RNA–Protein interactions for RNA: ENST00000393408.7

CBX1-202, Transcript of chromobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX1, Length 2,422 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-202ENST00000393408 SPINK14Q6IE38 97 aa16.09■□□□□ 0.17
CBX1-202ENST00000393408 C20orf204Q6ZNR8 217 aa16.09■□□□□ 0.17
CBX1-202ENST00000393408 GTF3AQ92664 365 aaKnown RBP16.09■□□□□ 0.17
CBX1-202ENST00000393408 ATP5SQ99766 215 aa16.09■□□□□ 0.17
CBX1-202ENST00000393408 ZNF552Q9H707 407 aaPredicted RBP16.09■□□□□ 0.17
CBX1-202ENST00000393408 TRIOBPQ9H2D6 2365 aa16.09■□□□□ 0.17
CBX1-202ENST00000393408 WRBO00258 174 aa16.09■□□□□ 0.17
CBX1-202ENST00000393408 IL24Q13007 206 aa16.09■□□□□ 0.17
CBX1-202ENST00000393408 RNPS1Q15287 305 aaKnown RBP16.09■□□□□ 0.17
CBX1-202ENST00000393408 ZNF506Q5JVG8 444 aa16.09■□□□□ 0.17
CBX1-202ENST00000393408 DCAF12Q5T6F0 453 aa16.09■□□□□ 0.17
CBX1-202ENST00000393408 TIPARPQ7Z3E1 657 aaKnown RBP16.09■□□□□ 0.17
CBX1-202ENST00000393408 TUSC5Q8IXB3 177 aa16.09■□□□□ 0.17
CBX1-202ENST00000393408 OR5A2Q8NGI9 324 aa16.09■□□□□ 0.17
CBX1-202ENST00000393408 RAB39BQ96DA2 213 aa16.09■□□□□ 0.17
CBX1-202ENST00000393408 HIPK2Q9H2X6 1198 aa16.09■□□□□ 0.17
CBX1-202ENST00000393408 RIMS4Q9H426 269 aaPredicted RBP16.09■□□□□ 0.17
CBX1-202ENST00000393408 A0A0G2JRQ6 117 aa16.08■□□□□ 0.17
CBX1-202ENST00000393408 SCAF4O95104 1147 aaKnown RBP16.08■□□□□ 0.17
CBX1-202ENST00000393408 CER1O95813 267 aa16.08■□□□□ 0.17
CBX1-202ENST00000393408 NGFP01138 241 aa16.08■□□□□ 0.17
CBX1-202ENST00000393408 IFNA17P01571 189 aa16.08■□□□□ 0.17
CBX1-202ENST00000393408 F2RP25116 425 aa16.08■□□□□ 0.17
CBX1-202ENST00000393408 OR8G1Q15617 311 aa16.08■□□□□ 0.17
CBX1-202ENST00000393408 AKR1C8PQ5T2L2 129 aa16.08■□□□□ 0.17
CBX1-202ENST00000393408 TCEAL3Q969E4 200 aa16.08■□□□□ 0.17
CBX1-202ENST00000393408 CALHM2Q9HA72 323 aa16.08■□□□□ 0.17
CBX1-202ENST00000393408 LRFN1Q9P244 771 aa16.08■□□□□ 0.17
CBX1-202ENST00000393408 COL27A1Q8IZC6 1860 aaPredicted RBP16.08■□□□□ 0.16
CBX1-202ENST00000393408 TRBV6-6A0A0A6YYG2 114 aa16.08■□□□□ 0.16
CBX1-202ENST00000393408 ZNF324BQ6AW86 544 aaPredicted RBP16.08■□□□□ 0.16
CBX1-202ENST00000393408 LINC00596Q86U02 117 aa16.08■□□□□ 0.16
CBX1-202ENST00000393408 FRYLO94915 3013 aa16.08■□□□□ 0.16
CBX1-202ENST00000393408 HSPB1P04792 205 aaKnown RBP16.07■□□□□ 0.16
CBX1-202ENST00000393408 FABP1P07148 127 aa16.07■□□□□ 0.16
CBX1-202ENST00000393408 CELA3AP09093 270 aa16.07■□□□□ 0.16
CBX1-202ENST00000393408 CLDN18P56856 261 aa16.07■□□□□ 0.16
CBX1-202ENST00000393408 TAS2R30P59541 319 aa16.07■□□□□ 0.16
CBX1-202ENST00000393408 C6orf15Q6UXA7 325 aaPredicted RBP16.07■□□□□ 0.16
CBX1-202ENST00000393408 DPPA3Q6W0C5 159 aa16.07■□□□□ 0.16
CBX1-202ENST00000393408 ZNF295-AS1Q8N0V1 137 aa16.07■□□□□ 0.16
CBX1-202ENST00000393408 CLDND2Q8NHS1 167 aa16.07■□□□□ 0.16
CBX1-202ENST00000393408 ZNF703Q9H7S9 590 aaPredicted RBP16.07■□□□□ 0.16
CBX1-202ENST00000393408 NIT2Q9NQR4 276 aa16.07■□□□□ 0.16
CBX1-202ENST00000393408 GSN-AS1Q9NRJ2 163 aa16.07■□□□□ 0.16
CBX1-202ENST00000393408 TMEM265A0A087WTH1 108 aa16.07■□□□□ 0.16
CBX1-202ENST00000393408 A0A087WWC5 75 aa16.07■□□□□ 0.16
CBX1-202ENST00000393408 H0YL77 283 aa16.07■□□□□ 0.16
CBX1-202ENST00000393408 CLN5O75503 358 aa16.07■□□□□ 0.16
CBX1-202ENST00000393408 ZNF880Q6PDB4 577 aa16.07■□□□□ 0.16
CBX1-202ENST00000393408 CYB561D1Q8N8Q1 229 aa16.07■□□□□ 0.16
CBX1-202ENST00000393408 TCTEX1D2Q8WW35 142 aa16.07■□□□□ 0.16
CBX1-202ENST00000393408 OR5P3Q8WZ94 311 aa16.07■□□□□ 0.16
CBX1-202ENST00000393408 GPR146Q96CH1 333 aa16.07■□□□□ 0.16
CBX1-202ENST00000393408 POM121L2Q96KW2 1035 aa16.07■□□□□ 0.16
CBX1-202ENST00000393408 ZNF488Q96MN9 340 aa16.07■□□□□ 0.16
CBX1-202ENST00000393408 HIST1H2AAQ96QV6 131 aa16.07■□□□□ 0.16
CBX1-202ENST00000393408 PLK3Q9H4B4 646 aa16.07■□□□□ 0.16
CBX1-202ENST00000393408 OR2W1Q9Y3N9 320 aa16.07■□□□□ 0.16
CBX1-202ENST00000393408 VPS13AQ96RL7 3174 aa16.07■□□□□ 0.16
CBX1-202ENST00000393408 KMT2EQ8IZD2 1858 aa16.07■□□□□ 0.16
CBX1-202ENST00000393408 CD300LBA8K4G0 201 aa16.06■□□□□ 0.16
CBX1-202ENST00000393408 ZNF727A8MUV8 499 aa16.06■□□□□ 0.16
CBX1-202ENST00000393408 LINC00587B1AMM8 73 aa16.06■□□□□ 0.16
CBX1-202ENST00000393408 FBP1P09467 338 aa16.06■□□□□ 0.16
CBX1-202ENST00000393408 TLE4Q04727 773 aa16.06■□□□□ 0.16
CBX1-202ENST00000393408 ZNF429Q86V71 674 aa16.06■□□□□ 0.16
CBX1-202ENST00000393408 H1FOOQ8IZA3 346 aaPredicted RBP16.06■□□□□ 0.16
CBX1-202ENST00000393408 OR2M7Q8NG81 312 aa16.06■□□□□ 0.16
CBX1-202ENST00000393408 RBMXL1Q96E39 390 aaKnown RBP16.06■□□□□ 0.16
CBX1-202ENST00000393408 TRAV24A0A0B4J272 114 aa16.06■□□□□ 0.16
CBX1-202ENST00000393408 KIAA1324LA8MWY0 1029 aaPredicted RBP16.06■□□□□ 0.16
CBX1-202ENST00000393408 SLC25A6P12236 298 aa16.06■□□□□ 0.16
CBX1-202ENST00000393408 TAGLN2P37802 199 aaKnown RBP16.06■□□□□ 0.16
CBX1-202ENST00000393408 EIF2S3P41091 472 aaKnown RBP16.06■□□□□ 0.16
CBX1-202ENST00000393408 CEBPGP53567 150 aa16.06■□□□□ 0.16
CBX1-202ENST00000393408 UBE2KP61086 200 aa16.06■□□□□ 0.16
CBX1-202ENST00000393408 FAM173AQ9BQD7 235 aa16.06■□□□□ 0.16
CBX1-202ENST00000393408 WSB1Q9Y6I7 421 aa16.06■□□□□ 0.16
CBX1-202ENST00000393408 A0A1B0GU03 582 aa16.05■□□□□ 0.16
CBX1-202ENST00000393408 HS3ST1O14792 307 aa16.05■□□□□ 0.16
CBX1-202ENST00000393408 TXNL1O43396 289 aa16.05■□□□□ 0.16
CBX1-202ENST00000393408 PPIHO43447 177 aaKnown RBP16.05■□□□□ 0.16
CBX1-202ENST00000393408 NEURL1O76050 574 aa16.05■□□□□ 0.16
CBX1-202ENST00000393408 DFFBO76075 338 aa16.05■□□□□ 0.16
CBX1-202ENST00000393408 HBE1P02100 147 aa16.05■□□□□ 0.16
CBX1-202ENST00000393408 HLA-DRB3P79483 266 aa16.05■□□□□ 0.16
CBX1-202ENST00000393408 STX12Q86Y82 276 aa16.05■□□□□ 0.16
CBX1-202ENST00000393408 RDH5Q92781 318 aa16.05■□□□□ 0.16
CBX1-202ENST00000393408 THOC3Q96J01 351 aaKnown RBP16.05■□□□□ 0.16
CBX1-202ENST00000393408 ZNF407Q9C0G0 2248 aa16.05■□□□□ 0.16
CBX1-202ENST00000393408 S100GP29377 79 aa16.05■□□□□ 0.16
CBX1-202ENST00000393408 DLK1P80370 383 aa16.05■□□□□ 0.16
CBX1-202ENST00000393408 UBALD2Q8IYN6 164 aa16.05■□□□□ 0.16
CBX1-202ENST00000393408 OR10J5Q8NHC4 309 aa16.05■□□□□ 0.16
CBX1-202ENST00000393408 CABLES2Q9BTV7 478 aa16.05■□□□□ 0.16
CBX1-202ENST00000393408 LOXL2Q9Y4K0 774 aa16.05■□□□□ 0.16
CBX1-202ENST00000393408 LILRA1O75019 489 aa16.04■□□□□ 0.16
CBX1-202ENST00000393408 SYNGR4O95473 234 aa16.04■□□□□ 0.16
CBX1-202ENST00000393408 WNT2P09544 360 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms