RNA–Protein interactions for RNA: ENST00000394299.6

GPC3-202, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-202ENST00000394299 ZNF146Q15072 292 aa12.72□□□□□ -0.37
GPC3-202ENST00000394299 ZNF497Q6ZNH5 498 aa12.72□□□□□ -0.37
GPC3-202ENST00000394299 CCDC71LQ8N9Z2 235 aa12.72□□□□□ -0.37
GPC3-202ENST00000394299 OR10J5Q8NHC4 309 aa12.72□□□□□ -0.37
GPC3-202ENST00000394299 TMED6Q8WW62 240 aa12.72□□□□□ -0.37
GPC3-202ENST00000394299 BCL2L14Q9BZR8 327 aa12.72□□□□□ -0.37
GPC3-202ENST00000394299 RIMS4Q9H426 269 aaPredicted RBP12.72□□□□□ -0.37
GPC3-202ENST00000394299 IFT22Q9H7X7 185 aa12.72□□□□□ -0.37
GPC3-202ENST00000394299 ZC4H2Q9NQZ6 224 aa12.72□□□□□ -0.37
GPC3-202ENST00000394299 UBE2J1Q9Y385 318 aaPredicted RBP12.72□□□□□ -0.37
GPC3-202ENST00000394299 GPR31O00270 319 aa12.71□□□□□ -0.37
GPC3-202ENST00000394299 SH2D1BO14796 132 aa12.71□□□□□ -0.37
GPC3-202ENST00000394299 SIGLEC5O15389 551 aa12.71□□□□□ -0.37
GPC3-202ENST00000394299 NUP62P37198 522 aaPredicted RBP12.71□□□□□ -0.37
GPC3-202ENST00000394299 RPL7L1Q6DKI1 246 aaKnown RBP12.71□□□□□ -0.37
GPC3-202ENST00000394299 WDR82Q6UXN9 313 aa12.71□□□□□ -0.37
GPC3-202ENST00000394299 TPRX1Q8N7U7 411 aa12.71□□□□□ -0.37
GPC3-202ENST00000394299 LRTM2Q8N967 370 aa12.71□□□□□ -0.37
GPC3-202ENST00000394299 LILRB1Q8NHL6 650 aaPredicted RBP12.71□□□□□ -0.37
GPC3-202ENST00000394299 TMEM222Q9H0R3 208 aa12.71□□□□□ -0.37
GPC3-202ENST00000394299 SLC25A32Q9H2D1 315 aa12.71□□□□□ -0.37
GPC3-202ENST00000394299 CXXC4Q9H2H0 198 aa12.71□□□□□ -0.37
GPC3-202ENST00000394299 KALRNO60229 2985 aa12.71□□□□□ -0.37
GPC3-202ENST00000394299 TRBV6-6A0A0A6YYG2 114 aa12.71□□□□□ -0.38
GPC3-202ENST00000394299 K7EPK0 472 aa12.71□□□□□ -0.38
GPC3-202ENST00000394299 NXPH3O95157 252 aa12.71□□□□□ -0.38
GPC3-202ENST00000394299 PTBP3O95758 552 aaKnown RBP12.71□□□□□ -0.38
GPC3-202ENST00000394299 KITLGP21583 273 aa12.71□□□□□ -0.38
GPC3-202ENST00000394299 RPL12P30050 165 aaKnown RBP12.71□□□□□ -0.38
GPC3-202ENST00000394299 FAM180AQ6UWF9 173 aa12.71□□□□□ -0.38
GPC3-202ENST00000394299 BAP18Q8IXM2 172 aa12.71□□□□□ -0.38
GPC3-202ENST00000394299 Q8IYB0 196 aa12.71□□□□□ -0.38
GPC3-202ENST00000394299 FAM71E2Q8N5Q1 922 aa12.71□□□□□ -0.38
GPC3-202ENST00000394299 Q8NA96 180 aa12.71□□□□□ -0.38
GPC3-202ENST00000394299 OR2Z1Q8NG97 314 aa12.71□□□□□ -0.38
GPC3-202ENST00000394299 SHARPINQ9H0F6 387 aa12.71□□□□□ -0.38
GPC3-202ENST00000394299 ESRP2Q9H6T0 727 aaKnown RBP12.71□□□□□ -0.38
GPC3-202ENST00000394299 BARX1Q9HBU1 254 aaPredicted RBP12.71□□□□□ -0.38
GPC3-202ENST00000394299 PFDN2Q9UHV9 154 aa12.71□□□□□ -0.38
GPC3-202ENST00000394299 ZZEF1O43149 2961 aa12.7□□□□□ -0.38
GPC3-202ENST00000394299 TMEM210A6NLX4 147 aa12.7□□□□□ -0.38
GPC3-202ENST00000394299 PGLYRP1O75594 196 aaPredicted RBP12.7□□□□□ -0.38
GPC3-202ENST00000394299 AESQ08117 197 aa12.7□□□□□ -0.38
GPC3-202ENST00000394299 PRR30Q53SZ7 412 aaPredicted RBP12.7□□□□□ -0.38
GPC3-202ENST00000394299 H1FOOQ8IZA3 346 aaPredicted RBP12.7□□□□□ -0.38
GPC3-202ENST00000394299 OR4A4PQ8NGN8 299 aa12.7□□□□□ -0.38
GPC3-202ENST00000394299 FAM57AQ8TBR7 257 aa12.7□□□□□ -0.38
GPC3-202ENST00000394299 ERGIC1Q969X5 290 aa12.7□□□□□ -0.38
GPC3-202ENST00000394299 HES4Q9HCC6 221 aa12.7□□□□□ -0.38
GPC3-202ENST00000394299 ZDHHC8Q9ULC8 765 aa12.7□□□□□ -0.38
GPC3-202ENST00000394299 PCDHB10Q9UN67 800 aa12.7□□□□□ -0.38
GPC3-202ENST00000394299 OR2W1Q9Y3N9 320 aa12.7□□□□□ -0.38
GPC3-202ENST00000394299 CHD3Q12873 2000 aaKnown RBP12.7□□□□□ -0.38
GPC3-202ENST00000394299 CTXN2P0C2S0 81 aa12.7□□□□□ -0.38
GPC3-202ENST00000394299 TIMP3P35625 211 aa12.7□□□□□ -0.38
GPC3-202ENST00000394299 DOLPP1Q86YN1 238 aa12.7□□□□□ -0.38
GPC3-202ENST00000394299 SELENOHQ8IZQ5 122 aaKnown RBP12.7□□□□□ -0.38
GPC3-202ENST00000394299 STPG2Q8N412 459 aa12.7□□□□□ -0.38
GPC3-202ENST00000394299 OR51H1Q8NH63 302 aa12.7□□□□□ -0.38
GPC3-202ENST00000394299 TAF9BQ9HBM6 251 aa12.7□□□□□ -0.38
GPC3-202ENST00000394299 COQ3Q9NZJ6 369 aa12.7□□□□□ -0.38
GPC3-202ENST00000394299 AMDHD2Q9Y303 409 aa12.7□□□□□ -0.38
GPC3-202ENST00000394299 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.69□□□□□ -0.38
GPC3-202ENST00000394299 GLAP06280 429 aa12.69□□□□□ -0.38
GPC3-202ENST00000394299 PET100P0DJ07 73 aa12.69□□□□□ -0.38
GPC3-202ENST00000394299 TESK1Q15569 626 aa12.69□□□□□ -0.38
GPC3-202ENST00000394299 MBNL2Q5VZF2 373 aaKnown RBP12.69□□□□□ -0.38
GPC3-202ENST00000394299 ACP7Q6ZNF0 438 aa12.69□□□□□ -0.38
GPC3-202ENST00000394299 ZNF695Q8IW36 515 aa12.69□□□□□ -0.38
GPC3-202ENST00000394299 NARFLQ9H6Q4 476 aa12.69□□□□□ -0.38
GPC3-202ENST00000394299 DNAJB11Q9UBS4 358 aa12.69□□□□□ -0.38
GPC3-202ENST00000394299 HSPA12AO43301 675 aa12.69□□□□□ -0.38
GPC3-202ENST00000394299 IGLV2-14P01704 120 aa12.69□□□□□ -0.38
GPC3-202ENST00000394299 TPT1P13693 172 aaKnown RBP12.69□□□□□ -0.38
GPC3-202ENST00000394299 CEACAM8P31997 349 aaPredicted RBP12.69□□□□□ -0.38
GPC3-202ENST00000394299 ASCL1P50553 236 aa12.69□□□□□ -0.38
GPC3-202ENST00000394299 TMEM33P57088 247 aa12.69□□□□□ -0.38
GPC3-202ENST00000394299 IZUMO4Q1ZYL8 232 aa12.69□□□□□ -0.38
GPC3-202ENST00000394299 TUSC1Q2TAM9 212 aa12.69□□□□□ -0.38
GPC3-202ENST00000394299 KRTCAP3Q53RY4 240 aa12.69□□□□□ -0.38
GPC3-202ENST00000394299 TIMM23BQ5SRD1 257 aa12.69□□□□□ -0.38
GPC3-202ENST00000394299 CCDC28AQ8IWP9 274 aa12.69□□□□□ -0.38
GPC3-202ENST00000394299 STOML3Q8TAV4 291 aa12.69□□□□□ -0.38
GPC3-202ENST00000394299 FBXO9Q9UK97 447 aaPredicted RBP12.69□□□□□ -0.38
GPC3-202ENST00000394299 PPP1R3CQ9UQK1 317 aa12.69□□□□□ -0.38
GPC3-202ENST00000394299 ROS1P08922 2347 aa12.68□□□□□ -0.38
GPC3-202ENST00000394299 EGR1P18146 543 aa12.68□□□□□ -0.38
GPC3-202ENST00000394299 SMCO1Q147U7 214 aa12.68□□□□□ -0.38
GPC3-202ENST00000394299 TBR1Q16650 682 aa12.68□□□□□ -0.38
GPC3-202ENST00000394299 OR1S2Q8NGQ3 325 aa12.68□□□□□ -0.38
GPC3-202ENST00000394299 OR1L1Q8NH94 360 aa12.68□□□□□ -0.38
GPC3-202ENST00000394299 CABLES2Q9BTV7 478 aa12.68□□□□□ -0.38
GPC3-202ENST00000394299 MAGT1Q9H0U3 335 aa12.68□□□□□ -0.38
GPC3-202ENST00000394299 RHOFQ9HBH0 211 aa12.68□□□□□ -0.38
GPC3-202ENST00000394299 MED9Q9NWA0 146 aa12.68□□□□□ -0.38
GPC3-202ENST00000394299 TAAR3PQ9P1P4 343 aa12.68□□□□□ -0.38
GPC3-202ENST00000394299 FBXL17Q9UF56 701 aa12.68□□□□□ -0.38
GPC3-202ENST00000394299 PTPRQQ9UMZ3 2332 aa12.68□□□□□ -0.38
GPC3-202ENST00000394299 ATP6V1G2-DDX39BF2Z307 99 aa12.67□□□□□ -0.38
GPC3-202ENST00000394299 ADAM20O43506 726 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms