RNA–Protein interactions for RNA: ENST00000378037.9

CKAP2-203, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 3,629 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-203ENST00000378037 TMEM204Q9BSN7 226 aa6.92□□□□□ -1.3
CKAP2-203ENST00000378037 GSX2Q9BZM3 304 aa6.92□□□□□ -1.3
CKAP2-203ENST00000378037 ASCL3Q9NQ33 180 aa6.92□□□□□ -1.3
CKAP2-203ENST00000378037 CACNG5Q9UF02 275 aa6.92□□□□□ -1.3
CKAP2-203ENST00000378037 LAMP3Q9UQV4 416 aa6.92□□□□□ -1.3
CKAP2-203ENST00000378037 SELENOKQ9Y6D0 94 aa6.92□□□□□ -1.3
CKAP2-203ENST00000378037 UTP20O75691 2785 aaKnown RBP6.92□□□□□ -1.3
CKAP2-203ENST00000378037 hCG_38984A0A1B0GV85 526 aa6.92□□□□□ -1.3
CKAP2-203ENST00000378037 SERPINE3A8MV23 424 aa6.92□□□□□ -1.3
CKAP2-203ENST00000378037 PRR33A8MZF0 331 aa6.92□□□□□ -1.3
CKAP2-203ENST00000378037 TSPAN15O95858 294 aa6.92□□□□□ -1.3
CKAP2-203ENST00000378037 UBBP0CG47 229 aa6.92□□□□□ -1.3
CKAP2-203ENST00000378037 GALP22466 123 aa6.92□□□□□ -1.3
CKAP2-203ENST00000378037 G6PCP35575 357 aa6.92□□□□□ -1.3
CKAP2-203ENST00000378037 RBM11P57052 281 aaKnown RBP6.92□□□□□ -1.3
CKAP2-203ENST00000378037 RBPJQ06330 500 aa6.92□□□□□ -1.3
CKAP2-203ENST00000378037 ZFP82Q8N141 532 aa6.92□□□□□ -1.3
CKAP2-203ENST00000378037 OR52M1Q8NGK5 317 aa6.92□□□□□ -1.3
CKAP2-203ENST00000378037 SFT2D1Q8WV19 159 aa6.92□□□□□ -1.3
CKAP2-203ENST00000378037 TMEM54Q969K7 222 aa6.92□□□□□ -1.3
CKAP2-203ENST00000378037 SCPEP1Q9HB40 452 aa6.92□□□□□ -1.3
CKAP2-203ENST00000378037 HEYLQ9NQ87 328 aaPredicted RBP6.92□□□□□ -1.3
CKAP2-203ENST00000378037 FOXD3Q9UJU5 478 aaPredicted RBP6.92□□□□□ -1.3
CKAP2-203ENST00000378037 ATRQ13535 2644 aa6.92□□□□□ -1.3
CKAP2-203ENST00000378037 C1QTNF9BB2RNN3 333 aa6.91□□□□□ -1.3
CKAP2-203ENST00000378037 HAND1O96004 215 aa6.91□□□□□ -1.3
CKAP2-203ENST00000378037 C1QTNF9P0C862 333 aa6.91□□□□□ -1.3
CKAP2-203ENST00000378037 ZNF883P0CG24 379 aa6.91□□□□□ -1.3
CKAP2-203ENST00000378037 DAOP14920 347 aa6.91□□□□□ -1.3
CKAP2-203ENST00000378037 GRNP28799 593 aaKnown RBP6.91□□□□□ -1.3
CKAP2-203ENST00000378037 RPL12P30050 165 aaKnown RBP6.91□□□□□ -1.3
CKAP2-203ENST00000378037 COL10A1Q03692 680 aa6.91□□□□□ -1.3
CKAP2-203ENST00000378037 TOR2AQ5JU69 321 aa6.91□□□□□ -1.3
CKAP2-203ENST00000378037 CCDC28AQ8IWP9 274 aa6.91□□□□□ -1.3
CKAP2-203ENST00000378037 SLC35G3Q8N808 338 aa6.91□□□□□ -1.3
CKAP2-203ENST00000378037 CCDC71LQ8N9Z2 235 aa6.91□□□□□ -1.3
CKAP2-203ENST00000378037 HPSE2Q8WWQ2 592 aa6.91□□□□□ -1.3
CKAP2-203ENST00000378037 WBP1Q96G27 269 aa6.91□□□□□ -1.3
CKAP2-203ENST00000378037 SLC17A5Q9NRA2 495 aa6.91□□□□□ -1.3
CKAP2-203ENST00000378037 COL27A1Q8IZC6 1860 aaPredicted RBP6.91□□□□□ -1.3
CKAP2-203ENST00000378037 TMEM14DPA8MWL7 114 aa6.91□□□□□ -1.3
CKAP2-203ENST00000378037 SCAF4O95104 1147 aaKnown RBP6.91□□□□□ -1.3
CKAP2-203ENST00000378037 SULT1A3P0DMM9 295 aa6.91□□□□□ -1.3
CKAP2-203ENST00000378037 SULT1A4P0DMN0 295 aa6.91□□□□□ -1.3
CKAP2-203ENST00000378037 TNFSF4P23510 183 aa6.91□□□□□ -1.3
CKAP2-203ENST00000378037 KIR2DL2P43627 348 aaPredicted RBP6.91□□□□□ -1.3
CKAP2-203ENST00000378037 DUX4L9Q6RFH8 374 aaPredicted RBP6.91□□□□□ -1.3
CKAP2-203ENST00000378037 SPAG16Q8N0X2 631 aa6.91□□□□□ -1.3
CKAP2-203ENST00000378037 FAM216BQ8N7L0 139 aa6.91□□□□□ -1.3
CKAP2-203ENST00000378037 SCGB1C1Q8TD33 95 aa6.91□□□□□ -1.3
CKAP2-203ENST00000378037 SLC25A28Q96A46 364 aa6.91□□□□□ -1.3
CKAP2-203ENST00000378037 GCM1Q9NP62 436 aa6.91□□□□□ -1.3
CKAP2-203ENST00000378037 IGKV1D-13A0A0B4J2D9 117 aa6.91□□□□□ -1.3
CKAP2-203ENST00000378037 VSTM5A8MXK1 200 aa6.91□□□□□ -1.3
CKAP2-203ENST00000378037 E9PQ18 207 aa6.91□□□□□ -1.3
CKAP2-203ENST00000378037 PPIHO43447 177 aaKnown RBP6.91□□□□□ -1.3
CKAP2-203ENST00000378037 GIPP09681 153 aaPredicted RBP6.91□□□□□ -1.3
CKAP2-203ENST00000378037 IGKV1-13P0DP09 117 aa6.91□□□□□ -1.3
CKAP2-203ENST00000378037 GABRA1P14867 456 aa6.91□□□□□ -1.3
CKAP2-203ENST00000378037 PMELP40967 661 aa6.91□□□□□ -1.3
CKAP2-203ENST00000378037 PRAMEF5Q5TYX0 476 aa6.91□□□□□ -1.3
CKAP2-203ENST00000378037 OR6K3Q8NGY3 331 aa6.91□□□□□ -1.3
CKAP2-203ENST00000378037 ST8SIA2Q92186 375 aa6.91□□□□□ -1.3
CKAP2-203ENST00000378037 SLA2Q9H6Q3 261 aa6.91□□□□□ -1.3
CKAP2-203ENST00000378037 POLDIP2Q9Y2S7 368 aa6.91□□□□□ -1.3
CKAP2-203ENST00000378037 USP24Q9UPU5 2620 aa6.91□□□□□ -1.3
CKAP2-203ENST00000378037 WIPF3A6NGB9 483 aa6.9□□□□□ -1.3
CKAP2-203ENST00000378037 CRYABP02511 175 aaKnown RBP6.9□□□□□ -1.3
CKAP2-203ENST00000378037 ISG15P05161 165 aa6.9□□□□□ -1.3
CKAP2-203ENST00000378037 GPR12P47775 334 aa6.9□□□□□ -1.3
CKAP2-203ENST00000378037 ZBTB37Q5TC79 503 aa6.9□□□□□ -1.3
CKAP2-203ENST00000378037 THNSL2Q86YJ6 484 aa6.9□□□□□ -1.3
CKAP2-203ENST00000378037 GON7Q9BXV9 100 aa6.9□□□□□ -1.3
CKAP2-203ENST00000378037 AMDHD2Q9Y303 409 aa6.9□□□□□ -1.3
CKAP2-203ENST00000378037 C16orf97H3BN30 126 aa6.9□□□□□ -1.3
CKAP2-203ENST00000378037 ST8SIA3O43173 380 aa6.9□□□□□ -1.3
CKAP2-203ENST00000378037 ZG16O60844 167 aa6.9□□□□□ -1.3
CKAP2-203ENST00000378037 HSPB1P04792 205 aaKnown RBP6.9□□□□□ -1.3
CKAP2-203ENST00000378037 PLA2G5P39877 138 aa6.9□□□□□ -1.3
CKAP2-203ENST00000378037 TAS2R31P59538 309 aa6.9□□□□□ -1.3
CKAP2-203ENST00000378037 C1orf100Q5SVJ3 147 aa6.9□□□□□ -1.3
CKAP2-203ENST00000378037 C10orf128Q5T292 105 aa6.9□□□□□ -1.3
CKAP2-203ENST00000378037 LAMTOR1Q6IAA8 161 aa6.9□□□□□ -1.3
CKAP2-203ENST00000378037 LGI3Q8N145 548 aa6.9□□□□□ -1.3
CKAP2-203ENST00000378037 GALMQ96C23 342 aa6.9□□□□□ -1.3
CKAP2-203ENST00000378037 POM121L2Q96KW2 1035 aa6.9□□□□□ -1.3
CKAP2-203ENST00000378037 SAP30LQ9HAJ7 183 aa6.9□□□□□ -1.3
CKAP2-203ENST00000378037 SDHAF2Q9NX18 166 aa6.9□□□□□ -1.3
CKAP2-203ENST00000378037 WASF3Q9UPY6 502 aa6.9□□□□□ -1.3
CKAP2-203ENST00000378037 IGHV3-35A0A0C4DH35 117 aa6.9□□□□□ -1.31
CKAP2-203ENST00000378037 CRYZL1O95825 349 aa6.9□□□□□ -1.31
CKAP2-203ENST00000378037 OR4A8P0C604 315 aa6.9□□□□□ -1.31
CKAP2-203ENST00000378037 IGFBP3P17936 291 aaPredicted RBP6.9□□□□□ -1.31
CKAP2-203ENST00000378037 UBE2G2P60604 165 aa6.9□□□□□ -1.31
CKAP2-203ENST00000378037 SIGIRRQ6IA17 410 aa6.9□□□□□ -1.31
CKAP2-203ENST00000378037 C20orf204Q6ZNR8 217 aa6.9□□□□□ -1.31
CKAP2-203ENST00000378037 Q6ZRG5 221 aa6.9□□□□□ -1.31
CKAP2-203ENST00000378037 LHFPL4Q7Z7J7 247 aa6.9□□□□□ -1.31
CKAP2-203ENST00000378037 KIR3DL3Q8N743 410 aa6.9□□□□□ -1.31
CKAP2-203ENST00000378037 OR1S2Q8NGQ3 325 aa6.9□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms