RNA–Protein interactions for RNA: ENST00000393452.7

TDP1-202, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best) BASIC

Gene TDP1, Length 2,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-202ENST00000393452 SAT2Q96F10 170 aaPredicted RBP7.66□□□□□ -1.18
TDP1-202ENST00000393452 SMIM8Q96KF7 97 aa7.66□□□□□ -1.18
TDP1-202ENST00000393452 C11orf1Q9H5F2 150 aa7.66□□□□□ -1.18
TDP1-202ENST00000393452 OR2S2Q9NQN1 319 aa7.66□□□□□ -1.18
TDP1-202ENST00000393452 MBNL3Q9NUK0 354 aaKnown RBP7.66□□□□□ -1.18
TDP1-202ENST00000393452 LPAR3Q9UBY5 353 aa7.66□□□□□ -1.18
TDP1-202ENST00000393452 PURGQ9UJV8 347 aaKnown RBP7.66□□□□□ -1.18
TDP1-202ENST00000393452 ZDHHC8Q9ULC8 765 aa7.66□□□□□ -1.18
TDP1-202ENST00000393452 CEP250Q9BV73 2442 aa7.66□□□□□ -1.18
TDP1-202ENST00000393452 GVINP1Q7Z2Y8 2422 aa7.66□□□□□ -1.18
TDP1-202ENST00000393452 CACNA1DQ01668 2161 aa7.66□□□□□ -1.18
TDP1-202ENST00000393452 A0A1B0GWJ7 208 aa7.66□□□□□ -1.18
TDP1-202ENST00000393452 NUDT19A8MXV4 375 aa7.66□□□□□ -1.18
TDP1-202ENST00000393452 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.66□□□□□ -1.18
TDP1-202ENST00000393452 SH2D1BO14796 132 aa7.66□□□□□ -1.18
TDP1-202ENST00000393452 MST1LQ2TV78 715 aa7.66□□□□□ -1.18
TDP1-202ENST00000393452 NMSQ5H8A3 153 aa7.66□□□□□ -1.18
TDP1-202ENST00000393452 IQCF2Q8IXL9 164 aa7.66□□□□□ -1.18
TDP1-202ENST00000393452 C11orf53Q8IXP5 236 aa7.66□□□□□ -1.18
TDP1-202ENST00000393452 CMTM1Q8IZ96 169 aa7.66□□□□□ -1.18
TDP1-202ENST00000393452 UBAC2Q8NBM4 344 aa7.66□□□□□ -1.18
TDP1-202ENST00000393452 LILRB1Q8NHL6 650 aaPredicted RBP7.66□□□□□ -1.18
TDP1-202ENST00000393452 IL22RA2Q969J5 263 aa7.66□□□□□ -1.18
TDP1-202ENST00000393452 KIRREL1Q96J84 757 aa7.66□□□□□ -1.18
TDP1-202ENST00000393452 BCL2L14Q9BZR8 327 aa7.66□□□□□ -1.18
TDP1-202ENST00000393452 TLNRD1Q9H1K6 362 aa7.66□□□□□ -1.18
TDP1-202ENST00000393452 ARV1Q9H2C2 271 aa7.66□□□□□ -1.18
TDP1-202ENST00000393452 ZC4H2Q9NQZ6 224 aa7.66□□□□□ -1.18
TDP1-202ENST00000393452 ASF1BQ9NVP2 202 aa7.66□□□□□ -1.18
TDP1-202ENST00000393452 GLS2Q9UI32 602 aa7.66□□□□□ -1.18
TDP1-202ENST00000393452 PROCRQ9UNN8 238 aa7.66□□□□□ -1.18
TDP1-202ENST00000393452 RCL1Q9Y2P8 373 aaKnown RBP7.66□□□□□ -1.18
TDP1-202ENST00000393452 UBE2J1Q9Y385 318 aaPredicted RBP7.66□□□□□ -1.18
TDP1-202ENST00000393452 POMT1Q9Y6A1 747 aa7.66□□□□□ -1.18
TDP1-202ENST00000393452 FRYQ5TBA9 3013 aa7.65□□□□□ -1.18
TDP1-202ENST00000393452 NKX2-6A6NCS4 301 aa7.65□□□□□ -1.18
TDP1-202ENST00000393452 H0Y980 276 aa7.65□□□□□ -1.18
TDP1-202ENST00000393452 PGLYRP1O75594 196 aaPredicted RBP7.65□□□□□ -1.18
TDP1-202ENST00000393452 NXPH2O95156 264 aa7.65□□□□□ -1.18
TDP1-202ENST00000393452 VDAC1P21796 283 aa7.65□□□□□ -1.18
TDP1-202ENST00000393452 LMO1P25800 156 aa7.65□□□□□ -1.18
TDP1-202ENST00000393452 BEND4Q6ZU67 534 aa7.65□□□□□ -1.18
TDP1-202ENST00000393452 ZNF695Q8IW36 515 aa7.65□□□□□ -1.18
TDP1-202ENST00000393452 C1orf174Q8IYL3 243 aa7.65□□□□□ -1.18
TDP1-202ENST00000393452 OR5D13Q8NGL4 314 aa7.65□□□□□ -1.18
TDP1-202ENST00000393452 ERGIC1Q969X5 290 aa7.65□□□□□ -1.18
TDP1-202ENST00000393452 ABHD14BQ96IU4 210 aa7.65□□□□□ -1.18
TDP1-202ENST00000393452 OPN3Q9H1Y3 402 aaPredicted RBP7.65□□□□□ -1.18
TDP1-202ENST00000393452 TINAGQ9UJW2 476 aa7.65□□□□□ -1.18
TDP1-202ENST00000393452 WIPI2Q9Y4P8 454 aa7.65□□□□□ -1.18
TDP1-202ENST00000393452 CADP27708 2225 aa7.65□□□□□ -1.19
TDP1-202ENST00000393452 ZFHX4Q86UP3 3567 aa7.65□□□□□ -1.19
TDP1-202ENST00000393452 IGHV2OR16-5A0A0B4J2B6 119 aa7.64□□□□□ -1.19
TDP1-202ENST00000393452 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.64□□□□□ -1.19
TDP1-202ENST00000393452 OR5H1A6NKK0 313 aa7.64□□□□□ -1.19
TDP1-202ENST00000393452 SIRPB1O00241 398 aa7.64□□□□□ -1.19
TDP1-202ENST00000393452 HSD17B6O14756 317 aa7.64□□□□□ -1.19
TDP1-202ENST00000393452 GPR137BO60478 399 aa7.64□□□□□ -1.19
TDP1-202ENST00000393452 F2RP25116 425 aa7.64□□□□□ -1.19
TDP1-202ENST00000393452 SULT1A2P50226 295 aa7.64□□□□□ -1.19
TDP1-202ENST00000393452 MBNL2Q5VZF2 373 aaKnown RBP7.64□□□□□ -1.19
TDP1-202ENST00000393452 BHLHA15Q7RTS1 189 aaPredicted RBP7.64□□□□□ -1.19
TDP1-202ENST00000393452 BPIFCQ8NFQ6 507 aa7.64□□□□□ -1.19
TDP1-202ENST00000393452 ARL11Q969Q4 196 aa7.64□□□□□ -1.19
TDP1-202ENST00000393452 SPIN2AQ99865 258 aa7.64□□□□□ -1.19
TDP1-202ENST00000393452 SPIN2BQ9BPZ2 258 aa7.64□□□□□ -1.19
TDP1-202ENST00000393452 ERRFI1Q9UJM3 462 aaPredicted RBP7.64□□□□□ -1.19
TDP1-202ENST00000393452 PRELID1Q9Y255 219 aa7.64□□□□□ -1.19
TDP1-202ENST00000393452 SLC25A15Q9Y619 301 aa7.64□□□□□ -1.19
TDP1-202ENST00000393452 IGHV1-18A0A0C4DH31 117 aa7.64□□□□□ -1.19
TDP1-202ENST00000393452 ZNF705EA8MWA4 302 aaPredicted RBP7.64□□□□□ -1.19
TDP1-202ENST00000393452 IGLV2-14P01704 120 aa7.64□□□□□ -1.19
TDP1-202ENST00000393452 GRPP07492 148 aa7.64□□□□□ -1.19
TDP1-202ENST00000393452 TESK1Q15569 626 aa7.64□□□□□ -1.19
TDP1-202ENST00000393452 HMGN3Q15651 99 aa7.64□□□□□ -1.19
TDP1-202ENST00000393452 EIF2S3LQ2VIR3 472 aaKnown RBP7.64□□□□□ -1.19
TDP1-202ENST00000393452 Q6ZR03 302 aa7.64□□□□□ -1.19
TDP1-202ENST00000393452 BSCL2Q96G97 398 aaPredicted RBP7.64□□□□□ -1.19
TDP1-202ENST00000393452 GPHA2Q96T91 129 aa7.64□□□□□ -1.19
TDP1-202ENST00000393452 CXXC4Q9H2H0 198 aa7.64□□□□□ -1.19
TDP1-202ENST00000393452 MMP26Q9NRE1 261 aa7.64□□□□□ -1.19
TDP1-202ENST00000393452 PLA2G2EQ9NZK7 142 aa7.64□□□□□ -1.19
TDP1-202ENST00000393452 TAAR3PQ9P1P4 343 aa7.64□□□□□ -1.19
TDP1-202ENST00000393452 OR1A1Q9P1Q5 309 aa7.64□□□□□ -1.19
TDP1-202ENST00000393452 CHD3Q12873 2000 aaKnown RBP7.64□□□□□ -1.19
TDP1-202ENST00000393452 PSPNO60542 156 aa7.63□□□□□ -1.19
TDP1-202ENST00000393452 HAND1O96004 215 aa7.63□□□□□ -1.19
TDP1-202ENST00000393452 HEXAP06865 529 aa7.63□□□□□ -1.19
TDP1-202ENST00000393452 NKX2-1P43699 371 aaPredicted RBP7.63□□□□□ -1.19
TDP1-202ENST00000393452 GNMTQ14749 295 aa7.63□□□□□ -1.19
TDP1-202ENST00000393452 ZNF718Q3SXZ3 478 aa7.63□□□□□ -1.19
TDP1-202ENST00000393452 FIP1L1Q6UN15 594 aaKnown RBP7.63□□□□□ -1.19
TDP1-202ENST00000393452 IL34Q6ZMJ4 242 aa7.63□□□□□ -1.19
TDP1-202ENST00000393452 RBMXL3Q8N7X1 1067 aaKnown RBP7.63□□□□□ -1.19
TDP1-202ENST00000393452 OR10V1Q8NGI7 309 aa7.63□□□□□ -1.19
TDP1-202ENST00000393452 WFDC1Q9HC57 220 aa7.63□□□□□ -1.19
TDP1-202ENST00000393452 TRAPPC2LQ9UL33 140 aa7.63□□□□□ -1.19
TDP1-202ENST00000393452 SPEF1Q9Y4P9 236 aa7.63□□□□□ -1.19
TDP1-202ENST00000393452 FAM215AQ9Y5M1 114 aa7.63□□□□□ -1.19
TDP1-202ENST00000393452 DCHS1Q96JQ0 3298 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms