RNA–Protein interactions for RNA: ENST00000390993.1

SNORD28B-201, Transcript of small nucleolar RNA, C/D box 28B, humanhuman

BASIC

Gene SNORD28B, Length 75 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28B-201ENST00000390993 ERLIN1O75477 346 aa0.13□□□□□ -2.39
SNORD28B-201ENST00000390993 TRAPPC6AO75865 159 aa0.13□□□□□ -2.39
SNORD28B-201ENST00000390993 MYO1DO94832 1006 aa0.13□□□□□ -2.39
SNORD28B-201ENST00000390993 CA2P00918 260 aa0.13□□□□□ -2.39
SNORD28B-201ENST00000390993 CRPP02741 224 aa0.13□□□□□ -2.39
SNORD28B-201ENST00000390993 KLK1P06870 262 aa0.13□□□□□ -2.39
SNORD28B-201ENST00000390993 SLC25A16P16260 332 aa0.13□□□□□ -2.39
SNORD28B-201ENST00000390993 CPN2P22792 545 aa0.13□□□□□ -2.39
SNORD28B-201ENST00000390993 AKR1C3P42330 323 aa0.13□□□□□ -2.39
SNORD28B-201ENST00000390993 RPL14P50914 215 aaKnown RBP0.13□□□□□ -2.39
SNORD28B-201ENST00000390993 DSTNP60981 165 aa0.13□□□□□ -2.39
SNORD28B-201ENST00000390993 TMEM258P61165 79 aa0.13□□□□□ -2.39
SNORD28B-201ENST00000390993 PSMC5P62195 406 aa0.13□□□□□ -2.39
SNORD28B-201ENST00000390993 RPL31P62899 125 aaKnown RBP0.13□□□□□ -2.39
SNORD28B-201ENST00000390993 NNATQ16517 81 aa0.13□□□□□ -2.39
SNORD28B-201ENST00000390993 MAPK14Q16539 360 aa0.13□□□□□ -2.39
SNORD28B-201ENST00000390993 DUPD1Q68J44 220 aa0.13□□□□□ -2.39
SNORD28B-201ENST00000390993 SSX7Q7RTT5 188 aa0.13□□□□□ -2.39
SNORD28B-201ENST00000390993 CTAGE6Q86UF2 777 aa0.13□□□□□ -2.39
SNORD28B-201ENST00000390993 CA13Q8N1Q1 262 aa0.13□□□□□ -2.39
SNORD28B-201ENST00000390993 COMMD1Q8N668 190 aa0.13□□□□□ -2.39
SNORD28B-201ENST00000390993 GPATCH11Q8N954 259 aa0.13□□□□□ -2.39
SNORD28B-201ENST00000390993 OR52K1Q8NGK4 314 aa0.13□□□□□ -2.39
SNORD28B-201ENST00000390993 OR5J2Q8NH18 312 aa0.13□□□□□ -2.39
SNORD28B-201ENST00000390993 OR8D1Q8WZ84 308 aa0.13□□□□□ -2.39
SNORD28B-201ENST00000390993 NAT6Q93015 286 aa0.13□□□□□ -2.39
SNORD28B-201ENST00000390993 FMC1Q96HJ9 113 aa0.13□□□□□ -2.39
SNORD28B-201ENST00000390993 ZNF514Q96K75 400 aaPredicted RBP0.13□□□□□ -2.39
SNORD28B-201ENST00000390993 VAT1Q99536 393 aa0.13□□□□□ -2.39
SNORD28B-201ENST00000390993 EBNA1BP2Q99848 306 aaKnown RBP0.13□□□□□ -2.39
SNORD28B-201ENST00000390993 C20orf144Q9BQM9 153 aa0.13□□□□□ -2.39
SNORD28B-201ENST00000390993 AUNIPQ9H7T9 357 aa0.13□□□□□ -2.39
SNORD28B-201ENST00000390993 LYRM4Q9HD34 91 aa0.13□□□□□ -2.39
SNORD28B-201ENST00000390993 IFNKQ9P0W0 207 aa0.13□□□□□ -2.39
SNORD28B-201ENST00000390993 PRO2289Q9P1D8 64 aa0.13□□□□□ -2.39
SNORD28B-201ENST00000390993 HPCAL4Q9UM19 191 aa0.13□□□□□ -2.39
SNORD28B-201ENST00000390993 SCML1Q9UN30 329 aa0.13□□□□□ -2.39
SNORD28B-201ENST00000390993 POMPQ9Y244 141 aa0.13□□□□□ -2.39
SNORD28B-201ENST00000390993 AQRO60306 1485 aaKnown RBP eCLIP0.13□□□□□ -2.39
SNORD28B-201ENST00000390993 INSRP06213 1382 aa0.12□□□□□ -2.39
SNORD28B-201ENST00000390993 IGKV1D-42A0A075B6H8 117 aa0.12□□□□□ -2.39
SNORD28B-201ENST00000390993 RBFOX3A6NFN3 312 aa0.12□□□□□ -2.39
SNORD28B-201ENST00000390993 CCDC169A6NNP5 214 aa0.12□□□□□ -2.39
SNORD28B-201ENST00000390993 H3BP45 60 aa0.12□□□□□ -2.39
SNORD28B-201ENST00000390993 GNRH2O43555 120 aa0.12□□□□□ -2.39
SNORD28B-201ENST00000390993 SOD1P00441 154 aa0.12□□□□□ -2.39
SNORD28B-201ENST00000390993 NPPAP01160 153 aa0.12□□□□□ -2.39
SNORD28B-201ENST00000390993 UCHL1P09936 223 aa0.12□□□□□ -2.39
SNORD28B-201ENST00000390993 ATP6V0CP27449 155 aa0.12□□□□□ -2.39
SNORD28B-201ENST00000390993 DNASE1L1P49184 302 aa0.12□□□□□ -2.39
SNORD28B-201ENST00000390993 TTPAP49638 278 aa0.12□□□□□ -2.39
SNORD28B-201ENST00000390993 SLC35A2P78381 396 aa0.12□□□□□ -2.39
SNORD28B-201ENST00000390993 HOXC5Q00444 222 aa0.12□□□□□ -2.39
SNORD28B-201ENST00000390993 SLC38A11Q08AI6 406 aa0.12□□□□□ -2.39
SNORD28B-201ENST00000390993 IFFO1Q0D2I5 559 aa0.12□□□□□ -2.39
SNORD28B-201ENST00000390993 XRCC4Q13426 336 aa0.12□□□□□ -2.39
SNORD28B-201ENST00000390993 PDK2Q15119 407 aa0.12□□□□□ -2.39
SNORD28B-201ENST00000390993 TPRXLQ17RH7 258 aa0.12□□□□□ -2.39
SNORD28B-201ENST00000390993 TMEM42Q69YG0 159 aa0.12□□□□□ -2.39
SNORD28B-201ENST00000390993 EPGNQ6UW88 154 aa0.12□□□□□ -2.39
SNORD28B-201ENST00000390993 SLC35D2Q76EJ3 337 aa0.12□□□□□ -2.39
SNORD28B-201ENST00000390993 MARCH3Q86UD3 253 aa0.12□□□□□ -2.39
SNORD28B-201ENST00000390993 LHFPL1Q86WI0 220 aa0.12□□□□□ -2.39
SNORD28B-201ENST00000390993 LRRC28Q86X40 367 aaPredicted RBP0.12□□□□□ -2.39
SNORD28B-201ENST00000390993 GID4Q8IVV7 300 aa0.12□□□□□ -2.39
SNORD28B-201ENST00000390993 ZBTB8OSQ8IWT0 167 aa0.12□□□□□ -2.39
SNORD28B-201ENST00000390993 DRAXINQ8NBI3 349 aaPredicted RBP0.12□□□□□ -2.39
SNORD28B-201ENST00000390993 CCDC148Q8NFR7 591 aa0.12□□□□□ -2.39
SNORD28B-201ENST00000390993 OR11H1Q8NG94 326 aa0.12□□□□□ -2.39
SNORD28B-201ENST00000390993 OR51A7Q8NH64 312 aa0.12□□□□□ -2.39
SNORD28B-201ENST00000390993 CCL17Q92583 94 aa0.12□□□□□ -2.39
SNORD28B-201ENST00000390993 GALMQ96C23 342 aa0.12□□□□□ -2.39
SNORD28B-201ENST00000390993 SLC35G5Q96KT7 338 aa0.12□□□□□ -2.39
SNORD28B-201ENST00000390993 DOHHQ9BU89 302 aa0.12□□□□□ -2.39
SNORD28B-201ENST00000390993 CDCA4Q9BXL8 241 aa0.12□□□□□ -2.39
SNORD28B-201ENST00000390993 POTEKPQ9BYX7 375 aa0.12□□□□□ -2.39
SNORD28B-201ENST00000390993 CHST5Q9GZS9 411 aa0.12□□□□□ -2.39
SNORD28B-201ENST00000390993 NXF2Q9GZY0 626 aaKnown RBP0.12□□□□□ -2.39
SNORD28B-201ENST00000390993 POMKQ9H5K3 350 aa0.12□□□□□ -2.39
SNORD28B-201ENST00000390993 HAUS4Q9H6D7 363 aa0.12□□□□□ -2.39
SNORD28B-201ENST00000390993 EXO5Q9H790 373 aa0.12□□□□□ -2.39
SNORD28B-201ENST00000390993 CHRAC1Q9NRG0 131 aa0.12□□□□□ -2.39
SNORD28B-201ENST00000390993 RBM12B-AS1Q9P1G2 102 aa0.12□□□□□ -2.39
SNORD28B-201ENST00000390993 SNURFQ9Y675 71 aa0.12□□□□□ -2.39
SNORD28B-201ENST00000390993 DLG5Q8TDM6 1919 aa0.12□□□□□ -2.39
SNORD28B-201ENST00000390993 ATRNO75882 1429 aa0.12□□□□□ -2.39
SNORD28B-201ENST00000390993 ZNF532Q9HCE3 1301 aa0.12□□□□□ -2.39
SNORD28B-201ENST00000390993 TECTAO75443 2155 aa0.11□□□□□ -2.39
SNORD28B-201ENST00000390993 INTS1Q8N201 2190 aaKnown RBP0.11□□□□□ -2.39
SNORD28B-201ENST00000390993 TRPM3Q9HCF6 1732 aaPredicted RBP0.11□□□□□ -2.39
SNORD28B-201ENST00000390993 TRAV8-7A0A075B6U6 113 aa0.11□□□□□ -2.39
SNORD28B-201ENST00000390993 MDFIC2A0A1B0GVS7 189 aa0.11□□□□□ -2.39
SNORD28B-201ENST00000390993 ANKRD20A5PA0PJZ0 165 aa0.11□□□□□ -2.39
SNORD28B-201ENST00000390993 C11orf86A6NJI1 115 aa0.11□□□□□ -2.39
SNORD28B-201ENST00000390993 A8MUN3 132 aa0.11□□□□□ -2.39
SNORD28B-201ENST00000390993 B4DEV8 164 aa0.11□□□□□ -2.39
SNORD28B-201ENST00000390993 PHGR1C9JFL3 82 aa0.11□□□□□ -2.39
SNORD28B-201ENST00000390993 GOLGA8TH3BQL2 631 aa0.11□□□□□ -2.39
SNORD28B-201ENST00000390993 BOLA2-SMG1P6H3BVE0 249 aa0.11□□□□□ -2.39
SNORD28B-201ENST00000390993 UBDO15205 165 aa0.11□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 243.4 ms