RNA–Protein interactions for RNA: ENST00000393943.9

GABRA1-202, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRA1, Length 4,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-202ENST00000393943 HIST1H2BHQ93079 126 aa7.5□□□□□ -1.21
GABRA1-202ENST00000393943 C18orf12Q96KH6 178 aa7.5□□□□□ -1.21
GABRA1-202ENST00000393943 HIST1H2BNQ99877 126 aa7.5□□□□□ -1.21
GABRA1-202ENST00000393943 HIST1H2BMQ99879 126 aa7.5□□□□□ -1.21
GABRA1-202ENST00000393943 ERRFI1Q9UJM3 462 aaPredicted RBP7.5□□□□□ -1.21
GABRA1-202ENST00000393943 BCAT2O15382 392 aaPredicted RBP7.49□□□□□ -1.21
GABRA1-202ENST00000393943 CEACAM1P13688 526 aa7.49□□□□□ -1.21
GABRA1-202ENST00000393943 COL9A1P20849 921 aa7.49□□□□□ -1.21
GABRA1-202ENST00000393943 ERVFC1-1P60608 527 aa7.49□□□□□ -1.21
GABRA1-202ENST00000393943 RAC3P60763 192 aa7.49□□□□□ -1.21
GABRA1-202ENST00000393943 SMAD4Q13485 552 aaKnown RBP7.49□□□□□ -1.21
GABRA1-202ENST00000393943 TBC1D28Q2M2D7 210 aa7.49□□□□□ -1.21
GABRA1-202ENST00000393943 RPEL1Q2QD12 228 aa7.49□□□□□ -1.21
GABRA1-202ENST00000393943 SFTPA1Q8IWL2 248 aa7.49□□□□□ -1.21
GABRA1-202ENST00000393943 AGBL5Q8NDL9 886 aa7.49□□□□□ -1.21
GABRA1-202ENST00000393943 TRBV9A0A0B4J1U6 114 aa7.49□□□□□ -1.21
GABRA1-202ENST00000393943 MED19A0JLT2 244 aaPredicted RBP7.49□□□□□ -1.21
GABRA1-202ENST00000393943 OTOL1A6NHN0 477 aaPredicted RBP7.49□□□□□ -1.21
GABRA1-202ENST00000393943 CRYABP02511 175 aaKnown RBP7.49□□□□□ -1.21
GABRA1-202ENST00000393943 ACSF3Q4G176 576 aaPredicted RBP7.49□□□□□ -1.21
GABRA1-202ENST00000393943 PRAMEF5Q5TYX0 476 aa7.49□□□□□ -1.21
GABRA1-202ENST00000393943 PRAMEF6Q5VXH4 476 aa7.49□□□□□ -1.21
GABRA1-202ENST00000393943 S100A7AQ86SG5 101 aa7.49□□□□□ -1.21
GABRA1-202ENST00000393943 OR52M1Q8NGK5 317 aa7.49□□□□□ -1.21
GABRA1-202ENST00000393943 GALMQ96C23 342 aa7.49□□□□□ -1.21
GABRA1-202ENST00000393943 TMEM56Q96MV1 263 aa7.49□□□□□ -1.21
GABRA1-202ENST00000393943 TMEM56-RWDD3S4R434 201 aa7.49□□□□□ -1.21
GABRA1-202ENST00000393943 A0A1W2PP11 408 aa7.49□□□□□ -1.21
GABRA1-202ENST00000393943 HS3ST1O14792 307 aa7.49□□□□□ -1.21
GABRA1-202ENST00000393943 SUPT4H1P63272 117 aaKnown RBP7.49□□□□□ -1.21
GABRA1-202ENST00000393943 QRFPP83859 136 aa7.49□□□□□ -1.21
GABRA1-202ENST00000393943 SYT13Q7L8C5 426 aa7.49□□□□□ -1.21
GABRA1-202ENST00000393943 CADM4Q8NFZ8 388 aa7.49□□□□□ -1.21
GABRA1-202ENST00000393943 RDH5Q92781 318 aa7.49□□□□□ -1.21
GABRA1-202ENST00000393943 APH1AQ96BI3 265 aa7.49□□□□□ -1.21
GABRA1-202ENST00000393943 UBE2ZQ9H832 354 aaPredicted RBP7.49□□□□□ -1.21
GABRA1-202ENST00000393943 SDF2L1Q9HCN8 221 aa7.49□□□□□ -1.21
GABRA1-202ENST00000393943 DCAF16Q9NXF7 216 aa7.49□□□□□ -1.21
GABRA1-202ENST00000393943 IGHV1OR21-1A0A087WYE8 117 aa7.49□□□□□ -1.21
GABRA1-202ENST00000393943 TMEM30CPA0ZSE6 113 aa7.49□□□□□ -1.21
GABRA1-202ENST00000393943 PRR19A6NJB7 356 aa7.49□□□□□ -1.21
GABRA1-202ENST00000393943 ZNF32P17041 273 aa7.49□□□□□ -1.21
GABRA1-202ENST00000393943 PRDX4Q13162 271 aa7.49□□□□□ -1.21
GABRA1-202ENST00000393943 CEACAM16Q2WEN9 425 aa7.49□□□□□ -1.21
GABRA1-202ENST00000393943 ETV3LQ6ZN32 361 aa7.49□□□□□ -1.21
GABRA1-202ENST00000393943 OR2M3Q8NG83 312 aa7.49□□□□□ -1.21
GABRA1-202ENST00000393943 GTF3AQ92664 365 aaKnown RBP7.49□□□□□ -1.21
GABRA1-202ENST00000393943 CHODLQ9H9P2 273 aa7.49□□□□□ -1.21
GABRA1-202ENST00000393943 TRAF3IP2O43734 574 aaPredicted RBP7.48□□□□□ -1.21
GABRA1-202ENST00000393943 B4GALT1P15291 398 aa7.48□□□□□ -1.21
GABRA1-202ENST00000393943 UCP1P25874 307 aa7.48□□□□□ -1.21
GABRA1-202ENST00000393943 GCH1P30793 250 aa7.48□□□□□ -1.21
GABRA1-202ENST00000393943 FGF8P55075 233 aaPredicted RBP7.48□□□□□ -1.21
GABRA1-202ENST00000393943 KRTDAPP60985 99 aa7.48□□□□□ -1.21
GABRA1-202ENST00000393943 RHOBP62745 196 aa7.48□□□□□ -1.21
GABRA1-202ENST00000393943 MESP2Q0VG99 397 aa7.48□□□□□ -1.21
GABRA1-202ENST00000393943 LANCL3Q6ZV70 420 aa7.48□□□□□ -1.21
GABRA1-202ENST00000393943 OR10G3Q8NGC4 313 aa7.48□□□□□ -1.21
GABRA1-202ENST00000393943 DAZAP1Q96EP5 407 aaKnown RBP7.48□□□□□ -1.21
GABRA1-202ENST00000393943 SLC25A22Q9H936 323 aa7.48□□□□□ -1.21
GABRA1-202ENST00000393943 GPR27Q9NS67 375 aa7.48□□□□□ -1.21
GABRA1-202ENST00000393943 ATP23Q9Y6H3 246 aa7.48□□□□□ -1.21
GABRA1-202ENST00000393943 ANAPC1Q9H1A4 1944 aa7.48□□□□□ -1.21
GABRA1-202ENST00000393943 METTL12A8MUP2 240 aa7.48□□□□□ -1.21
GABRA1-202ENST00000393943 OR3A1P47881 315 aa7.48□□□□□ -1.21
GABRA1-202ENST00000393943 FHITP49789 147 aa7.48□□□□□ -1.21
GABRA1-202ENST00000393943 SRSF7Q16629 238 aaKnown RBP eCLIP7.48□□□□□ -1.21
GABRA1-202ENST00000393943 ZNF774Q6NX45 483 aa7.48□□□□□ -1.21
GABRA1-202ENST00000393943 ZNF439Q8NDP4 499 aa7.48□□□□□ -1.21
GABRA1-202ENST00000393943 TAAR3PQ9P1P4 343 aa7.48□□□□□ -1.21
GABRA1-202ENST00000393943 SLC45A2Q9UMX9 530 aa7.48□□□□□ -1.21
GABRA1-202ENST00000393943 A0A1W2PQF6 199 aa7.48□□□□□ -1.21
GABRA1-202ENST00000393943 FCN1O00602 326 aa7.48□□□□□ -1.21
GABRA1-202ENST00000393943 KIR2DS2P43631 304 aa7.48□□□□□ -1.21
GABRA1-202ENST00000393943 GABRA2P47869 451 aa7.48□□□□□ -1.21
GABRA1-202ENST00000393943 FGF12P61328 243 aa7.48□□□□□ -1.21
GABRA1-202ENST00000393943 PMP22Q01453 160 aa7.48□□□□□ -1.21
GABRA1-202ENST00000393943 ICAM4Q14773 271 aa7.48□□□□□ -1.21
GABRA1-202ENST00000393943 CSRP2Q16527 193 aa7.48□□□□□ -1.21
GABRA1-202ENST00000393943 ZNF880Q6PDB4 577 aa7.48□□□□□ -1.21
GABRA1-202ENST00000393943 TGIF2LXQ8IUE1 241 aa7.48□□□□□ -1.21
GABRA1-202ENST00000393943 SLC24A4Q8NFF2 622 aa7.48□□□□□ -1.21
GABRA1-202ENST00000393943 OR5A2Q8NGI9 324 aa7.48□□□□□ -1.21
GABRA1-202ENST00000393943 TBX15Q96SF7 602 aa7.48□□□□□ -1.21
GABRA1-202ENST00000393943 HDHD3Q9BSH5 251 aaPredicted RBP7.48□□□□□ -1.21
GABRA1-202ENST00000393943 SMOC1Q9H4F8 434 aa7.48□□□□□ -1.21
GABRA1-202ENST00000393943 CCL28Q9NRJ3 127 aa7.48□□□□□ -1.21
GABRA1-202ENST00000393943 IGKV3D-11A0A0A0MRZ8 115 aa7.48□□□□□ -1.21
GABRA1-202ENST00000393943 CD99P14209 185 aa7.48□□□□□ -1.21
GABRA1-202ENST00000393943 SRD5A2P31213 254 aa7.48□□□□□ -1.21
GABRA1-202ENST00000393943 CHRNA7P36544 502 aa7.48□□□□□ -1.21
GABRA1-202ENST00000393943 SLC25A53Q5H9E4 307 aa7.48□□□□□ -1.21
GABRA1-202ENST00000393943 PTCRAQ6ISU1 281 aaPredicted RBP7.48□□□□□ -1.21
GABRA1-202ENST00000393943 WDR74Q6RFH5 385 aaPredicted RBP7.48□□□□□ -1.21
GABRA1-202ENST00000393943 ZNF808Q8N4W9 903 aaPredicted RBP7.48□□□□□ -1.21
GABRA1-202ENST00000393943 TAF15Q92804 592 aaKnown RBP eCLIP7.48□□□□□ -1.21
GABRA1-202ENST00000393943 DMRTA2Q96SC8 542 aa7.48□□□□□ -1.21
GABRA1-202ENST00000393943 PLA2G2FQ9BZM2 168 aa7.48□□□□□ -1.21
GABRA1-202ENST00000393943 ZNF665Q9H7R5 613 aa7.48□□□□□ -1.21
GABRA1-202ENST00000393943 TMEM167BQ9NRX6 74 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms