RNA–Protein interactions for RNA: ENST00000378026.4

CKAP4-201, Transcript of cytoskeleton associated protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKAP4, Length 3,093 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-201ENST00000378026 VDAC1P21796 283 aa13.64□□□□□ -0.23
CKAP4-201ENST00000378026 CTSSP25774 331 aa13.64□□□□□ -0.23
CKAP4-201ENST00000378026 BSXQ3C1V8 233 aa13.64□□□□□ -0.23
CKAP4-201ENST00000378026 NMSQ5H8A3 153 aa13.64□□□□□ -0.23
CKAP4-201ENST00000378026 OR5L2Q8NGL0 311 aa13.64□□□□□ -0.23
CKAP4-201ENST00000378026 OR2V1Q8NHB1 315 aa13.64□□□□□ -0.23
CKAP4-201ENST00000378026 SPSB1Q96BD6 273 aa13.64□□□□□ -0.23
CKAP4-201ENST00000378026 CFHR5Q9BXR6 569 aa13.64□□□□□ -0.23
CKAP4-201ENST00000378026 CELSR3Q9NYQ7 3312 aa13.64□□□□□ -0.23
CKAP4-201ENST00000378026 SUMO3P55854 103 aaPredicted RBP13.64□□□□□ -0.23
CKAP4-201ENST00000378026 CNN3Q15417 329 aaKnown RBP13.64□□□□□ -0.23
CKAP4-201ENST00000378026 TMEM241Q24JQ0 296 aa13.64□□□□□ -0.23
CKAP4-201ENST00000378026 GPR137CQ8N3F9 429 aa13.64□□□□□ -0.23
CKAP4-201ENST00000378026 OR10G4Q8NGN3 311 aa13.64□□□□□ -0.23
CKAP4-201ENST00000378026 ADGRG7Q96K78 797 aa13.64□□□□□ -0.23
CKAP4-201ENST00000378026 AURKAIP1Q9NWT8 199 aaPredicted RBP13.64□□□□□ -0.23
CKAP4-201ENST00000378026 VAX2Q9UIW0 290 aa13.64□□□□□ -0.23
CKAP4-201ENST00000378026 MAP1LC3B2A6NCE7 125 aa13.63□□□□□ -0.23
CKAP4-201ENST00000378026 ZNF705FA8MVS1 300 aaPredicted RBP13.63□□□□□ -0.23
CKAP4-201ENST00000378026 ZNF705DP0CH99 300 aaPredicted RBP13.63□□□□□ -0.23
CKAP4-201ENST00000378026 ZNF705BP0CI00 300 aaPredicted RBP13.63□□□□□ -0.23
CKAP4-201ENST00000378026 ARL16Q0P5N6 197 aa13.63□□□□□ -0.23
CKAP4-201ENST00000378026 PLCXD3Q63HM9 321 aa13.63□□□□□ -0.23
CKAP4-201ENST00000378026 ABLIM2Q6H8Q1 611 aa13.63□□□□□ -0.23
CKAP4-201ENST00000378026 SLC25A26Q70HW3 274 aa13.63□□□□□ -0.23
CKAP4-201ENST00000378026 OR1K1Q8NGR3 316 aa13.63□□□□□ -0.23
CKAP4-201ENST00000378026 MAP1LC3BQ9GZQ8 125 aa13.63□□□□□ -0.23
CKAP4-201ENST00000378026 CTDSP1Q9GZU7 261 aa13.63□□□□□ -0.23
CKAP4-201ENST00000378026 A0A1B0GX78 115 aa13.63□□□□□ -0.23
CKAP4-201ENST00000378026 HERPUD1Q15011 391 aa13.63□□□□□ -0.23
CKAP4-201ENST00000378026 BATFQ16520 125 aa13.63□□□□□ -0.23
CKAP4-201ENST00000378026 WDR5BQ86VZ2 330 aa13.63□□□□□ -0.23
CKAP4-201ENST00000378026 CALHM1Q8IU99 346 aa13.63□□□□□ -0.23
CKAP4-201ENST00000378026 OR51G1Q8NGK1 321 aa13.63□□□□□ -0.23
CKAP4-201ENST00000378026 LHX4Q969G2 390 aa13.63□□□□□ -0.23
CKAP4-201ENST00000378026 NAT8Q9UHE5 227 aa13.63□□□□□ -0.23
CKAP4-201ENST00000378026 RNF115Q9Y4L5 304 aa13.63□□□□□ -0.23
CKAP4-201ENST00000378026 AQP7P3A6NL99 342 aa13.62□□□□□ -0.23
CKAP4-201ENST00000378026 DHHO43323 396 aa13.62□□□□□ -0.23
CKAP4-201ENST00000378026 FAM3BP58499 235 aaPredicted RBP13.62□□□□□ -0.23
CKAP4-201ENST00000378026 IQCJQ1A5X6 159 aa13.62□□□□□ -0.23
CKAP4-201ENST00000378026 GATAD1Q8WUU5 269 aa13.62□□□□□ -0.23
CKAP4-201ENST00000378026 NABP1Q96AH0 204 aa13.62□□□□□ -0.23
CKAP4-201ENST00000378026 ULBP2Q9BZM5 246 aa13.62□□□□□ -0.23
CKAP4-201ENST00000378026 LILRA5A6NI73 299 aa13.62□□□□□ -0.23
CKAP4-201ENST00000378026 SLC22A20A6NK97 555 aa13.62□□□□□ -0.23
CKAP4-201ENST00000378026 NPIPA2E9PIF3 369 aa13.62□□□□□ -0.23
CKAP4-201ENST00000378026 NPIPA3F8WFD2 350 aa13.62□□□□□ -0.23
CKAP4-201ENST00000378026 MLF1P58340 268 aa13.62□□□□□ -0.23
CKAP4-201ENST00000378026 RPL23P62829 140 aaKnown RBP13.62□□□□□ -0.23
CKAP4-201ENST00000378026 CST9LP1Q5W188 147 aa13.62□□□□□ -0.23
CKAP4-201ENST00000378026 EXTL1Q92935 676 aa13.62□□□□□ -0.23
CKAP4-201ENST00000378026 DOCK11Q5JSL3 2073 aa13.62□□□□□ -0.23
CKAP4-201ENST00000378026 G3V3Y1 287 aa13.62□□□□□ -0.23
CKAP4-201ENST00000378026 NPSP0C0P6 89 aa13.62□□□□□ -0.23
CKAP4-201ENST00000378026 MDH2P40926 338 aaKnown RBP13.62□□□□□ -0.23
CKAP4-201ENST00000378026 TDGF1P3P51864 188 aa13.62□□□□□ -0.23
CKAP4-201ENST00000378026 DPPA3Q6W0C5 159 aa13.62□□□□□ -0.23
CKAP4-201ENST00000378026 GPR146Q96CH1 333 aa13.62□□□□□ -0.23
CKAP4-201ENST00000378026 FGF21Q9NSA1 209 aa13.62□□□□□ -0.23
CKAP4-201ENST00000378026 SLC39A9Q9NUM3 307 aa13.62□□□□□ -0.23
CKAP4-201ENST00000378026 FKBP11Q9NYL4 201 aa13.62□□□□□ -0.23
CKAP4-201ENST00000378026 ABCA7Q8IZY2 2146 aa13.61□□□□□ -0.23
CKAP4-201ENST00000378026 TRAV1-1A0A0B4J248 108 aa13.61□□□□□ -0.23
CKAP4-201ENST00000378026 C3orf80F5H4A9 247 aa13.61□□□□□ -0.23
CKAP4-201ENST00000378026 SFTPCP11686 197 aa13.61□□□□□ -0.23
CKAP4-201ENST00000378026 DNASE2BQ8WZ79 361 aa13.61□□□□□ -0.23
CKAP4-201ENST00000378026 VPS13AQ96RL7 3174 aa13.61□□□□□ -0.23
CKAP4-201ENST00000378026 CNOT4O95628 575 aaKnown RBP13.61□□□□□ -0.23
CKAP4-201ENST00000378026 BMP5P22003 454 aa13.61□□□□□ -0.23
CKAP4-201ENST00000378026 CHRNA7P36544 502 aa13.61□□□□□ -0.23
CKAP4-201ENST00000378026 PTGDSP41222 190 aa13.61□□□□□ -0.23
CKAP4-201ENST00000378026 ERVFC1-1P60608 527 aa13.61□□□□□ -0.23
CKAP4-201ENST00000378026 CFHR1Q03591 330 aa13.61□□□□□ -0.23
CKAP4-201ENST00000378026 ZNF468Q5VIY5 522 aaPredicted RBP13.61□□□□□ -0.23
CKAP4-201ENST00000378026 LHFPL2Q6ZUX7 228 aa13.61□□□□□ -0.23
CKAP4-201ENST00000378026 MRGPRGQ86SM5 289 aa13.61□□□□□ -0.23
CKAP4-201ENST00000378026 MAML2Q8IZL2 1156 aaPredicted RBP13.61□□□□□ -0.23
CKAP4-201ENST00000378026 HS3ST6Q96QI5 342 aa13.61□□□□□ -0.23
CKAP4-201ENST00000378026 CDCA3Q99618 268 aaPredicted RBP13.61□□□□□ -0.23
CKAP4-201ENST00000378026 IL36RNQ9UBH0 155 aa13.61□□□□□ -0.23
CKAP4-201ENST00000378026 CST2P09228 141 aa13.6□□□□□ -0.23
CKAP4-201ENST00000378026 RBM11P57052 281 aaKnown RBP13.6□□□□□ -0.23
CKAP4-201ENST00000378026 EIF3IQ13347 325 aaKnown RBP13.6□□□□□ -0.23
CKAP4-201ENST00000378026 Q6ZRM9 215 aa13.6□□□□□ -0.23
CKAP4-201ENST00000378026 Q6ZS52 159 aa13.6□□□□□ -0.23
CKAP4-201ENST00000378026 ANKRD37Q7Z713 158 aa13.6□□□□□ -0.23
CKAP4-201ENST00000378026 ZNF295-AS1Q8N0V1 137 aa13.6□□□□□ -0.23
CKAP4-201ENST00000378026 TMEM208Q9BTX3 173 aa13.6□□□□□ -0.23
CKAP4-201ENST00000378026 MYOTQ9UBF9 498 aa13.6□□□□□ -0.23
CKAP4-201ENST00000378026 POLR3KQ9Y2Y1 108 aaPredicted RBP13.6□□□□□ -0.23
CKAP4-201ENST00000378026 PSG2P11465 335 aa13.6□□□□□ -0.23
CKAP4-201ENST00000378026 ZNF16P17020 682 aaPredicted RBP13.6□□□□□ -0.23
CKAP4-201ENST00000378026 TMEM211Q6ICI0 200 aa13.6□□□□□ -0.23
CKAP4-201ENST00000378026 TMEM256Q8N2U0 113 aa13.6□□□□□ -0.23
CKAP4-201ENST00000378026 ZNF611Q8N823 705 aa13.6□□□□□ -0.23
CKAP4-201ENST00000378026 OR2M3Q8NG83 312 aa13.6□□□□□ -0.23
CKAP4-201ENST00000378026 OR4F5Q8NH21 305 aa13.6□□□□□ -0.23
CKAP4-201ENST00000378026 TMEM170AQ8WVE7 144 aa13.6□□□□□ -0.23
CKAP4-201ENST00000378026 OR4F4Q96R69 305 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms