RNA–Protein interactions for RNA: ENST00000394092.6

SMAD1-202, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,658 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-202ENST00000394092 HRH4Q9H3N8 390 aa6.12□□□□□ -1.43
SMAD1-202ENST00000394092 LIN7CQ9NUP9 197 aaKnown RBP6.12□□□□□ -1.43
SMAD1-202ENST00000394092 WDFY4Q6ZS81 3184 aa6.11□□□□□ -1.43
SMAD1-202ENST00000394092 LOC105371267A0A1B0GV96 52 aa6.11□□□□□ -1.43
SMAD1-202ENST00000394092 NKX2-6A6NCS4 301 aa6.11□□□□□ -1.43
SMAD1-202ENST00000394092 RNF212BA8MTL3 300 aa6.11□□□□□ -1.43
SMAD1-202ENST00000394092 AHRRA9YTQ3 701 aa6.11□□□□□ -1.43
SMAD1-202ENST00000394092 TRIM77I1YAP6 450 aa6.11□□□□□ -1.43
SMAD1-202ENST00000394092 ABCD4O14678 606 aa6.11□□□□□ -1.43
SMAD1-202ENST00000394092 HSD17B6O14756 317 aa6.11□□□□□ -1.43
SMAD1-202ENST00000394092 HSPA12AO43301 675 aa6.11□□□□□ -1.43
SMAD1-202ENST00000394092 ADAM20O43506 726 aa6.11□□□□□ -1.43
SMAD1-202ENST00000394092 LILRA1O75019 489 aa6.11□□□□□ -1.43
SMAD1-202ENST00000394092 PITX3O75364 302 aa6.11□□□□□ -1.43
SMAD1-202ENST00000394092 FBXO24O75426 580 aa6.11□□□□□ -1.43
SMAD1-202ENST00000394092 RHBDL1O75783 438 aa6.11□□□□□ -1.43
SMAD1-202ENST00000394092 IGKV3-15P01624 115 aa6.11□□□□□ -1.43
SMAD1-202ENST00000394092 SERPINE2P07093 398 aa6.11□□□□□ -1.43
SMAD1-202ENST00000394092 CELA3BP08861 270 aa6.11□□□□□ -1.43
SMAD1-202ENST00000394092 ATF4P18848 351 aaPredicted RBP6.11□□□□□ -1.43
SMAD1-202ENST00000394092 F2RP25116 425 aa6.11□□□□□ -1.43
SMAD1-202ENST00000394092 LPAR6P43657 344 aa6.11□□□□□ -1.43
SMAD1-202ENST00000394092 ERVK11-1P61568 191 aa6.11□□□□□ -1.43
SMAD1-202ENST00000394092 EWSR1Q01844 656 aaKnown RBP eCLIP6.11□□□□□ -1.43
SMAD1-202ENST00000394092 ZNF146Q15072 292 aa6.11□□□□□ -1.43
SMAD1-202ENST00000394092 HMGN3Q15651 99 aa6.11□□□□□ -1.43
SMAD1-202ENST00000394092 MST1LQ2TV78 715 aa6.11□□□□□ -1.43
SMAD1-202ENST00000394092 EIF2S3LQ2VIR3 472 aaKnown RBP6.11□□□□□ -1.43
SMAD1-202ENST00000394092 NMSQ5H8A3 153 aa6.11□□□□□ -1.43
SMAD1-202ENST00000394092 C10orf91Q5T1B1 145 aa6.11□□□□□ -1.43
SMAD1-202ENST00000394092 Q6P435 159 aa6.11□□□□□ -1.43
SMAD1-202ENST00000394092 PCSK4Q6UW60 755 aa6.11□□□□□ -1.43
SMAD1-202ENST00000394092 ZNF497Q6ZNH5 498 aa6.11□□□□□ -1.43
SMAD1-202ENST00000394092 BOLLQ8N9W6 283 aaKnown RBP6.11□□□□□ -1.43
SMAD1-202ENST00000394092 LFNGQ8NES3 379 aa6.11□□□□□ -1.43
SMAD1-202ENST00000394092 LILRB1Q8NHL6 650 aaPredicted RBP6.11□□□□□ -1.43
SMAD1-202ENST00000394092 RNASE11Q8TAA1 199 aaKnown RBP6.11□□□□□ -1.43
SMAD1-202ENST00000394092 ERGIC1Q969X5 290 aa6.11□□□□□ -1.43
SMAD1-202ENST00000394092 ZNF488Q96MN9 340 aa6.11□□□□□ -1.43
SMAD1-202ENST00000394092 USB1Q9BQ65 265 aaKnown RBP6.11□□□□□ -1.43
SMAD1-202ENST00000394092 NRIP2Q9BQI9 281 aa6.11□□□□□ -1.43
SMAD1-202ENST00000394092 MS4A7Q9GZW8 240 aaPredicted RBP6.11□□□□□ -1.43
SMAD1-202ENST00000394092 PLEKHF2Q9H8W4 249 aa6.11□□□□□ -1.43
SMAD1-202ENST00000394092 PARD6AQ9NPB6 346 aa6.11□□□□□ -1.43
SMAD1-202ENST00000394092 CCL28Q9NRJ3 127 aa6.11□□□□□ -1.43
SMAD1-202ENST00000394092 LYRM2Q9NU23 88 aaPredicted RBP6.11□□□□□ -1.43
SMAD1-202ENST00000394092 UQCC1Q9NVA1 299 aa6.11□□□□□ -1.43
SMAD1-202ENST00000394092 TAAR3PQ9P1P4 343 aa6.11□□□□□ -1.43
SMAD1-202ENST00000394092 TRAPPC2LQ9UL33 140 aa6.11□□□□□ -1.43
SMAD1-202ENST00000394092 FREM2Q5SZK8 3169 aa6.11□□□□□ -1.43
SMAD1-202ENST00000394092 ZNF318Q5VUA4 2279 aa6.11□□□□□ -1.43
SMAD1-202ENST00000394092 CACNA1HO95180 2353 aa6.11□□□□□ -1.43
SMAD1-202ENST00000394092 IGKV1D-13A0A0B4J2D9 117 aa6.1□□□□□ -1.43
SMAD1-202ENST00000394092 IGKV1-6A0A0C4DH72 117 aa6.1□□□□□ -1.43
SMAD1-202ENST00000394092 UMAD1C9J7I0 102 aa6.1□□□□□ -1.43
SMAD1-202ENST00000394092 SIRPB1O00241 398 aa6.1□□□□□ -1.43
SMAD1-202ENST00000394092 SLC33A1O00400 549 aaPredicted RBP6.1□□□□□ -1.43
SMAD1-202ENST00000394092 ZNHIT1O43257 154 aa6.1□□□□□ -1.43
SMAD1-202ENST00000394092 PGLYRP1O75594 196 aaPredicted RBP6.1□□□□□ -1.43
SMAD1-202ENST00000394092 CEACAM4O75871 244 aa6.1□□□□□ -1.43
SMAD1-202ENST00000394092 TSPAN15O95858 294 aa6.1□□□□□ -1.43
SMAD1-202ENST00000394092 OR2H2O95918 312 aa6.1□□□□□ -1.43
SMAD1-202ENST00000394092 IGKV1-13P0DP09 117 aa6.1□□□□□ -1.43
SMAD1-202ENST00000394092 GLI4P10075 376 aa6.1□□□□□ -1.43
SMAD1-202ENST00000394092 SPP1P10451 314 aa6.1□□□□□ -1.43
SMAD1-202ENST00000394092 CD200P41217 278 aa6.1□□□□□ -1.43
SMAD1-202ENST00000394092 CAMLGP49069 296 aa6.1□□□□□ -1.43
SMAD1-202ENST00000394092 DVL1P1P54792 670 aaPredicted RBP6.1□□□□□ -1.43
SMAD1-202ENST00000394092 ZNF154Q13106 437 aa6.1□□□□□ -1.43
SMAD1-202ENST00000394092 ACSF3Q4G176 576 aaPredicted RBP6.1□□□□□ -1.43
SMAD1-202ENST00000394092 ZNF324BQ6AW86 544 aaPredicted RBP6.1□□□□□ -1.43
SMAD1-202ENST00000394092 BTNL8Q6UX41 500 aa6.1□□□□□ -1.43
SMAD1-202ENST00000394092 ZADH2Q8N4Q0 377 aa6.1□□□□□ -1.43
SMAD1-202ENST00000394092 DMBX1Q8NFW5 382 aa6.1□□□□□ -1.43
SMAD1-202ENST00000394092 OR8G5Q8NG78 346 aa6.1□□□□□ -1.43
SMAD1-202ENST00000394092 LYPD6BQ8NI32 183 aa6.1□□□□□ -1.43
SMAD1-202ENST00000394092 LSM10Q969L4 123 aaKnown RBP6.1□□□□□ -1.43
SMAD1-202ENST00000394092 CXXC4Q9H2H0 198 aa6.1□□□□□ -1.43
SMAD1-202ENST00000394092 MBNL3Q9NUK0 354 aaKnown RBP6.1□□□□□ -1.43
SMAD1-202ENST00000394092 KCNIP1Q9NZI2 227 aa6.1□□□□□ -1.43
SMAD1-202ENST00000394092 PROCRQ9UNN8 238 aa6.1□□□□□ -1.43
SMAD1-202ENST00000394092 RBM7Q9Y580 266 aaKnown RBP6.1□□□□□ -1.43
SMAD1-202ENST00000394092 OTOGLQ3ZCN5 2332 aa6.1□□□□□ -1.43
SMAD1-202ENST00000394092 A0A1B0GU03 582 aa6.1□□□□□ -1.43
SMAD1-202ENST00000394092 TMEM30CPA0ZSE6 113 aa6.1□□□□□ -1.43
SMAD1-202ENST00000394092 FAM181BA6NEQ2 426 aa6.1□□□□□ -1.43
SMAD1-202ENST00000394092 DNASE2O00115 360 aaPredicted RBP6.1□□□□□ -1.43
SMAD1-202ENST00000394092 CDIPTO14735 213 aa6.1□□□□□ -1.43
SMAD1-202ENST00000394092 TIMM8AO60220 97 aaPredicted RBP6.1□□□□□ -1.43
SMAD1-202ENST00000394092 SSSCA1O60232 199 aa6.1□□□□□ -1.43
SMAD1-202ENST00000394092 HAND1O96004 215 aa6.1□□□□□ -1.43
SMAD1-202ENST00000394092 PRH1P02810 166 aa6.1□□□□□ -1.43
SMAD1-202ENST00000394092 DANCRP0C864 163 aa6.1□□□□□ -1.43
SMAD1-202ENST00000394092 KITLGP21583 273 aa6.1□□□□□ -1.43
SMAD1-202ENST00000394092 GCH1P30793 250 aa6.1□□□□□ -1.43
SMAD1-202ENST00000394092 KIR2DL2P43627 348 aaPredicted RBP6.1□□□□□ -1.43
SMAD1-202ENST00000394092 AKR1C2P52895 323 aa6.1□□□□□ -1.43
SMAD1-202ENST00000394092 RPL23AP62750 156 aaKnown RBP6.1□□□□□ -1.43
SMAD1-202ENST00000394092 AKR1C1Q04828 323 aa6.1□□□□□ -1.43
SMAD1-202ENST00000394092 PSG7Q13046 419 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 100.4 ms