RNA–Protein interactions for RNA: ENST00000378060.8

VPS36-201, Transcript of vacuolar protein sorting 36 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS36, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-201ENST00000378060 LPAR5Q9H1C0 372 aa7.34□□□□□ -1.23
VPS36-201ENST00000378060 OR2D2Q9H210 308 aa7.34□□□□□ -1.23
VPS36-201ENST00000378060 TMEM167BQ9NRX6 74 aa7.34□□□□□ -1.23
VPS36-201ENST00000378060 LRRK1Q38SD2 2015 aa7.34□□□□□ -1.23
VPS36-201ENST00000378060 A0A1W2PQF6 199 aa7.34□□□□□ -1.23
VPS36-201ENST00000378060 NKX2-6A6NCS4 301 aa7.34□□□□□ -1.23
VPS36-201ENST00000378060 J3QT63 122 aa7.34□□□□□ -1.23
VPS36-201ENST00000378060 M0R143 59 aa7.34□□□□□ -1.23
VPS36-201ENST00000378060 SMIM10L1P0DMW3 83 aa7.34□□□□□ -1.23
VPS36-201ENST00000378060 OR3A1P47881 315 aa7.34□□□□□ -1.23
VPS36-201ENST00000378060 CEBPEQ15744 281 aa7.34□□□□□ -1.23
VPS36-201ENST00000378060 MYPOPQ86VE0 399 aaPredicted RBP7.34□□□□□ -1.23
VPS36-201ENST00000378060 FAM219AQ8IW50 185 aa7.34□□□□□ -1.23
VPS36-201ENST00000378060 OR2M3Q8NG83 312 aa7.34□□□□□ -1.23
VPS36-201ENST00000378060 OR10G8Q8NGN5 311 aa7.34□□□□□ -1.23
VPS36-201ENST00000378060 OR4A4PQ8NGN8 299 aa7.34□□□□□ -1.23
VPS36-201ENST00000378060 RFESDQ8TAC1 157 aa7.34□□□□□ -1.23
VPS36-201ENST00000378060 UBALD1Q8TB05 177 aa7.34□□□□□ -1.23
VPS36-201ENST00000378060 ACY3Q96HD9 319 aa7.34□□□□□ -1.23
VPS36-201ENST00000378060 SMIM10Q96HG1 83 aa7.34□□□□□ -1.23
VPS36-201ENST00000378060 USB1Q9BQ65 265 aaKnown RBP7.34□□□□□ -1.23
VPS36-201ENST00000378060 ANGPTL4Q9BY76 406 aa7.34□□□□□ -1.23
VPS36-201ENST00000378060 OR6C3Q9NZP0 311 aa7.34□□□□□ -1.23
VPS36-201ENST00000378060 OR2W1Q9Y3N9 320 aa7.34□□□□□ -1.23
VPS36-201ENST00000378060 TNFSF15O95150 251 aa7.34□□□□□ -1.23
VPS36-201ENST00000378060 PNPP00491 289 aa7.34□□□□□ -1.23
VPS36-201ENST00000378060 PATE4P0C8F1 98 aa7.34□□□□□ -1.23
VPS36-201ENST00000378060 MGAT2Q10469 447 aa7.34□□□□□ -1.23
VPS36-201ENST00000378060 SLC35E3Q7Z769 313 aa7.34□□□□□ -1.23
VPS36-201ENST00000378060 AQP10Q96PS8 301 aa7.34□□□□□ -1.23
VPS36-201ENST00000378060 IER2Q9BTL4 223 aa7.34□□□□□ -1.23
VPS36-201ENST00000378060 ICE1Q9Y2F5 2266 aa7.34□□□□□ -1.24
VPS36-201ENST00000378060 IGLV1-36A0A0B4J1U3 117 aa7.34□□□□□ -1.24
VPS36-201ENST00000378060 RPL36A-HNRNPH2H7BZ11 118 aa7.34□□□□□ -1.24
VPS36-201ENST00000378060 MUC1P15941 1255 aaPredicted RBP7.34□□□□□ -1.24
VPS36-201ENST00000378060 CRISP2P16562 243 aa7.34□□□□□ -1.24
VPS36-201ENST00000378060 UBE2V2Q15819 145 aa7.34□□□□□ -1.24
VPS36-201ENST00000378060 FAM27BQ5VT28 67 aa7.34□□□□□ -1.24
VPS36-201ENST00000378060 FAM78BQ5VT40 261 aa7.34□□□□□ -1.24
VPS36-201ENST00000378060 OR4S2Q8NH73 311 aa7.34□□□□□ -1.24
VPS36-201ENST00000378060 CTHRC1Q96CG8 243 aa7.34□□□□□ -1.24
VPS36-201ENST00000378060 PACRGQ96M98 296 aaPredicted RBP7.34□□□□□ -1.24
VPS36-201ENST00000378060 WDR61Q9GZS3 305 aaKnown RBP7.34□□□□□ -1.24
VPS36-201ENST00000378060 PRO1933Q9H354 126 aa7.34□□□□□ -1.24
VPS36-201ENST00000378060 MYOZ1Q9NP98 299 aaPredicted RBP7.34□□□□□ -1.24
VPS36-201ENST00000378060 CCL28Q9NRJ3 127 aa7.34□□□□□ -1.24
VPS36-201ENST00000378060 CTXND1A0A1B0GTU2 59 aa7.33□□□□□ -1.24
VPS36-201ENST00000378060 M0QZK8 103 aa7.33□□□□□ -1.24
VPS36-201ENST00000378060 GATCO43716 136 aaKnown RBP7.33□□□□□ -1.24
VPS36-201ENST00000378060 GGCTO75223 188 aaKnown RBP7.33□□□□□ -1.24
VPS36-201ENST00000378060 PITX3O75364 302 aa7.33□□□□□ -1.24
VPS36-201ENST00000378060 YIF1AO95070 293 aa7.33□□□□□ -1.24
VPS36-201ENST00000378060 PMCHP20382 165 aa7.33□□□□□ -1.24
VPS36-201ENST00000378060 RPL29P47914 159 aaKnown RBP7.33□□□□□ -1.24
VPS36-201ENST00000378060 FGF8P55075 233 aaPredicted RBP7.33□□□□□ -1.24
VPS36-201ENST00000378060 ZNF154Q13106 437 aa7.33□□□□□ -1.24
VPS36-201ENST00000378060 GUCA2BQ16661 112 aa7.33□□□□□ -1.24
VPS36-201ENST00000378060 NSUN5P2Q63ZY6 315 aa7.33□□□□□ -1.24
VPS36-201ENST00000378060 NHLRC2Q8NBF2 726 aa7.33□□□□□ -1.24
VPS36-201ENST00000378060 LRFN3Q9BTN0 628 aa7.33□□□□□ -1.24
VPS36-201ENST00000378060 OR2H1Q9GZK4 316 aa7.33□□□□□ -1.24
VPS36-201ENST00000378060 GLRX2Q9NS18 164 aa7.33□□□□□ -1.24
VPS36-201ENST00000378060 TMEM38BQ9NVV0 291 aa7.33□□□□□ -1.24
VPS36-201ENST00000378060 SLC2A8Q9NY64 477 aa7.33□□□□□ -1.24
VPS36-201ENST00000378060 A0A1B0GTQ1 180 aa7.33□□□□□ -1.24
VPS36-201ENST00000378060 KLF4O43474 513 aa7.33□□□□□ -1.24
VPS36-201ENST00000378060 TSPAN2O60636 221 aa7.33□□□□□ -1.24
VPS36-201ENST00000378060 CLEC3BP05452 202 aa7.33□□□□□ -1.24
VPS36-201ENST00000378060 PGA4P0DJD7 388 aa7.33□□□□□ -1.24
VPS36-201ENST00000378060 PGA5P0DJD9 388 aa7.33□□□□□ -1.24
VPS36-201ENST00000378060 GZMHP20718 246 aa7.33□□□□□ -1.24
VPS36-201ENST00000378060 CRYBA2P53672 197 aa7.33□□□□□ -1.24
VPS36-201ENST00000378060 SPCS3P61009 180 aa7.33□□□□□ -1.24
VPS36-201ENST00000378060 DTD1Q8TEA8 209 aa7.33□□□□□ -1.24
VPS36-201ENST00000378060 FAM122AQ96E09 287 aa7.33□□□□□ -1.24
VPS36-201ENST00000378060 A0A1W2PNV4 684 aa7.33□□□□□ -1.24
VPS36-201ENST00000378060 C11orf94C9JXX5 98 aa7.33□□□□□ -1.24
VPS36-201ENST00000378060 PDE6DO43924 150 aa7.33□□□□□ -1.24
VPS36-201ENST00000378060 H2BFSP57053 126 aa7.33□□□□□ -1.24
VPS36-201ENST00000378060 RPS4XP62701 263 aaKnown RBP7.33□□□□□ -1.24
VPS36-201ENST00000378060 RPEL1Q2QD12 228 aa7.33□□□□□ -1.24
VPS36-201ENST00000378060 FA2HQ7L5A8 372 aa7.33□□□□□ -1.24
VPS36-201ENST00000378060 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.33□□□□□ -1.24
VPS36-201ENST00000378060 OR2Z1Q8NG97 314 aa7.33□□□□□ -1.24
VPS36-201ENST00000378060 AQP3Q92482 292 aa7.33□□□□□ -1.24
VPS36-201ENST00000378060 BCL2L2Q92843 193 aaPredicted RBP7.33□□□□□ -1.24
VPS36-201ENST00000378060 CXXC4Q9H2H0 198 aa7.33□□□□□ -1.24
VPS36-201ENST00000378060 SLC7A10Q9NS82 523 aa7.33□□□□□ -1.24
VPS36-201ENST00000378060 TIMM9Q9Y5J7 89 aa7.33□□□□□ -1.24
VPS36-201ENST00000378060 OOEPA6NGQ2 149 aa7.32□□□□□ -1.24
VPS36-201ENST00000378060 CRYM-AS1A6NIL9 109 aa7.32□□□□□ -1.24
VPS36-201ENST00000378060 KIAA1324LA8MWY0 1029 aaPredicted RBP7.32□□□□□ -1.24
VPS36-201ENST00000378060 DEDDO75618 318 aa7.32□□□□□ -1.24
VPS36-201ENST00000378060 RNF151Q2KHN1 245 aa7.32□□□□□ -1.24
VPS36-201ENST00000378060 LBHQ53QV2 105 aaPredicted RBP7.32□□□□□ -1.24
VPS36-201ENST00000378060 LINC01590Q5TEZ4 76 aa7.32□□□□□ -1.24
VPS36-201ENST00000378060 LYG1Q8N1E2 194 aa7.32□□□□□ -1.24
VPS36-201ENST00000378060 OR1L4Q8NGR5 311 aa7.32□□□□□ -1.24
VPS36-201ENST00000378060 TMEM230Q96A57 120 aa7.32□□□□□ -1.24
VPS36-201ENST00000378060 WDR54Q9H977 334 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms