RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 SIRPB1O00241 398 aa6.67□□□□□ -1.34
VTI1A-201ENST00000393077 PITX3O75364 302 aa6.67□□□□□ -1.34
VTI1A-201ENST00000393077 S1PR2O95136 353 aa6.67□□□□□ -1.34
VTI1A-201ENST00000393077 PSMB5P28074 263 aa6.67□□□□□ -1.34
VTI1A-201ENST00000393077 CDKN1AP38936 164 aa6.67□□□□□ -1.34
VTI1A-201ENST00000393077 NPBWR2P48146 333 aa6.67□□□□□ -1.34
VTI1A-201ENST00000393077 RPS20P60866 119 aaKnown RBP6.67□□□□□ -1.34
VTI1A-201ENST00000393077 ZNF117Q03924 483 aa6.67□□□□□ -1.34
VTI1A-201ENST00000393077 MFSD12Q6NUT3 480 aa6.67□□□□□ -1.34
VTI1A-201ENST00000393077 NRSN1Q8IZ57 195 aa6.67□□□□□ -1.34
VTI1A-201ENST00000393077 OR10V1Q8NGI7 309 aa6.67□□□□□ -1.34
VTI1A-201ENST00000393077 KCNE4Q8WWG9 221 aa6.67□□□□□ -1.34
VTI1A-201ENST00000393077 ARHGAP5-AS1Q96IT6 56 aa6.67□□□□□ -1.34
VTI1A-201ENST00000393077 NAA60Q9H7X0 242 aa6.67□□□□□ -1.34
VTI1A-201ENST00000393077 JKAMPQ9P055 326 aa6.67□□□□□ -1.34
VTI1A-201ENST00000393077 ZDBF2Q9HCK1 2354 aa6.67□□□□□ -1.34
VTI1A-201ENST00000393077 A0A1B0GUS0 222 aa6.67□□□□□ -1.34
VTI1A-201ENST00000393077 RAMP3O60896 148 aa6.67□□□□□ -1.34
VTI1A-201ENST00000393077 HIST1H1TP22492 207 aaPredicted RBP6.67□□□□□ -1.34
VTI1A-201ENST00000393077 IL3RAP26951 378 aa6.67□□□□□ -1.34
VTI1A-201ENST00000393077 P2RY2P41231 377 aa6.67□□□□□ -1.34
VTI1A-201ENST00000393077 GPM6AP51674 278 aa6.67□□□□□ -1.34
VTI1A-201ENST00000393077 METAP1P53582 386 aa6.67□□□□□ -1.34
VTI1A-201ENST00000393077 LRRC10Q5BKY1 277 aa6.67□□□□□ -1.34
VTI1A-201ENST00000393077 ACTL10Q5JWF8 245 aa6.67□□□□□ -1.34
VTI1A-201ENST00000393077 ADAT3Q96EY9 351 aaPredicted RBP6.67□□□□□ -1.34
VTI1A-201ENST00000393077 SDF2Q99470 211 aa6.67□□□□□ -1.34
VTI1A-201ENST00000393077 SLC25A22Q9H936 323 aa6.67□□□□□ -1.34
VTI1A-201ENST00000393077 GCM1Q9NP62 436 aa6.67□□□□□ -1.34
VTI1A-201ENST00000393077 THYN1Q9P016 225 aa6.67□□□□□ -1.34
VTI1A-201ENST00000393077 CES1P1Q9UKY3 287 aa6.67□□□□□ -1.34
VTI1A-201ENST00000393077 PCNTO95613 3336 aa6.67□□□□□ -1.34
VTI1A-201ENST00000393077 TRBV5-4A0A0C4DH59 114 aa6.67□□□□□ -1.34
VTI1A-201ENST00000393077 C7orf71A4D174 169 aa6.67□□□□□ -1.34
VTI1A-201ENST00000393077 J3KRW8 73 aa6.67□□□□□ -1.34
VTI1A-201ENST00000393077 TOMM40O96008 361 aa6.67□□□□□ -1.34
VTI1A-201ENST00000393077 CD55P08174 381 aa6.67□□□□□ -1.34
VTI1A-201ENST00000393077 PAX1P15863 534 aa6.67□□□□□ -1.34
VTI1A-201ENST00000393077 NPY1RP25929 384 aa6.67□□□□□ -1.34
VTI1A-201ENST00000393077 HTR1DP28221 377 aa6.67□□□□□ -1.34
VTI1A-201ENST00000393077 APOBEC3AP31941 199 aaPredicted RBP6.67□□□□□ -1.34
VTI1A-201ENST00000393077 RELBQ01201 579 aa6.67□□□□□ -1.34
VTI1A-201ENST00000393077 MESP2Q0VG99 397 aa6.67□□□□□ -1.34
VTI1A-201ENST00000393077 TRMT12Q53H54 448 aaKnown RBP6.67□□□□□ -1.34
VTI1A-201ENST00000393077 VAX1Q5SQQ9 334 aa6.67□□□□□ -1.34
VTI1A-201ENST00000393077 TSPO2Q5TGU0 170 aa6.67□□□□□ -1.34
VTI1A-201ENST00000393077 PLCXD3Q63HM9 321 aa6.67□□□□□ -1.34
VTI1A-201ENST00000393077 FCRL6Q6DN72 434 aa6.67□□□□□ -1.34
VTI1A-201ENST00000393077 ZNF595Q8IYB9 648 aa6.67□□□□□ -1.34
VTI1A-201ENST00000393077 ARHGEF39Q8N4T4 335 aa6.67□□□□□ -1.34
VTI1A-201ENST00000393077 TMEM252Q8N6L7 170 aa6.67□□□□□ -1.34
VTI1A-201ENST00000393077 OR2K2Q8NGT1 345 aa6.67□□□□□ -1.34
VTI1A-201ENST00000393077 ASB10Q8WXI3 467 aa6.67□□□□□ -1.34
VTI1A-201ENST00000393077 CTHRC1Q96CG8 243 aa6.67□□□□□ -1.34
VTI1A-201ENST00000393077 RSG1Q9BU20 258 aa6.67□□□□□ -1.34
VTI1A-201ENST00000393077 ELOVL5Q9NYP7 299 aa6.67□□□□□ -1.34
VTI1A-201ENST00000393077 BRCA1P38398 1863 aaKnown RBP6.67□□□□□ -1.34
VTI1A-201ENST00000393077 WDR90Q96KV7 1748 aa6.67□□□□□ -1.34
VTI1A-201ENST00000393077 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.66□□□□□ -1.34
VTI1A-201ENST00000393077 PPIAL4DF5H284 164 aa6.66□□□□□ -1.34
VTI1A-201ENST00000393077 H3BUT2 72 aa6.66□□□□□ -1.34
VTI1A-201ENST00000393077 ADH4P08319 380 aa6.66□□□□□ -1.34
VTI1A-201ENST00000393077 HIST1H1EP10412 219 aaKnown RBP6.66□□□□□ -1.34
VTI1A-201ENST00000393077 DRD1P21728 446 aa6.66□□□□□ -1.34
VTI1A-201ENST00000393077 PPOXP50336 477 aa6.66□□□□□ -1.34
VTI1A-201ENST00000393077 FMODQ06828 376 aa6.66□□□□□ -1.34
VTI1A-201ENST00000393077 EIF4EBP2Q13542 120 aaPredicted RBP6.66□□□□□ -1.34
VTI1A-201ENST00000393077 EXOSC7Q15024 291 aaKnown RBP6.66□□□□□ -1.34
VTI1A-201ENST00000393077 FAM71F2Q6NXP2 309 aa6.66□□□□□ -1.34
VTI1A-201ENST00000393077 ZNF547Q8IVP9 402 aa6.66□□□□□ -1.34
VTI1A-201ENST00000393077 RLN3Q8WXF3 142 aa6.66□□□□□ -1.34
VTI1A-201ENST00000393077 POM121L2Q96KW2 1035 aa6.66□□□□□ -1.34
VTI1A-201ENST00000393077 PELI2Q9HAT8 420 aa6.66□□□□□ -1.34
VTI1A-201ENST00000393077 TRAPPC2LQ9UL33 140 aa6.66□□□□□ -1.34
VTI1A-201ENST00000393077 MRPS17Q9Y2R5 130 aaKnown RBP6.66□□□□□ -1.34
VTI1A-201ENST00000393077 SPCS1Q9Y6A9 102 aa6.66□□□□□ -1.34
VTI1A-201ENST00000393077 CDIPTO14735 213 aa6.66□□□□□ -1.34
VTI1A-201ENST00000393077 LINC01565O15544 149 aa6.66□□□□□ -1.34
VTI1A-201ENST00000393077 ADMP35318 185 aa6.66□□□□□ -1.34
VTI1A-201ENST00000393077 MDH2P40926 338 aaKnown RBP6.66□□□□□ -1.34
VTI1A-201ENST00000393077 GFRA1P56159 465 aa6.66□□□□□ -1.34
VTI1A-201ENST00000393077 RPL23P62829 140 aaKnown RBP6.66□□□□□ -1.34
VTI1A-201ENST00000393077 NNATQ16517 81 aa6.66□□□□□ -1.34
VTI1A-201ENST00000393077 C1orf53Q5VUE5 145 aa6.66□□□□□ -1.34
VTI1A-201ENST00000393077 FBXL14Q8N1E6 418 aa6.66□□□□□ -1.34
VTI1A-201ENST00000393077 OR4P4Q8NGL7 312 aa6.66□□□□□ -1.34
VTI1A-201ENST00000393077 PLA2G3Q9NZ20 509 aa6.66□□□□□ -1.34
VTI1A-201ENST00000393077 LRP12Q9Y561 859 aa6.66□□□□□ -1.34
VTI1A-201ENST00000393077 GTF3C1Q12789 2109 aa6.66□□□□□ -1.34
VTI1A-201ENST00000393077 RP1P56715 2156 aa6.66□□□□□ -1.34
VTI1A-201ENST00000393077 TRAV9-2A0A087WT02 112 aa6.66□□□□□ -1.34
VTI1A-201ENST00000393077 SCGB1A1P11684 91 aa6.66□□□□□ -1.34
VTI1A-201ENST00000393077 BSGP35613 385 aa6.66□□□□□ -1.34
VTI1A-201ENST00000393077 PSG9Q00887 426 aa6.66□□□□□ -1.34
VTI1A-201ENST00000393077 FAM162BQ5T6X4 162 aa6.66□□□□□ -1.34
VTI1A-201ENST00000393077 TCF23Q7RTU1 214 aa6.66□□□□□ -1.34
VTI1A-201ENST00000393077 ASB5Q8WWX0 329 aa6.66□□□□□ -1.34
VTI1A-201ENST00000393077 ZNF703Q9H7S9 590 aaPredicted RBP6.66□□□□□ -1.34
VTI1A-201ENST00000393077 AKIRIN1Q9H9L7 192 aaPredicted RBP6.66□□□□□ -1.34
VTI1A-201ENST00000393077 TUBD1Q9UJT1 453 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms