RNA–Protein interactions for RNA: ENST00000390009.7

ACTN4-202, Transcript of actinin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ACTN4, Length 2,102 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-202ENST00000390009 MSGN1A6NI15 193 aa15.36■□□□□ 0.05
ACTN4-202ENST00000390009 C1QTNF9BB2RNN3 333 aa15.36■□□□□ 0.05
ACTN4-202ENST00000390009 NUP62P37198 522 aaPredicted RBP15.36■□□□□ 0.05
ACTN4-202ENST00000390009 FAM27E3Q08E93 113 aa15.36■□□□□ 0.05
ACTN4-202ENST00000390009 TBC1D26Q86UD7 250 aa15.36■□□□□ 0.05
ACTN4-202ENST00000390009 SREK1IP1Q8N9Q2 155 aaPredicted RBP15.36■□□□□ 0.05
ACTN4-202ENST00000390009 LHFPL5Q8TAF8 219 aa15.36■□□□□ 0.05
ACTN4-202ENST00000390009 CNTNAP3BQ96NU0 1288 aa15.36■□□□□ 0.05
ACTN4-202ENST00000390009 CNTNAP3Q9BZ76 1288 aa15.36■□□□□ 0.05
ACTN4-202ENST00000390009 TRAPPC2LQ9UL33 140 aa15.36■□□□□ 0.05
ACTN4-202ENST00000390009 PIEZO2Q9H5I5 2752 aa15.36■□□□□ 0.05
ACTN4-202ENST00000390009 ZNF250P15622 560 aa15.35■□□□□ 0.05
ACTN4-202ENST00000390009 HOXA4Q00056 320 aaPredicted RBP15.35■□□□□ 0.05
ACTN4-202ENST00000390009 TAGLNQ01995 201 aaKnown RBP15.35■□□□□ 0.05
ACTN4-202ENST00000390009 KIAA2026Q5HYC2 2103 aa15.35■□□□□ 0.05
ACTN4-202ENST00000390009 H1FOOQ8IZA3 346 aaPredicted RBP15.35■□□□□ 0.05
ACTN4-202ENST00000390009 IL1F10Q8WWZ1 152 aa15.35■□□□□ 0.05
ACTN4-202ENST00000390009 AQP10Q96PS8 301 aa15.35■□□□□ 0.05
ACTN4-202ENST00000390009 CCL28Q9NRJ3 127 aa15.35■□□□□ 0.05
ACTN4-202ENST00000390009 TAAR3PQ9P1P4 343 aa15.35■□□□□ 0.05
ACTN4-202ENST00000390009 DUSP13Q9UII6 198 aa15.35■□□□□ 0.05
ACTN4-202ENST00000390009 FBXO9Q9UK97 447 aaPredicted RBP15.35■□□□□ 0.05
ACTN4-202ENST00000390009 HSD17B6O14756 317 aa15.35■□□□□ 0.05
ACTN4-202ENST00000390009 MEX3BQ6ZN04 569 aaKnown RBP15.35■□□□□ 0.05
ACTN4-202ENST00000390009 ACP7Q6ZNF0 438 aa15.35■□□□□ 0.05
ACTN4-202ENST00000390009 LRP11Q86VZ4 500 aa15.35■□□□□ 0.05
ACTN4-202ENST00000390009 CXorf58Q96LI9 332 aa15.35■□□□□ 0.05
ACTN4-202ENST00000390009 TMEM222Q9H0R3 208 aa15.35■□□□□ 0.05
ACTN4-202ENST00000390009 DNAJB11Q9UBS4 358 aa15.35■□□□□ 0.05
ACTN4-202ENST00000390009 GLS2Q9UI32 602 aa15.35■□□□□ 0.05
ACTN4-202ENST00000390009 OR2W1Q9Y3N9 320 aa15.35■□□□□ 0.05
ACTN4-202ENST00000390009 PTPRQQ9UMZ3 2332 aa15.35■□□□□ 0.05
ACTN4-202ENST00000390009 A0A0G2JNJ9 132 aa15.34■□□□□ 0.05
ACTN4-202ENST00000390009 hCG_1807616A0A1W2PRN6 198 aa15.34■□□□□ 0.05
ACTN4-202ENST00000390009 PSPNO60542 156 aa15.34■□□□□ 0.05
ACTN4-202ENST00000390009 GFRALQ6UXV0 394 aa15.34■□□□□ 0.05
ACTN4-202ENST00000390009 RELL2Q8NC24 303 aaPredicted RBP15.34■□□□□ 0.05
ACTN4-202ENST00000390009 OR2Z1Q8NG97 314 aa15.34■□□□□ 0.05
ACTN4-202ENST00000390009 Q9UFV3 132 aa15.34■□□□□ 0.05
ACTN4-202ENST00000390009 NPIPB11E5RHQ5 1161 aa15.34■□□□□ 0.05
ACTN4-202ENST00000390009 LMO1P25800 156 aa15.34■□□□□ 0.05
ACTN4-202ENST00000390009 GLRXP35754 106 aa15.34■□□□□ 0.05
ACTN4-202ENST00000390009 NKX6-1P78426 367 aaPredicted RBP15.34■□□□□ 0.05
ACTN4-202ENST00000390009 SRPXP78539 464 aa15.34■□□□□ 0.05
ACTN4-202ENST00000390009 MZT1Q08AG7 82 aa15.34■□□□□ 0.05
ACTN4-202ENST00000390009 TMEM268Q5VZI3 342 aa15.34■□□□□ 0.05
ACTN4-202ENST00000390009 PRR18Q8N4B5 295 aa15.34■□□□□ 0.05
ACTN4-202ENST00000390009 SLC35G3Q8N808 338 aa15.34■□□□□ 0.05
ACTN4-202ENST00000390009 PHYHIPLQ96FC7 376 aa15.34■□□□□ 0.05
ACTN4-202ENST00000390009 DMRTA2Q96SC8 542 aa15.34■□□□□ 0.05
ACTN4-202ENST00000390009 GPHA2Q96T91 129 aa15.34■□□□□ 0.05
ACTN4-202ENST00000390009 MBNL3Q9NUK0 354 aaKnown RBP15.34■□□□□ 0.05
ACTN4-202ENST00000390009 COQ3Q9NZJ6 369 aa15.34■□□□□ 0.05
ACTN4-202ENST00000390009 OR1A1Q9P1Q5 309 aa15.34■□□□□ 0.05
ACTN4-202ENST00000390009 UBE2J1Q9Y385 318 aaPredicted RBP15.34■□□□□ 0.05
ACTN4-202ENST00000390009 WIPI2Q9Y4P8 454 aa15.34■□□□□ 0.05
ACTN4-202ENST00000390009 DEDDO75618 318 aa15.33■□□□□ 0.04
ACTN4-202ENST00000390009 SCGB1D2O95969 90 aa15.33■□□□□ 0.04
ACTN4-202ENST00000390009 SMCO1Q147U7 214 aa15.33■□□□□ 0.04
ACTN4-202ENST00000390009 AANATQ16613 207 aa15.33■□□□□ 0.04
ACTN4-202ENST00000390009 PXDC1Q5TGL8 231 aa15.33■□□□□ 0.04
ACTN4-202ENST00000390009 C22orf34Q6ZV56 151 aa15.33■□□□□ 0.04
ACTN4-202ENST00000390009 CMTM1Q8IZ96 169 aa15.33■□□□□ 0.04
ACTN4-202ENST00000390009 PIGMQ9H3S5 423 aa15.33■□□□□ 0.04
ACTN4-202ENST00000390009 TMED3Q9Y3Q3 217 aa15.33■□□□□ 0.04
ACTN4-202ENST00000390009 LSM5Q9Y4Y9 91 aaKnown RBP15.33■□□□□ 0.04
ACTN4-202ENST00000390009 IGHV3-13P01766 116 aa15.32■□□□□ 0.04
ACTN4-202ENST00000390009 FAM74A1Q5RGS3 127 aa15.32■□□□□ 0.04
ACTN4-202ENST00000390009 MRGPRGQ86SM5 289 aa15.32■□□□□ 0.04
ACTN4-202ENST00000390009 IQCF2Q8IXL9 164 aa15.32■□□□□ 0.04
ACTN4-202ENST00000390009 PDZD9Q8IXQ8 264 aa15.32■□□□□ 0.04
ACTN4-202ENST00000390009 STOML3Q8TAV4 291 aa15.32■□□□□ 0.04
ACTN4-202ENST00000390009 SNRNP40Q96DI7 357 aaKnown RBP15.32■□□□□ 0.04
ACTN4-202ENST00000390009 SLC25A32Q9H2D1 315 aa15.32■□□□□ 0.04
ACTN4-202ENST00000390009 ERRFI1Q9UJM3 462 aaPredicted RBP15.32■□□□□ 0.04
ACTN4-202ENST00000390009 PTBP3O95758 552 aaKnown RBP15.32■□□□□ 0.04
ACTN4-202ENST00000390009 MBPP02686 304 aaPredicted RBP15.32■□□□□ 0.04
ACTN4-202ENST00000390009 KLF3P57682 345 aaPredicted RBP15.32■□□□□ 0.04
ACTN4-202ENST00000390009 SMIM21Q3B7S5 101 aa15.32■□□□□ 0.04
ACTN4-202ENST00000390009 VHLLQ6RSH7 139 aa15.32■□□□□ 0.04
ACTN4-202ENST00000390009 TMEM56Q96MV1 263 aa15.32■□□□□ 0.04
ACTN4-202ENST00000390009 USB1Q9BQ65 265 aaKnown RBP15.32■□□□□ 0.04
ACTN4-202ENST00000390009 SHARPINQ9H0F6 387 aa15.32■□□□□ 0.04
ACTN4-202ENST00000390009 CYTL1Q9NRR1 136 aa15.32■□□□□ 0.04
ACTN4-202ENST00000390009 MED9Q9NWA0 146 aa15.32■□□□□ 0.04
ACTN4-202ENST00000390009 SH3BGRL2Q9UJC5 107 aa15.32■□□□□ 0.04
ACTN4-202ENST00000390009 TMEM56-RWDD3S4R434 201 aa15.32■□□□□ 0.04
ACTN4-202ENST00000390009 ATP6V1G2-DDX39BF2Z307 99 aa15.31■□□□□ 0.04
ACTN4-202ENST00000390009 HKR1P10072 659 aa15.31■□□□□ 0.04
ACTN4-202ENST00000390009 CCKARP32238 428 aa15.31■□□□□ 0.04
ACTN4-202ENST00000390009 CD200P41217 278 aa15.31■□□□□ 0.04
ACTN4-202ENST00000390009 HMGN3Q15651 99 aa15.31■□□□□ 0.04
ACTN4-202ENST00000390009 PRR30Q53SZ7 412 aaPredicted RBP15.31■□□□□ 0.04
ACTN4-202ENST00000390009 OR52M1Q8NGK5 317 aa15.31■□□□□ 0.04
ACTN4-202ENST00000390009 UBALD1Q8TB05 177 aa15.31■□□□□ 0.04
ACTN4-202ENST00000390009 PRR7Q8TB68 274 aa15.31■□□□□ 0.04
ACTN4-202ENST00000390009 LRRC29Q8WV35 223 aa15.31■□□□□ 0.04
ACTN4-202ENST00000390009 TAF9BQ9HBM6 251 aa15.31■□□□□ 0.04
ACTN4-202ENST00000390009 TMEM30CPA0ZSE6 113 aa15.31■□□□□ 0.04
ACTN4-202ENST00000390009 TNFSF12O43508 249 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms