RNA–Protein interactions for RNA: ENST00000392903.3

SHTN1-204, Transcript of shootin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHTN1, Length 2,400 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-204ENST00000392903 ZNF799Q96GE5 643 aa12.94□□□□□ -0.34
SHTN1-204ENST00000392903 PIGLQ9Y2B2 252 aa12.94□□□□□ -0.34
SHTN1-204ENST00000392903 ASPMQ8IZT6 3477 aa12.93□□□□□ -0.34
SHTN1-204ENST00000392903 LOC102723971A0A1B0GUV8 181 aa12.93□□□□□ -0.34
SHTN1-204ENST00000392903 GJE1A6NN92 205 aa12.93□□□□□ -0.34
SHTN1-204ENST00000392903 GEMIN2O14893 280 aaKnown RBP12.93□□□□□ -0.34
SHTN1-204ENST00000392903 CEACAM1P13688 526 aa12.93□□□□□ -0.34
SHTN1-204ENST00000392903 CTSSP25774 331 aa12.93□□□□□ -0.34
SHTN1-204ENST00000392903 CYB561P49447 251 aa12.93□□□□□ -0.34
SHTN1-204ENST00000392903 SSPNQ14714 243 aa12.93□□□□□ -0.34
SHTN1-204ENST00000392903 FAM90A2PQ658T7 463 aa12.93□□□□□ -0.34
SHTN1-204ENST00000392903 C20orf196Q8IYI0 205 aa12.93□□□□□ -0.34
SHTN1-204ENST00000392903 OR4X1Q8NH49 305 aa12.93□□□□□ -0.34
SHTN1-204ENST00000392903 PIGTQ969N2 578 aa12.93□□□□□ -0.34
SHTN1-204ENST00000392903 ELL3Q9HB65 397 aaPredicted RBP12.93□□□□□ -0.34
SHTN1-204ENST00000392903 FREM1Q5H8C1 2179 aa12.93□□□□□ -0.34
SHTN1-204ENST00000392903 DNAJC13O75165 2243 aa12.93□□□□□ -0.34
SHTN1-204ENST00000392903 LRRC3CA6NJW4 275 aa12.93□□□□□ -0.34
SHTN1-204ENST00000392903 DFFBO76075 338 aa12.93□□□□□ -0.34
SHTN1-204ENST00000392903 IGHEP01854 428 aa12.93□□□□□ -0.34
SHTN1-204ENST00000392903 FCGR2AP12318 317 aa12.93□□□□□ -0.34
SHTN1-204ENST00000392903 B4GALT1P15291 398 aa12.93□□□□□ -0.34
SHTN1-204ENST00000392903 RAB4AP20338 218 aa12.93□□□□□ -0.34
SHTN1-204ENST00000392903 GDF1P27539 372 aa12.93□□□□□ -0.34
SHTN1-204ENST00000392903 OR5L1Q8NGL2 311 aa12.93□□□□□ -0.34
SHTN1-204ENST00000392903 OR1P1Q8NH06 330 aa12.93□□□□□ -0.34
SHTN1-204ENST00000392903 CA5BP1Q8WTZ4 195 aa12.93□□□□□ -0.34
SHTN1-204ENST00000392903 HAS2Q92819 552 aa12.93□□□□□ -0.34
SHTN1-204ENST00000392903 PLEKHF2Q9H8W4 249 aa12.93□□□□□ -0.34
SHTN1-204ENST00000392903 ZNF407Q9C0G0 2248 aa12.93□□□□□ -0.34
SHTN1-204ENST00000392903 TRAV1-1A0A0B4J248 108 aa12.92□□□□□ -0.34
SHTN1-204ENST00000392903 ZNF850A8MQ14 1090 aa12.92□□□□□ -0.34
SHTN1-204ENST00000392903 DHRS3O75911 302 aa12.92□□□□□ -0.34
SHTN1-204ENST00000392903 CDS2O95674 445 aa12.92□□□□□ -0.34
SHTN1-204ENST00000392903 GABRR1P24046 479 aa12.92□□□□□ -0.34
SHTN1-204ENST00000392903 APLNRP35414 380 aa12.92□□□□□ -0.34
SHTN1-204ENST00000392903 CLDN15P56746 228 aa12.92□□□□□ -0.34
SHTN1-204ENST00000392903 PHLDA2Q53GA4 152 aa12.92□□□□□ -0.34
SHTN1-204ENST00000392903 ZNF774Q6NX45 483 aa12.92□□□□□ -0.34
SHTN1-204ENST00000392903 OR10A7Q8NGE5 316 aa12.92□□□□□ -0.34
SHTN1-204ENST00000392903 OR10D3Q8NH80 312 aa12.92□□□□□ -0.34
SHTN1-204ENST00000392903 PSMF1Q92530 271 aa12.92□□□□□ -0.34
SHTN1-204ENST00000392903 ZNF845Q96IR2 970 aaPredicted RBP12.92□□□□□ -0.34
SHTN1-204ENST00000392903 THOC3Q96J01 351 aaKnown RBP12.92□□□□□ -0.34
SHTN1-204ENST00000392903 Q96M66 194 aa12.92□□□□□ -0.34
SHTN1-204ENST00000392903 CABLES2Q9BTV7 478 aa12.92□□□□□ -0.34
SHTN1-204ENST00000392903 LYRM2Q9NU23 88 aaPredicted RBP12.92□□□□□ -0.34
SHTN1-204ENST00000392903 SLC7A11Q9UPY5 501 aa12.92□□□□□ -0.34
SHTN1-204ENST00000392903 MED13Q9UHV7 2174 aa12.92□□□□□ -0.34
SHTN1-204ENST00000392903 IGHV3-9P01782 118 aa12.92□□□□□ -0.34
SHTN1-204ENST00000392903 DTYMKP23919 212 aa12.92□□□□□ -0.34
SHTN1-204ENST00000392903 FAM27BQ5VT28 67 aa12.92□□□□□ -0.34
SHTN1-204ENST00000392903 SLC35G3Q8N808 338 aa12.92□□□□□ -0.34
SHTN1-204ENST00000392903 SRD5A3Q9H8P0 318 aa12.92□□□□□ -0.34
SHTN1-204ENST00000392903 CALHM2Q9HA72 323 aa12.92□□□□□ -0.34
SHTN1-204ENST00000392903 FOXJ2Q9P0K8 574 aa12.92□□□□□ -0.34
SHTN1-204ENST00000392903 COL27A1Q8IZC6 1860 aaPredicted RBP12.91□□□□□ -0.34
SHTN1-204ENST00000392903 C9orf172C9J069 976 aa12.91□□□□□ -0.34
SHTN1-204ENST00000392903 HIST1H3AP68431 136 aa12.91□□□□□ -0.34
SHTN1-204ENST00000392903 FOXL2NBQ6ZUU3 175 aa12.91□□□□□ -0.34
SHTN1-204ENST00000392903 SLC25A26Q70HW3 274 aa12.91□□□□□ -0.34
SHTN1-204ENST00000392903 AAED1Q7RTV5 226 aa12.91□□□□□ -0.34
SHTN1-204ENST00000392903 TMEM252Q8N6L7 170 aa12.91□□□□□ -0.34
SHTN1-204ENST00000392903 NAXEQ8NCW5 288 aa12.91□□□□□ -0.34
SHTN1-204ENST00000392903 OR5C1Q8NGR4 320 aa12.91□□□□□ -0.34
SHTN1-204ENST00000392903 ABHD3Q8WU67 409 aa12.91□□□□□ -0.34
SHTN1-204ENST00000392903 SPTSSAQ969W0 71 aa12.91□□□□□ -0.34
SHTN1-204ENST00000392903 STRADBQ9C0K7 418 aa12.91□□□□□ -0.34
SHTN1-204ENST00000392903 CTDSP1Q9GZU7 261 aa12.91□□□□□ -0.34
SHTN1-204ENST00000392903 LOC400499M0QZD8 3231 aa12.91□□□□□ -0.34
SHTN1-204ENST00000392903 A0A0U1RQV5 110 aa12.91□□□□□ -0.34
SHTN1-204ENST00000392903 A0A1W2PNU3 283 aaPredicted RBP12.91□□□□□ -0.34
SHTN1-204ENST00000392903 ZNF716A6NP11 495 aa12.91□□□□□ -0.34
SHTN1-204ENST00000392903 PROB1E7EW31 1015 aa12.91□□□□□ -0.34
SHTN1-204ENST00000392903 IGLV3-1P01715 115 aa12.91□□□□□ -0.34
SHTN1-204ENST00000392903 TK1P04183 234 aa12.91□□□□□ -0.34
SHTN1-204ENST00000392903 SERPINA7P05543 415 aa12.91□□□□□ -0.34
SHTN1-204ENST00000392903 GLI4P10075 376 aa12.91□□□□□ -0.34
SHTN1-204ENST00000392903 OTX1P32242 354 aaPredicted RBP12.91□□□□□ -0.34
SHTN1-204ENST00000392903 FXYD4P59646 89 aa12.91□□□□□ -0.34
SHTN1-204ENST00000392903 RAB11AP62491 216 aa12.91□□□□□ -0.34
SHTN1-204ENST00000392903 MRPS34P82930 218 aaKnown RBP12.91□□□□□ -0.34
SHTN1-204ENST00000392903 CMTM1Q8IZ96 169 aa12.91□□□□□ -0.34
SHTN1-204ENST00000392903 ADGRG7Q96K78 797 aa12.91□□□□□ -0.34
SHTN1-204ENST00000392903 ATG101Q9BSB4 218 aa12.91□□□□□ -0.34
SHTN1-204ENST00000392903 SF3B5Q9BWJ5 86 aaKnown RBP12.91□□□□□ -0.34
SHTN1-204ENST00000392903 SNHG12Q9BXW3 62 aa12.91□□□□□ -0.34
SHTN1-204ENST00000392903 LRFN1Q9P244 771 aa12.91□□□□□ -0.34
SHTN1-204ENST00000392903 TTC28Q96AY4 2481 aa12.91□□□□□ -0.34
SHTN1-204ENST00000392903 PHF1O43189 567 aaPredicted RBP12.9□□□□□ -0.34
SHTN1-204ENST00000392903 OMGP23515 440 aa12.9□□□□□ -0.34
SHTN1-204ENST00000392903 NKX2-1P43699 371 aaPredicted RBP12.9□□□□□ -0.34
SHTN1-204ENST00000392903 RRADP55042 308 aa12.9□□□□□ -0.34
SHTN1-204ENST00000392903 UCP3P55916 312 aa12.9□□□□□ -0.34
SHTN1-204ENST00000392903 SRYQ05066 204 aa12.9□□□□□ -0.34
SHTN1-204ENST00000392903 RAB35Q15286 201 aa12.9□□□□□ -0.34
SHTN1-204ENST00000392903 P4HA3Q7Z4N8 544 aa12.9□□□□□ -0.34
SHTN1-204ENST00000392903 KCNE4Q8WWG9 221 aa12.9□□□□□ -0.34
SHTN1-204ENST00000392903 R3HDM4Q96D70 268 aa12.9□□□□□ -0.34
SHTN1-204ENST00000392903 SDF2L1Q9HCN8 221 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 125 ms