RNA–Protein interactions for RNA: ENST00000378725.3

SSU72-203, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 619 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-203ENST00000378725 OR52W1Q6IF63 320 aa15.28■□□□□ 0.04
SSU72-203ENST00000378725 PRIMA1Q86XR5 153 aa15.28■□□□□ 0.04
SSU72-203ENST00000378725 PNKDQ8N490 385 aa15.28■□□□□ 0.04
SSU72-203ENST00000378725 OR11H6Q8NGC7 330 aa15.28■□□□□ 0.04
SSU72-203ENST00000378725 OR10A7Q8NGE5 316 aa15.28■□□□□ 0.04
SSU72-203ENST00000378725 OR13D1Q8NGV5 346 aa15.28■□□□□ 0.04
SSU72-203ENST00000378725 OR4K15Q8NH41 348 aa15.28■□□□□ 0.04
SSU72-203ENST00000378725 NDNFQ8TB73 568 aa15.28■□□□□ 0.04
SSU72-203ENST00000378725 RAB2BQ8WUD1 216 aa15.28■□□□□ 0.04
SSU72-203ENST00000378725 KCTD12Q96CX2 325 aaKnown RBP15.28■□□□□ 0.04
SSU72-203ENST00000378725 RAB3CQ96E17 227 aa15.28■□□□□ 0.04
SSU72-203ENST00000378725 SLC6A7Q99884 636 aa15.28■□□□□ 0.04
SSU72-203ENST00000378725 DCSTAMPQ9H295 470 aa15.28■□□□□ 0.04
SSU72-203ENST00000378725 TMEM133Q9H2Q1 129 aa15.28■□□□□ 0.04
SSU72-203ENST00000378725 RIMS4Q9H426 269 aaPredicted RBP15.28■□□□□ 0.04
SSU72-203ENST00000378725 AK3Q9UIJ7 227 aa15.28■□□□□ 0.04
SSU72-203ENST00000378725 TRAPPC2LQ9UL33 140 aa15.28■□□□□ 0.04
SSU72-203ENST00000378725 A0A087X0M5 115 aa15.27■□□□□ 0.04
SSU72-203ENST00000378725 TRBV6-6A0A0A6YYG2 114 aa15.27■□□□□ 0.04
SSU72-203ENST00000378725 A0A1B0GX30 115 aa15.27■□□□□ 0.04
SSU72-203ENST00000378725 POM121CA8CG34 1229 aa15.27■□□□□ 0.04
SSU72-203ENST00000378725 NAPSAO96009 420 aa15.27■□□□□ 0.04
SSU72-203ENST00000378725 OMGP23515 440 aa15.27■□□□□ 0.04
SSU72-203ENST00000378725 RORCP51449 518 aa15.27■□□□□ 0.04
SSU72-203ENST00000378725 DYNC1I2Q13409 638 aaKnown RBP15.27■□□□□ 0.04
SSU72-203ENST00000378725 MIDNQ504T8 468 aa15.27■□□□□ 0.04
SSU72-203ENST00000378725 C6orf183Q5T699 404 aa15.27■□□□□ 0.04
SSU72-203ENST00000378725 ZNF880Q6PDB4 577 aa15.27■□□□□ 0.04
SSU72-203ENST00000378725 ZNF554Q86TJ5 538 aa15.27■□□□□ 0.04
SSU72-203ENST00000378725 SLC25A38Q96DW6 304 aa15.27■□□□□ 0.04
SSU72-203ENST00000378725 ZNF48Q96MX3 618 aaPredicted RBP15.27■□□□□ 0.04
SSU72-203ENST00000378725 RHBDL2Q9NX52 303 aa15.27■□□□□ 0.04
SSU72-203ENST00000378725 IDI2-AS1Q9NZ38 188 aa15.27■□□□□ 0.04
SSU72-203ENST00000378725 DSCAML1Q8TD84 2053 aa15.27■□□□□ 0.03
SSU72-203ENST00000378725 A0A0A6YYJ9 748 aa15.26■□□□□ 0.03
SSU72-203ENST00000378725 MFNGO00587 321 aa15.26■□□□□ 0.03
SSU72-203ENST00000378725 SCGNO76038 276 aa15.26■□□□□ 0.03
SSU72-203ENST00000378725 HIST1H1DP16402 221 aaKnown RBP15.26■□□□□ 0.03
SSU72-203ENST00000378725 RCC1P18754 421 aaPredicted RBP15.26■□□□□ 0.03
SSU72-203ENST00000378725 COX7A1P24310 79 aa15.26■□□□□ 0.03
SSU72-203ENST00000378725 CD34P28906 385 aa15.26■□□□□ 0.03
SSU72-203ENST00000378725 SSTR5P35346 364 aa15.26■□□□□ 0.03
SSU72-203ENST00000378725 TRAT1Q6PIZ9 186 aa15.26■□□□□ 0.03
SSU72-203ENST00000378725 BAIAP2L2Q6UXY1 529 aa15.26■□□□□ 0.03
SSU72-203ENST00000378725 RFESDQ8TAC1 157 aa15.26■□□□□ 0.03
SSU72-203ENST00000378725 ARL11Q969Q4 196 aa15.26■□□□□ 0.03
SSU72-203ENST00000378725 KIRREL1Q96J84 757 aa15.26■□□□□ 0.03
SSU72-203ENST00000378725 SUCNR1Q9BXA5 334 aa15.26■□□□□ 0.03
SSU72-203ENST00000378725 OCEL1Q9H607 264 aa15.26■□□□□ 0.03
SSU72-203ENST00000378725 CEPT1Q9Y6K0 416 aa15.26■□□□□ 0.03
SSU72-203ENST00000378725 NIPBLQ6KC79 2804 aaeCLIP15.25■□□□□ 0.03
SSU72-203ENST00000378725 IGHV2-26A0A0B4J1V2 119 aa15.25■□□□□ 0.03
SSU72-203ENST00000378725 A0A1W2PRD5 423 aa15.25■□□□□ 0.03
SSU72-203ENST00000378725 A0A1W2PRF3 423 aa15.25■□□□□ 0.03
SSU72-203ENST00000378725 A0A1W2PRM7 423 aa15.25■□□□□ 0.03
SSU72-203ENST00000378725 ODF3BA8MYP8 253 aa15.25■□□□□ 0.03
SSU72-203ENST00000378725 C12orf77C9JDV5 145 aa15.25■□□□□ 0.03
SSU72-203ENST00000378725 SPCS2Q15005 226 aa15.25■□□□□ 0.03
SSU72-203ENST00000378725 ARL6IP1Q15041 203 aa15.25■□□□□ 0.03
SSU72-203ENST00000378725 DEFB112Q30KQ8 113 aa15.25■□□□□ 0.03
SSU72-203ENST00000378725 OLFML2AQ68BL7 652 aa15.25■□□□□ 0.03
SSU72-203ENST00000378725 ZNF626Q68DY1 528 aa15.25■□□□□ 0.03
SSU72-203ENST00000378725 Q6ZPA2 131 aa15.25■□□□□ 0.03
SSU72-203ENST00000378725 ABHD12Q8N2K0 398 aa15.25■□□□□ 0.03
SSU72-203ENST00000378725 OR52M1Q8NGK5 317 aa15.25■□□□□ 0.03
SSU72-203ENST00000378725 ZNF418Q8TF45 676 aaPredicted RBP15.25■□□□□ 0.03
SSU72-203ENST00000378725 AJUBAQ96IF1 538 aa15.25■□□□□ 0.03
SSU72-203ENST00000378725 CLEC7AQ9BXN2 247 aa15.25■□□□□ 0.03
SSU72-203ENST00000378725 ABCG5Q9H222 651 aa15.25■□□□□ 0.03
SSU72-203ENST00000378725 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP15.25■□□□□ 0.03
SSU72-203ENST00000378725 NAV3Q8IVL0 2385 aa15.25■□□□□ 0.03
SSU72-203ENST00000378725 NF1P21359 2839 aa15.24■□□□□ 0.03
SSU72-203ENST00000378725 A0A0A6YYH2 397 aa15.24■□□□□ 0.03
SSU72-203ENST00000378725 A0A0U1RQK1 487 aa15.24■□□□□ 0.03
SSU72-203ENST00000378725 A6NJ64 397 aa15.24■□□□□ 0.03
SSU72-203ENST00000378725 SERPINE3A8MV23 424 aa15.24■□□□□ 0.03
SSU72-203ENST00000378725 F2RL2O00254 374 aa15.24■□□□□ 0.03
SSU72-203ENST00000378725 GNB3P16520 340 aa15.24■□□□□ 0.03
SSU72-203ENST00000378725 SAA4P35542 130 aa15.24■□□□□ 0.03
SSU72-203ENST00000378725 CDNFQ49AH0 187 aa15.24■□□□□ 0.03
SSU72-203ENST00000378725 SIGLECL1Q8N7X8 197 aa15.24■□□□□ 0.03
SSU72-203ENST00000378725 ACOT12Q8WYK0 555 aa15.24■□□□□ 0.03
SSU72-203ENST00000378725 CMSS1Q9BQ75 279 aaKnown RBP15.24■□□□□ 0.03
SSU72-203ENST00000378725 HDHD3Q9BSH5 251 aaPredicted RBP15.24■□□□□ 0.03
SSU72-203ENST00000378725 TAF9BQ9HBM6 251 aa15.24■□□□□ 0.03
SSU72-203ENST00000378725 KCNIP1Q9NZI2 227 aa15.24■□□□□ 0.03
SSU72-203ENST00000378725 MEIOCA2RUB1 952 aa15.23■□□□□ 0.03
SSU72-203ENST00000378725 SPINT2O43291 252 aa15.23■□□□□ 0.03
SSU72-203ENST00000378725 TCF21O43680 179 aa15.23■□□□□ 0.03
SSU72-203ENST00000378725 HBZP02008 142 aa15.23■□□□□ 0.03
SSU72-203ENST00000378725 ZNF182P17025 639 aaPredicted RBP15.23■□□□□ 0.03
SSU72-203ENST00000378725 LOXL3P58215 753 aa15.23■□□□□ 0.03
SSU72-203ENST00000378725 HILS1P60008 231 aa15.23■□□□□ 0.03
SSU72-203ENST00000378725 ZNF260Q3ZCT1 412 aa15.23■□□□□ 0.03
SSU72-203ENST00000378725 UTF1Q5T230 341 aa15.23■□□□□ 0.03
SSU72-203ENST00000378725 Q6YL49 198 aa15.23■□□□□ 0.03
SSU72-203ENST00000378725 ISOC1Q96CN7 298 aa15.23■□□□□ 0.03
SSU72-203ENST00000378725 CMTM3Q96MX0 182 aa15.23■□□□□ 0.03
SSU72-203ENST00000378725 ZMAT3Q9HA38 289 aaKnown RBP15.23■□□□□ 0.03
SSU72-203ENST00000378725 ZNF286AQ9HBT8 521 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms