RNA–Protein interactions for RNA: ENST00000381342.6

SNRPB-201, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SNRPB, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-201ENST00000381342 C9orf139Q6ZV77 190 aa13.19□□□□□ -0.3
SNRPB-201ENST00000381342 PIP4P2Q8N4L2 257 aa13.19□□□□□ -0.3
SNRPB-201ENST00000381342 OR4K15Q8NH41 348 aa13.19□□□□□ -0.3
SNRPB-201ENST00000381342 FAAP24Q9BTP7 215 aa13.19□□□□□ -0.3
SNRPB-201ENST00000381342 NCOR1P1Q9H4R4 102 aa13.19□□□□□ -0.3
SNRPB-201ENST00000381342 ZMAT3Q9HA38 289 aaKnown RBP13.19□□□□□ -0.3
SNRPB-201ENST00000381342 SESN1Q9Y6P5 492 aa13.19□□□□□ -0.3
SNRPB-201ENST00000381342 FAM172BPA6NC97 362 aa13.18□□□□□ -0.3
SNRPB-201ENST00000381342 H3BUI4 141 aa13.18□□□□□ -0.3
SNRPB-201ENST00000381342 NPFFO15130 113 aa13.18□□□□□ -0.3
SNRPB-201ENST00000381342 MT-ND4P03905 459 aa13.18□□□□□ -0.3
SNRPB-201ENST00000381342 CGB3P0DN86 165 aa13.18□□□□□ -0.3
SNRPB-201ENST00000381342 CGB7P0DN87 165 aa13.18□□□□□ -0.3
SNRPB-201ENST00000381342 SAA4P35542 130 aa13.18□□□□□ -0.3
SNRPB-201ENST00000381342 UBE2E1P51965 193 aa13.18□□□□□ -0.3
SNRPB-201ENST00000381342 HEPN1Q6WQI6 88 aa13.18□□□□□ -0.3
SNRPB-201ENST00000381342 OR56B1Q8NGI3 324 aa13.18□□□□□ -0.3
SNRPB-201ENST00000381342 UBALD1Q8TB05 177 aa13.18□□□□□ -0.3
SNRPB-201ENST00000381342 ZDHHC16Q969W1 377 aa13.18□□□□□ -0.3
SNRPB-201ENST00000381342 ARHGAP5-AS1Q96IT6 56 aa13.18□□□□□ -0.3
SNRPB-201ENST00000381342 ZNF48Q96MX3 618 aaPredicted RBP13.18□□□□□ -0.3
SNRPB-201ENST00000381342 HEXA-AS1Q9H8Q6 139 aa13.18□□□□□ -0.3
SNRPB-201ENST00000381342 PLEKHJ1Q9NW61 149 aa13.18□□□□□ -0.3
SNRPB-201ENST00000381342 NDUFA13Q9P0J0 144 aa13.18□□□□□ -0.3
SNRPB-201ENST00000381342 A0A0U1RQK1 487 aa13.17□□□□□ -0.3
SNRPB-201ENST00000381342 KBTBD11-OT1A0A1B0GTJ5 212 aa13.17□□□□□ -0.3
SNRPB-201ENST00000381342 SMIM31A0A1B0GVY4 71 aa13.17□□□□□ -0.3
SNRPB-201ENST00000381342 A6NHS1 94 aa13.17□□□□□ -0.3
SNRPB-201ENST00000381342 TMEM50BP56557 158 aa13.17□□□□□ -0.3
SNRPB-201ENST00000381342 UBA52P62987 128 aaKnown RBP13.17□□□□□ -0.3
SNRPB-201ENST00000381342 LTC4SQ16873 150 aa13.17□□□□□ -0.3
SNRPB-201ENST00000381342 DEFB112Q30KQ8 113 aa13.17□□□□□ -0.3
SNRPB-201ENST00000381342 PLAC9Q5JTB6 97 aa13.17□□□□□ -0.3
SNRPB-201ENST00000381342 CLVS1Q8IUQ0 354 aaPredicted RBP13.17□□□□□ -0.3
SNRPB-201ENST00000381342 GAPTQ8N292 157 aa13.17□□□□□ -0.3
SNRPB-201ENST00000381342 ZDHHC22Q8N966 263 aa13.17□□□□□ -0.3
SNRPB-201ENST00000381342 ZNF565Q8N9K5 539 aa13.17□□□□□ -0.3
SNRPB-201ENST00000381342 OR5H6Q8NGV6 325 aa13.17□□□□□ -0.3
SNRPB-201ENST00000381342 NDNFQ8TB73 568 aa13.17□□□□□ -0.3
SNRPB-201ENST00000381342 MRPL30Q8TCC3 161 aaKnown RBP13.17□□□□□ -0.3
SNRPB-201ENST00000381342 PTX4Q96A99 478 aa13.17□□□□□ -0.3
SNRPB-201ENST00000381342 PECRQ9BY49 303 aa13.17□□□□□ -0.3
SNRPB-201ENST00000381342 ATG5Q9H1Y0 275 aa13.17□□□□□ -0.3
SNRPB-201ENST00000381342 AK3Q9UIJ7 227 aa13.17□□□□□ -0.3
SNRPB-201ENST00000381342 TRAPPC2LQ9UL33 140 aa13.17□□□□□ -0.3
SNRPB-201ENST00000381342 DPPA5A6NC42 116 aa13.16□□□□□ -0.3
SNRPB-201ENST00000381342 CA11O75493 328 aa13.16□□□□□ -0.3
SNRPB-201ENST00000381342 NFYBP25208 207 aa13.16□□□□□ -0.3
SNRPB-201ENST00000381342 TUSC1Q2TAM9 212 aa13.16□□□□□ -0.3
SNRPB-201ENST00000381342 UTF1Q5T230 341 aa13.16□□□□□ -0.3
SNRPB-201ENST00000381342 OLFML2AQ68BL7 652 aa13.16□□□□□ -0.3
SNRPB-201ENST00000381342 OR13D1Q8NGV5 346 aa13.16□□□□□ -0.3
SNRPB-201ENST00000381342 OR10R2Q8NGX6 335 aa13.16□□□□□ -0.3
SNRPB-201ENST00000381342 RFESDQ8TAC1 157 aa13.16□□□□□ -0.3
SNRPB-201ENST00000381342 SLC25A46Q96AG3 418 aa13.16□□□□□ -0.3
SNRPB-201ENST00000381342 SLC25A38Q96DW6 304 aa13.16□□□□□ -0.3
SNRPB-201ENST00000381342 KIRREL1Q96J84 757 aa13.16□□□□□ -0.3
SNRPB-201ENST00000381342 HDHD3Q9BSH5 251 aaPredicted RBP13.16□□□□□ -0.3
SNRPB-201ENST00000381342 TMEM133Q9H2Q1 129 aa13.16□□□□□ -0.3
SNRPB-201ENST00000381342 IDI2-AS1Q9NZ38 188 aa13.16□□□□□ -0.3
SNRPB-201ENST00000381342 HSF4Q9ULV5 492 aa13.16□□□□□ -0.3
SNRPB-201ENST00000381342 A0A075B6Q4 140 aa13.15□□□□□ -0.3
SNRPB-201ENST00000381342 IGHV2-26A0A0B4J1V2 119 aa13.15□□□□□ -0.3
SNRPB-201ENST00000381342 MEIOCA2RUB1 952 aa13.15□□□□□ -0.3
SNRPB-201ENST00000381342 TMEM89A2RUT3 159 aa13.15□□□□□ -0.3
SNRPB-201ENST00000381342 ODF3BA8MYP8 253 aa13.15□□□□□ -0.3
SNRPB-201ENST00000381342 C12orf77C9JDV5 145 aa13.15□□□□□ -0.3
SNRPB-201ENST00000381342 C15orf65H3BRN8 121 aa13.15□□□□□ -0.3
SNRPB-201ENST00000381342 ARG1P05089 322 aa13.15□□□□□ -0.3
SNRPB-201ENST00000381342 RCC1P18754 421 aaPredicted RBP13.15□□□□□ -0.3
SNRPB-201ENST00000381342 DYNC1I2Q13409 638 aaKnown RBP13.15□□□□□ -0.3
SNRPB-201ENST00000381342 Q6ZPA2 131 aa13.15□□□□□ -0.3
SNRPB-201ENST00000381342 Q6ZTK2 550 aa13.15□□□□□ -0.3
SNRPB-201ENST00000381342 CROCCP3Q8IVE0 287 aa13.15□□□□□ -0.3
SNRPB-201ENST00000381342 C3orf56Q8N813 242 aa13.15□□□□□ -0.3
SNRPB-201ENST00000381342 C17orf50Q8WW18 174 aa13.15□□□□□ -0.3
SNRPB-201ENST00000381342 LEAP2Q969E1 77 aa13.15□□□□□ -0.3
SNRPB-201ENST00000381342 ARL11Q969Q4 196 aa13.15□□□□□ -0.3
SNRPB-201ENST00000381342 RAB3CQ96E17 227 aa13.15□□□□□ -0.3
SNRPB-201ENST00000381342 RBM38Q9H0Z9 239 aaKnown RBP13.15□□□□□ -0.3
SNRPB-201ENST00000381342 DCSTAMPQ9H295 470 aa13.15□□□□□ -0.3
SNRPB-201ENST00000381342 ZNF286AQ9HBT8 521 aa13.15□□□□□ -0.3
SNRPB-201ENST00000381342 CHMP1AQ9HD42 196 aaPredicted RBP13.15□□□□□ -0.3
SNRPB-201ENST00000381342 ESM1Q9NQ30 184 aa13.15□□□□□ -0.3
SNRPB-201ENST00000381342 RHBDL2Q9NX52 303 aa13.15□□□□□ -0.3
SNRPB-201ENST00000381342 ETV7Q9Y603 341 aa13.15□□□□□ -0.3
SNRPB-201ENST00000381342 METTL21EPA6NDL7 271 aa13.14□□□□□ -0.31
SNRPB-201ENST00000381342 NPIPB11E5RHQ5 1161 aa13.14□□□□□ -0.31
SNRPB-201ENST00000381342 RAB27BO00194 218 aa13.14□□□□□ -0.31
SNRPB-201ENST00000381342 NAPSAO96009 420 aa13.14□□□□□ -0.31
SNRPB-201ENST00000381342 GNB3P16520 340 aa13.14□□□□□ -0.31
SNRPB-201ENST00000381342 SCAND1P57086 179 aa13.14□□□□□ -0.31
SNRPB-201ENST00000381342 FAM189A2Q15884 450 aa13.14□□□□□ -0.31
SNRPB-201ENST00000381342 MIDNQ504T8 468 aa13.14□□□□□ -0.31
SNRPB-201ENST00000381342 C6orf183Q5T699 404 aa13.14□□□□□ -0.31
SNRPB-201ENST00000381342 ZNF626Q68DY1 528 aa13.14□□□□□ -0.31
SNRPB-201ENST00000381342 OR52W1Q6IF63 320 aa13.14□□□□□ -0.31
SNRPB-201ENST00000381342 C5orf24Q7Z6I8 188 aa13.14□□□□□ -0.31
SNRPB-201ENST00000381342 PRR18Q8N4B5 295 aa13.14□□□□□ -0.31
SNRPB-201ENST00000381342 CLEC7AQ9BXN2 247 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms