 0.1
PCDHA1-202ENST00000394633 CCL28Q9NRJ3 127 aa15.71■□□□□ 0.1
PCDHA1-202ENST00000394633 IL36RNQ9UBH0 155 aa15.71■□□□□ 0.1
PCDHA1-202ENST00000394633 DUXBA0A1W2PPF3 345 aa15.7■□□□□ 0.1
PCDHA1-202ENST00000394633 H0YL77 283 aa15.7■□□□□ 0.1
PCDHA1-202ENST00000394633 TUSC2O75896 110 aa15.7■□□□□ 0.1
PCDHA1-202ENST00000394633 IGHV3-9P01782 118 aa15.7■□□□□ 0.1
PCDHA1-202ENST00000394633 FBP1P09467 338 aa15.7■□□□□ 0.1
PCDHA1-202ENST00000394633 CEBPGP53567 150 aa15.7■□□□□ 0.1
PCDHA1-202ENST00000394633 FOXO1Q12778 655 aa15.7■□□□□ 0.1
PCDHA1-202ENST00000394633 IL22RA1Q8N6P7 574 aa15.7■□□□□ 0.1
PCDHA1-202ENST00000394633 ZNF845Q96IR2 970 aaPredicted RBP15.7■□□□□ 0.1
PCDHA1-202ENST00000394633 UNKLQ9H9P5 680 aaKnown RBP15.7■□□□□ 0.1
PCDHA1-202ENST00000394633 TNRC6AQ8NDV7 1962 aaKnown RBP15.7■□□□□ 0.1
PCDHA1-202ENST00000394633 SPTBN2O15020 2390 aa15.7■□□□□ 0.1
PCDHA1-202ENST00000394633 IGKV1-6A0A0C4DH72 117 aa15.7■□□□□ 0.1
PCDHA1-202ENST00000394633 TRAPPC6AO75865 159 aa15.7■□□□□ 0.1
PCDHA1-202ENST00000394633 SCAF4O95104 1147 aaKnown RBP15.7■□□□□ 0.1
PCDHA1-202ENST00000394633 SLC34A2O95436 690 aa15.7■□□□□ 0.1
PCDHA1-202ENST00000394633 VDAC1P21796 283 aa15.7■□□□□ 0.1
PCDHA1-202ENST00000394633 RPS10P46783 165 aaKnown RBP15.7■□□□□ 0.1
PCDHA1-202ENST00000394633 FGF12P61328 243 aa15.7■□□□□ 0.1
PCDHA1-202ENST00000394633 ZNF154Q13106 437 aa15.7■□□□□ 0.1
PCDHA1-202ENST00000394633 PRDX4Q13162 271 aa15.7■□□□□ 0.1
PCDHA1-202ENST00000394633 CPNE4Q96A23 557 aaPredicted RBP15.7■□□□□ 0.1
PCDHA1-202ENST00000394633 GNPNAT1Q96EK6 184 aaPredicted RBP15.7■□□□□ 0.1
PCDHA1-202ENST00000394633 MMP24Q9Y5R2 645 aa15.7■□□□□ 0.1
PCDHA1-202ENST00000394633 HSPB6O14558 160 aa15.69■□□□□ 0.1
PCDHA1-202ENST00000394633 CHST1O43916 411 aa15.69■□□□□ 0.1
PCDHA1-202ENST00000394633 CYTIPO60759 359 aa15.69■□□□□ 0.1
PCDHA1-202ENST00000394633 MMP9P14780 707 aa15.69■□□□□ 0.1
PCDHA1-202ENST00000394633 TAGLN2P37802 199 aaKnown RBP15.69■□□□□ 0.1
PCDHA1-202ENST00000394633 FOLR3P41439 243 aa15.69■□□□□ 0.1
PCDHA1-202ENST00000394633 HAAOP46952 286 aa15.69■□□□□ 0.1
PCDHA1-202ENST00000394633 PAX9P55771 341 aa15.69■□□□□ 0.1
PCDHA1-202ENST00000394633 BAXQ07812 192 aa15.69■□□□□ 0.1
PCDHA1-202ENST00000394633 ZNF506Q5JVG8 444 aa15.69■□□□□ 0.1
PCDHA1-202ENST00000394633 ACER2Q5QJU3 275 aa15.69■□□□□ 0.1
PCDHA1-202ENST00000394633 SPRY4Q9C004 299 aa15.69■□□□□ 0.1
PCDHA1-202ENST00000394633 FREM1Q5H8C1 2179 aa15.69■□□□□ 0.1
PCDHA1-202ENST00000394633 CEACAM1P13688 526 aa15.68■□□□□ 0.1
PCDHA1-202ENST00000394633 GPM6AP51674 278 aa15.68■□□□□ 0.1
PCDHA1-202ENST00000394633 UBE2KP61086 200 aa15.68■□□□□ 0.1
PCDHA1-202ENST00000394633 Q0VFX4 171 aa15.68■□□□□ 0.1
PCDHA1-202ENST00000394633 KIAA0141Q14154 515 aaPredicted RBP15.68■□□□□ 0.1
PCDHA1-202ENST00000394633 CYB561D1Q8N8Q1 229 aa15.68■□□□□ 0.1
PCDHA1-202ENST00000394633 DDA1Q9BW61 102 aa15.68■□□□□ 0.1
PCDHA1-202ENST00000394633 TMPRSS5Q9H3S3 457 aa15.68■□□□□ 0.1
PCDHA1-202ENST00000394633 DEPPQ9NTK1 212 aa15.68■□□□□ 0.1
PCDHA1-202ENST00000394633 TAAR3PQ9P1P4 343 aa15.68■□□□□ 0.1
PCDHA1-202ENST00000394633 FTH1P19P0C7X4 201 aa15.68■□□□□ 0.1
PCDHA1-202ENST00000394633 S100PP25815 95 aa15.68■□□□□ 0.1
PCDHA1-202ENST00000394633 DLK1P80370 383 aa15.68■□□□□ 0.1
PCDHA1-202ENST00000394633 AKR1C8PQ5T2L2 129 aa15.68■□□□□ 0.1
PCDHA1-202ENST00000394633 ZNF343Q6P1L6 599 aa15.68■□□□□ 0.1
PCDHA1-202ENST00000394633 ZNF429Q86V71 674 aa15.68■□□□□ 0.1
PCDHA1-202ENST00000394633 OR5D13Q8NGL4 314 aa15.68■□□□□ 0.1
PCDHA1-202ENST00000394633 REPIN1Q9BWE0 567 aaKnown RBP15.68■□□□□ 0.1
PCDHA1-202ENST00000394633 MTCH1Q9NZJ7 389 aa15.68■□□□□ 0.1
PCDHA1-202ENST00000394633 RNF115Q9Y4L5 304 aa15.68■□□□□ 0.1
PCDHA1-202ENST00000394633 PCSK5Q92824 1860 aa15.68■□□□□ 0.1
PCDHA1-202ENST00000394633 A0A087WWC5 75 aa15.67■□□□□ 0.1
PCDHA1-202ENST00000394633 TRAV20A0A0B4J274 112 aa15.67■□□□□ 0.1
PCDHA1-202ENST00000394633 TNFSF12O43508 249 aa15.67■□□□□ 0.1
PCDHA1-202ENST00000394633 HSPB1P04792 205 aaKnown RBP15.67■□□□□ 0.1
PCDHA1-202ENST00000394633 FAM209BQ5JX69 171 aa15.67■□□□□ 0.1
PCDHA1-202ENST00000394633 SAXO1Q8IYX7 474 aa15.67■□□□□ 0.1
PCDHA1-202ENST00000394633 CLDND2Q8NHS1 167 aa15.67■□□□□ 0.1
PCDHA1-202ENST00000394633 Q8WTZ3 238 aa15.67■□□□□ 0.1
PCDHA1-202ENST00000394633 CT55Q8WUE5 264 aa15.67■□□□□ 0.1
PCDHA1-202ENST00000394633 EDARADDQ8WWZ3 215 aa15.67■□□□□ 0.1
PCDHA1-202ENST00000394633 A0A0G2JRQ6 117 aa15.67■□□□□ 0.1
PCDHA1-202ENST00000394633 PINLYPA6NC86 204 aa15.67■□□□□ 0.1
PCDHA1-202ENST00000394633 H0Y980 276 aa15.67■□□□□ 0.1
PCDHA1-202ENST00000394633 YIF1AO95070 293 aa15.67■□□□□ 0.1
PCDHA1-202ENST00000394633 CXCL1P09341 107 aa15.67■□□□□ 0.1
PCDHA1-202ENST00000394633 CCL2P13500 99 aa15.67■□□□□ 0.1
PCDHA1-202ENST00000394633 HOXA5P20719 270 aa15.67■□□□□ 0.1
PCDHA1-202ENST00000394633 CCNOP22674 350 aa15.67■□□□□ 0.1
PCDHA1-202ENST00000394633 ELOBQ15370 118 aa15.67■□□□□ 0.1
PCDHA1-202ENST00000394633 C6orf15Q6UXA7 325 aaPredicted RBP15.67■□□□□ 0.1
PCDHA1-202ENST00000394633 NEK7Q8TDX7 302 aa15.67■□□□□ 0.1
PCDHA1-202ENST00000394633 ATP5SQ99766 215 aa15.67■□□□□ 0.1
PCDHA1-202ENST00000394633 TCFL5Q9UL49 500 aa15.67■□□□□ 0.1
PCDHA1-202ENST00000394633 ATP23Q9Y6H3 246 aa15.67■□□□□ 0.1
PCDHA1-202ENST00000394633 WSB1Q9Y6I7 421 aa15.67■□□□□ 0.1
PCDHA1-202ENST00000394633 AKAP13Q12802 2813 aa15.67■□□□□ 0.1
PCDHA1-202ENST00000394633 KIR2DS1A0A191URI9 304 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms