RNA–Protein interactions for RNA: ENST00000391941.6

ERCC2-201, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC2, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-201ENST00000391941 ZNF16P17020 682 aaPredicted RBP15.43■□□□□ 0.06
ERCC2-201ENST00000391941 ZNF726P1Q15940 193 aa15.43■□□□□ 0.06
ERCC2-201ENST00000391941 VASH2Q86V25 355 aa15.43■□□□□ 0.06
ERCC2-201ENST00000391941 CCDC74BQ96LY2 380 aa15.43■□□□□ 0.06
ERCC2-201ENST00000391941 WNT5BQ9H1J7 359 aa15.43■□□□□ 0.06
ERCC2-201ENST00000391941 NOSIPQ9Y314 301 aaKnown RBP15.43■□□□□ 0.06
ERCC2-201ENST00000391941 IGHV5-10-1A0A0J9YXX1 117 aa15.43■□□□□ 0.06
ERCC2-201ENST00000391941 SEC14L6B5MCN3 397 aa15.43■□□□□ 0.06
ERCC2-201ENST00000391941 BCAT2O15382 392 aaPredicted RBP15.43■□□□□ 0.06
ERCC2-201ENST00000391941 GLIPR1P48060 266 aa15.43■□□□□ 0.06
ERCC2-201ENST00000391941 RTP5Q14D33 572 aa15.43■□□□□ 0.06
ERCC2-201ENST00000391941 ZNF385CQ66K41 422 aaPredicted RBP15.43■□□□□ 0.06
ERCC2-201ENST00000391941 CACNA1DQ01668 2161 aa15.43■□□□□ 0.06
ERCC2-201ENST00000391941 SMG1Q96Q15 3661 aaKnown RBP15.43■□□□□ 0.06
ERCC2-201ENST00000391941 TRAPPC6AO75865 159 aa15.42■□□□□ 0.06
ERCC2-201ENST00000391941 VAMP5O95183 116 aa15.42■□□□□ 0.06
ERCC2-201ENST00000391941 LIFP15018 202 aa15.42■□□□□ 0.06
ERCC2-201ENST00000391941 HLA-DRB3P79483 266 aa15.42■□□□□ 0.06
ERCC2-201ENST00000391941 HOXA4Q00056 320 aaPredicted RBP15.42■□□□□ 0.06
ERCC2-201ENST00000391941 LRP11Q86VZ4 500 aa15.42■□□□□ 0.06
ERCC2-201ENST00000391941 POM121Q96HA1 1249 aa15.42■□□□□ 0.06
ERCC2-201ENST00000391941 UNKLQ9H9P5 680 aaKnown RBP15.42■□□□□ 0.06
ERCC2-201ENST00000391941 hCG_38984A0A1B0GV85 526 aa15.42■□□□□ 0.06
ERCC2-201ENST00000391941 PHOX2AO14813 284 aa15.42■□□□□ 0.06
ERCC2-201ENST00000391941 HSPA12AO43301 675 aa15.42■□□□□ 0.06
ERCC2-201ENST00000391941 PSG2P11465 335 aa15.42■□□□□ 0.06
ERCC2-201ENST00000391941 FAM90A2PQ658T7 463 aa15.42■□□□□ 0.06
ERCC2-201ENST00000391941 OR5T1Q8NG75 326 aa15.42■□□□□ 0.06
ERCC2-201ENST00000391941 OR56B2PQ8NGI1 322 aa15.42■□□□□ 0.06
ERCC2-201ENST00000391941 RNASE11Q8TAA1 199 aaKnown RBP15.42■□□□□ 0.06
ERCC2-201ENST00000391941 TMEM38BQ9NVV0 291 aa15.42■□□□□ 0.06
ERCC2-201ENST00000391941 TMEM42Q69YG0 159 aa15.42■□□□□ 0.06
ERCC2-201ENST00000391941 FAM53AQ6NSI3 398 aaPredicted RBP15.42■□□□□ 0.06
ERCC2-201ENST00000391941 GFOD1Q9NXC2 390 aa15.42■□□□□ 0.06
ERCC2-201ENST00000391941 PTRH2Q9Y3E5 179 aaKnown RBP15.42■□□□□ 0.06
ERCC2-201ENST00000391941 NCKAP5O14513 1909 aa15.41■□□□□ 0.06
ERCC2-201ENST00000391941 OR5H1A6NKK0 313 aa15.41■□□□□ 0.06
ERCC2-201ENST00000391941 SYNGR1O43759 233 aa15.41■□□□□ 0.06
ERCC2-201ENST00000391941 LILRA1O75019 489 aa15.41■□□□□ 0.06
ERCC2-201ENST00000391941 CNOT4O95628 575 aaKnown RBP15.41■□□□□ 0.06
ERCC2-201ENST00000391941 PCOLCEQ15113 449 aa15.41■□□□□ 0.06
ERCC2-201ENST00000391941 NMSQ5H8A3 153 aa15.41■□□□□ 0.06
ERCC2-201ENST00000391941 TMEM211Q6ICI0 200 aa15.41■□□□□ 0.06
ERCC2-201ENST00000391941 PACRGQ96M98 296 aaPredicted RBP15.41■□□□□ 0.06
ERCC2-201ENST00000391941 SLC25A31Q9H0C2 315 aa15.41■□□□□ 0.06
ERCC2-201ENST00000391941 AURKAIP1Q9NWT8 199 aaPredicted RBP15.41■□□□□ 0.06
ERCC2-201ENST00000391941 C19orf25Q9UFG5 118 aaPredicted RBP15.41■□□□□ 0.06
ERCC2-201ENST00000391941 DNAJC13O75165 2243 aa15.41■□□□□ 0.06
ERCC2-201ENST00000391941 GATCO43716 136 aaKnown RBP15.41■□□□□ 0.06
ERCC2-201ENST00000391941 TK1P04183 234 aa15.41■□□□□ 0.06
ERCC2-201ENST00000391941 SRYQ05066 204 aa15.41■□□□□ 0.06
ERCC2-201ENST00000391941 RAB30Q15771 203 aa15.41■□□□□ 0.06
ERCC2-201ENST00000391941 ZNF506Q5JVG8 444 aa15.41■□□□□ 0.06
ERCC2-201ENST00000391941 AAED1Q7RTV5 226 aa15.41■□□□□ 0.06
ERCC2-201ENST00000391941 SNIP1Q8TAD8 396 aaKnown RBP15.41■□□□□ 0.06
ERCC2-201ENST00000391941 GATAD1Q8WUU5 269 aa15.41■□□□□ 0.06
ERCC2-201ENST00000391941 TMEM56Q96MV1 263 aa15.41■□□□□ 0.06
ERCC2-201ENST00000391941 LRFN1Q9P244 771 aa15.41■□□□□ 0.06
ERCC2-201ENST00000391941 TMEM56-RWDD3S4R434 201 aa15.41■□□□□ 0.06
ERCC2-201ENST00000391941 CEBPZOSA8MTT3 80 aa15.4■□□□□ 0.06
ERCC2-201ENST00000391941 HIST1H1BP16401 226 aaKnown RBP15.4■□□□□ 0.06
ERCC2-201ENST00000391941 APLNRP35414 380 aa15.4■□□□□ 0.06
ERCC2-201ENST00000391941 TSPAN7P41732 249 aa15.4■□□□□ 0.06
ERCC2-201ENST00000391941 ERVS71-1P61550 626 aa15.4■□□□□ 0.06
ERCC2-201ENST00000391941 ZFP36L1Q07352 338 aaKnown RBP15.4■□□□□ 0.06
ERCC2-201ENST00000391941 EXT1Q16394 746 aa15.4■□□□□ 0.06
ERCC2-201ENST00000391941 WIPI1Q5MNZ9 446 aaPredicted RBP15.4■□□□□ 0.06
ERCC2-201ENST00000391941 SP5Q6BEB4 398 aaPredicted RBP15.4■□□□□ 0.06
ERCC2-201ENST00000391941 GPR146Q96CH1 333 aa15.4■□□□□ 0.06
ERCC2-201ENST00000391941 OR2H1Q9GZK4 316 aa15.4■□□□□ 0.06
ERCC2-201ENST00000391941 GAB2Q9UQC2 676 aa15.4■□□□□ 0.06
ERCC2-201ENST00000391941 A0A087WWC5 75 aa15.4■□□□□ 0.06
ERCC2-201ENST00000391941 A0A087WZY1 265 aa15.4■□□□□ 0.06
ERCC2-201ENST00000391941 BTBD17A6NE02 478 aa15.4■□□□□ 0.06
ERCC2-201ENST00000391941 YKT6O15498 198 aa15.4■□□□□ 0.06
ERCC2-201ENST00000391941 FUT6P51993 359 aa15.4■□□□□ 0.06
ERCC2-201ENST00000391941 SRPXP78539 464 aa15.4■□□□□ 0.06
ERCC2-201ENST00000391941 FOXB1Q99853 325 aa15.4■□□□□ 0.06
ERCC2-201ENST00000391941 HIST1H2BLQ99880 126 aa15.4■□□□□ 0.06
ERCC2-201ENST00000391941 ELOVL1Q9BW60 279 aa15.4■□□□□ 0.06
ERCC2-201ENST00000391941 PLK3Q9H4B4 646 aa15.4■□□□□ 0.06
ERCC2-201ENST00000391941 OR1A1Q9P1Q5 309 aa15.4■□□□□ 0.06
ERCC2-201ENST00000391941 RNF115Q9Y4L5 304 aa15.4■□□□□ 0.06
ERCC2-201ENST00000391941 ZNF732B4DXR9 585 aa15.39■□□□□ 0.05
ERCC2-201ENST00000391941 CCL4P13236 92 aa15.39■□□□□ 0.05
ERCC2-201ENST00000391941 SELLP14151 372 aa15.39■□□□□ 0.05
ERCC2-201ENST00000391941 ZNF787Q6DD87 383 aa15.39■□□□□ 0.05
ERCC2-201ENST00000391941 SSX9Q7RTT3 188 aa15.39■□□□□ 0.05
ERCC2-201ENST00000391941 OR8G5Q8NG78 346 aa15.39■□□□□ 0.05
ERCC2-201ENST00000391941 MTCH1Q9NZJ7 389 aa15.39■□□□□ 0.05
ERCC2-201ENST00000391941 PPP1R3CQ9UQK1 317 aa15.39■□□□□ 0.05
ERCC2-201ENST00000391941 A0A087X0M5 115 aa15.39■□□□□ 0.05
ERCC2-201ENST00000391941 LOC102723971A0A1B0GUV8 181 aa15.39■□□□□ 0.05
ERCC2-201ENST00000391941 A0A1B0GX30 115 aa15.39■□□□□ 0.05
ERCC2-201ENST00000391941 OR6C6A6NF89 314 aa15.39■□□□□ 0.05
ERCC2-201ENST00000391941 HSPB1P04792 205 aaKnown RBP15.39■□□□□ 0.05
ERCC2-201ENST00000391941 ID3Q02535 119 aa15.39■□□□□ 0.05
ERCC2-201ENST00000391941 CLN3Q13286 438 aa15.39■□□□□ 0.05
ERCC2-201ENST00000391941 TESK1Q15569 626 aa15.39■□□□□ 0.05
ERCC2-201ENST00000391941 ADIRFQ15847 76 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms