RNA–Protein interactions for RNA: ENST00000381150.5

SDC1-202, Transcript of syndecan 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SDC1, Length 3,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-202ENST00000381150 OR13D1Q8NGV5 346 aa11.94□□□□□ -0.5
SDC1-202ENST00000381150 IL1F10Q8WWZ1 152 aa11.94□□□□□ -0.5
SDC1-202ENST00000381150 TMEM18Q96B42 140 aa11.94□□□□□ -0.5
SDC1-202ENST00000381150 CCDC74BQ96LY2 380 aa11.94□□□□□ -0.5
SDC1-202ENST00000381150 RBKSQ9H477 322 aa11.94□□□□□ -0.5
SDC1-202ENST00000381150 SLC7A10Q9NS82 523 aa11.94□□□□□ -0.5
SDC1-202ENST00000381150 MYOTQ9UBF9 498 aa11.94□□□□□ -0.5
SDC1-202ENST00000381150 RARRES3Q9UL19 164 aa11.94□□□□□ -0.5
SDC1-202ENST00000381150 CHD3Q12873 2000 aaKnown RBP11.94□□□□□ -0.5
SDC1-202ENST00000381150 DOCK11Q5JSL3 2073 aa11.94□□□□□ -0.5
SDC1-202ENST00000381150 M0R135 149 aa11.94□□□□□ -0.5
SDC1-202ENST00000381150 CST2P09228 141 aa11.94□□□□□ -0.5
SDC1-202ENST00000381150 EDN3P14138 238 aa11.94□□□□□ -0.5
SDC1-202ENST00000381150 PLPPR5Q32ZL2 321 aa11.94□□□□□ -0.5
SDC1-202ENST00000381150 SNAI3Q3KNW1 292 aa11.94□□□□□ -0.5
SDC1-202ENST00000381150 DMRTA1Q5VZB9 504 aa11.94□□□□□ -0.5
SDC1-202ENST00000381150 LYSMD4Q5XG99 296 aa11.94□□□□□ -0.5
SDC1-202ENST00000381150 FAM89BQ8N5H3 189 aa11.94□□□□□ -0.5
SDC1-202ENST00000381150 RAB24Q969Q5 203 aa11.94□□□□□ -0.5
SDC1-202ENST00000381150 ZNF799Q96GE5 643 aa11.94□□□□□ -0.5
SDC1-202ENST00000381150 PATZ1Q9HBE1 687 aaKnown RBP11.94□□□□□ -0.5
SDC1-202ENST00000381150 FBLN5Q9UBX5 448 aa11.94□□□□□ -0.5
SDC1-202ENST00000381150 PILRBQ9UKJ0 227 aa11.94□□□□□ -0.5
SDC1-202ENST00000381150 OPN1MWP04001 364 aa11.94□□□□□ -0.5
SDC1-202ENST00000381150 OPN1MW2P0DN77 364 aa11.94□□□□□ -0.5
SDC1-202ENST00000381150 OPN1MW3P0DN78 364 aa11.94□□□□□ -0.5
SDC1-202ENST00000381150 ZNF133P52736 654 aaPredicted RBP11.94□□□□□ -0.5
SDC1-202ENST00000381150 GNB2P62879 340 aa11.94□□□□□ -0.5
SDC1-202ENST00000381150 HERPUD1Q15011 391 aa11.94□□□□□ -0.5
SDC1-202ENST00000381150 MRPL14Q6P1L8 145 aaKnown RBP11.94□□□□□ -0.5
SDC1-202ENST00000381150 ZNF100Q8IYN0 542 aa11.94□□□□□ -0.5
SDC1-202ENST00000381150 GAPTQ8N292 157 aa11.94□□□□□ -0.5
SDC1-202ENST00000381150 OR5R1Q8NH85 324 aa11.94□□□□□ -0.5
SDC1-202ENST00000381150 LHX4Q969G2 390 aa11.94□□□□□ -0.5
SDC1-202ENST00000381150 NUDT16L1Q9BRJ7 211 aaKnown RBP11.94□□□□□ -0.5
SDC1-202ENST00000381150 MRPL13Q9BYD1 178 aaKnown RBP11.94□□□□□ -0.5
SDC1-202ENST00000381150 MOB1AQ9H8S9 216 aa11.94□□□□□ -0.5
SDC1-202ENST00000381150 EML6Q6ZMW3 1958 aa11.94□□□□□ -0.5
SDC1-202ENST00000381150 A0A1B0GU03 582 aa11.93□□□□□ -0.5
SDC1-202ENST00000381150 A0A1W2PNV4 684 aa11.93□□□□□ -0.5
SDC1-202ENST00000381150 DVL1O14640 695 aa11.93□□□□□ -0.5
SDC1-202ENST00000381150 GALR2O43603 387 aaPredicted RBP11.93□□□□□ -0.5
SDC1-202ENST00000381150 GDF9O60383 454 aa11.93□□□□□ -0.5
SDC1-202ENST00000381150 TRAPPC6AO75865 159 aa11.93□□□□□ -0.5
SDC1-202ENST00000381150 DHRS3O75911 302 aa11.93□□□□□ -0.5
SDC1-202ENST00000381150 PPYP01298 95 aa11.93□□□□□ -0.5
SDC1-202ENST00000381150 TFPI2P48307 235 aa11.93□□□□□ -0.5
SDC1-202ENST00000381150 PMP22Q01453 160 aa11.93□□□□□ -0.5
SDC1-202ENST00000381150 MALLQ13021 153 aa11.93□□□□□ -0.5
SDC1-202ENST00000381150 HLA-BQ31612 363 aa11.93□□□□□ -0.5
SDC1-202ENST00000381150 OR10G3Q8NGC4 313 aa11.93□□□□□ -0.5
SDC1-202ENST00000381150 SPIN2AQ99865 258 aa11.93□□□□□ -0.5
SDC1-202ENST00000381150 SPIN2BQ9BPZ2 258 aa11.93□□□□□ -0.5
SDC1-202ENST00000381150 PAM16Q9Y3D7 125 aa11.93□□□□□ -0.5
SDC1-202ENST00000381150 ZNF816-ZNF321PA0A0X1KG74 233 aa11.93□□□□□ -0.5
SDC1-202ENST00000381150 PITX3O75364 302 aa11.93□□□□□ -0.5
SDC1-202ENST00000381150 BCL2P10415 239 aa11.93□□□□□ -0.5
SDC1-202ENST00000381150 EGR1P18146 543 aa11.93□□□□□ -0.5
SDC1-202ENST00000381150 MAS1LP35410 378 aa11.93□□□□□ -0.5
SDC1-202ENST00000381150 TOMM20LQ6UXN7 152 aa11.93□□□□□ -0.5
SDC1-202ENST00000381150 C18orf12Q96KH6 178 aa11.93□□□□□ -0.5
SDC1-202ENST00000381150 OCIAD1Q9NX40 245 aa11.93□□□□□ -0.5
SDC1-202ENST00000381150 FKBP11Q9NYL4 201 aa11.93□□□□□ -0.5
SDC1-202ENST00000381150 AHCTF1Q8WYP5 2266 aa11.93□□□□□ -0.5
SDC1-202ENST00000381150 LOC102723971A0A1B0GUV8 181 aa11.92□□□□□ -0.5
SDC1-202ENST00000381150 TLX3O43711 291 aaPredicted RBP11.92□□□□□ -0.5
SDC1-202ENST00000381150 FGF5P12034 268 aa11.92□□□□□ -0.5
SDC1-202ENST00000381150 HOXA6P31267 233 aa11.92□□□□□ -0.5
SDC1-202ENST00000381150 RAB4BP61018 213 aa11.92□□□□□ -0.5
SDC1-202ENST00000381150 IQCJQ1A5X6 159 aa11.92□□□□□ -0.5
SDC1-202ENST00000381150 LBHQ53QV2 105 aaPredicted RBP11.92□□□□□ -0.5
SDC1-202ENST00000381150 SPANXN5Q5MJ07 72 aa11.92□□□□□ -0.5
SDC1-202ENST00000381150 FAM90A2PQ658T7 463 aa11.92□□□□□ -0.5
SDC1-202ENST00000381150 PMS2CLQ68D20 193 aa11.92□□□□□ -0.5
SDC1-202ENST00000381150 OR5L2Q8NGL0 311 aa11.92□□□□□ -0.5
SDC1-202ENST00000381150 OR4F5Q8NH21 305 aa11.92□□□□□ -0.5
SDC1-202ENST00000381150 SGCZQ96LD1 299 aa11.92□□□□□ -0.5
SDC1-202ENST00000381150 OR4F4Q96R69 305 aa11.92□□□□□ -0.5
SDC1-202ENST00000381150 TUBG2Q9NRH3 451 aa11.92□□□□□ -0.5
SDC1-202ENST00000381150 SLC39A9Q9NUM3 307 aa11.92□□□□□ -0.5
SDC1-202ENST00000381150 PRSS50Q9UI38 385 aa11.92□□□□□ -0.5
SDC1-202ENST00000381150 ANAPC10Q9UM13 185 aa11.92□□□□□ -0.5
SDC1-202ENST00000381150 MSX1P28360 303 aa11.92□□□□□ -0.5
SDC1-202ENST00000381150 DTD1Q8TEA8 209 aa11.92□□□□□ -0.5
SDC1-202ENST00000381150 MRGPRX4Q96LA9 322 aa11.92□□□□□ -0.5
SDC1-202ENST00000381150 SLC25A22Q9H936 323 aa11.92□□□□□ -0.5
SDC1-202ENST00000381150 NCOA6Q14686 2063 aaPredicted RBP11.92□□□□□ -0.5
SDC1-202ENST00000381150 C3orf80F5H4A9 247 aa11.92□□□□□ -0.5
SDC1-202ENST00000381150 ZFAND5O76080 213 aa11.92□□□□□ -0.5
SDC1-202ENST00000381150 DEFA4P12838 97 aa11.92□□□□□ -0.5
SDC1-202ENST00000381150 OR5I1Q13606 314 aa11.92□□□□□ -0.5
SDC1-202ENST00000381150 Q96M66 194 aa11.92□□□□□ -0.5
SDC1-202ENST00000381150 TBX15Q96SF7 602 aa11.92□□□□□ -0.5
SDC1-202ENST00000381150 SMDT1Q9H4I9 107 aa11.92□□□□□ -0.5
SDC1-202ENST00000381150 CCL28Q9NRJ3 127 aa11.92□□□□□ -0.5
SDC1-202ENST00000381150 LYRM2Q9NU23 88 aaPredicted RBP11.92□□□□□ -0.5
SDC1-202ENST00000381150 ALKBH4Q9NXW9 302 aa11.92□□□□□ -0.5
SDC1-202ENST00000381150 CBY1Q9Y3M2 126 aa11.92□□□□□ -0.5
SDC1-202ENST00000381150 MUC3AQ02505 3323 aa11.92□□□□□ -0.5
SDC1-202ENST00000381150 LRRC3CA6NJW4 275 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms