RNA–Protein interactions for RNA: ENST00000377865.6

PCDH9-202, Transcript of protocadherin 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH9, Length 5,709 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-202ENST00000377865 HOXA5P20719 270 aa7.64□□□□□ -1.19
PCDH9-202ENST00000377865 C16orf47Q6ZP98 133 aaPredicted RBP7.64□□□□□ -1.19
PCDH9-202ENST00000377865 TXNDC17Q9BRA2 123 aa7.64□□□□□ -1.19
PCDH9-202ENST00000377865 TMEM204Q9BSN7 226 aa7.64□□□□□ -1.19
PCDH9-202ENST00000377865 P4HTMQ9NXG6 502 aa7.64□□□□□ -1.19
PCDH9-202ENST00000377865 NAT8BQ9UHF3 227 aa7.64□□□□□ -1.19
PCDH9-202ENST00000377865 ZNF729A6NN14 1252 aaPredicted RBP7.64□□□□□ -1.19
PCDH9-202ENST00000377865 TRAF3IP2O43734 574 aaPredicted RBP7.64□□□□□ -1.19
PCDH9-202ENST00000377865 OR10J4P0C629 311 aa7.64□□□□□ -1.19
PCDH9-202ENST00000377865 PPP1CCP36873 323 aaKnown RBP7.64□□□□□ -1.19
PCDH9-202ENST00000377865 ZNF385CQ66K41 422 aaPredicted RBP7.64□□□□□ -1.19
PCDH9-202ENST00000377865 RAB24Q969Q5 203 aa7.64□□□□□ -1.19
PCDH9-202ENST00000377865 MUCL1Q96DR8 90 aa7.64□□□□□ -1.19
PCDH9-202ENST00000377865 RNF2Q99496 336 aa7.64□□□□□ -1.19
PCDH9-202ENST00000377865 RPP25Q9BUL9 199 aaKnown RBP7.64□□□□□ -1.19
PCDH9-202ENST00000377865 OR2D2Q9H210 308 aa7.64□□□□□ -1.19
PCDH9-202ENST00000377865 SH3BGRL3Q9H299 93 aa7.64□□□□□ -1.19
PCDH9-202ENST00000377865 FNDC1Q4ZHG4 1894 aaPredicted RBP7.64□□□□□ -1.19
PCDH9-202ENST00000377865 C2CD4DB7Z1M9 353 aa7.64□□□□□ -1.19
PCDH9-202ENST00000377865 PGA5P0DJD9 388 aa7.64□□□□□ -1.19
PCDH9-202ENST00000377865 ID4P47928 161 aa7.64□□□□□ -1.19
PCDH9-202ENST00000377865 ERHP84090 104 aaKnown RBP7.64□□□□□ -1.19
PCDH9-202ENST00000377865 HABP2Q14520 560 aaPredicted RBP7.64□□□□□ -1.19
PCDH9-202ENST00000377865 OR52M1Q8NGK5 317 aa7.64□□□□□ -1.19
PCDH9-202ENST00000377865 OR10D3Q8NH80 312 aa7.64□□□□□ -1.19
PCDH9-202ENST00000377865 BOD1Q96IK1 185 aa7.64□□□□□ -1.19
PCDH9-202ENST00000377865 PHF7Q9BWX1 381 aaPredicted RBP7.64□□□□□ -1.19
PCDH9-202ENST00000377865 CHRNA10Q9GZZ6 450 aa7.64□□□□□ -1.19
PCDH9-202ENST00000377865 TMEM167BQ9NRX6 74 aa7.64□□□□□ -1.19
PCDH9-202ENST00000377865 AQP7O14520 342 aa7.63□□□□□ -1.19
PCDH9-202ENST00000377865 ACAA1P09110 424 aaPredicted RBP7.63□□□□□ -1.19
PCDH9-202ENST00000377865 KLK2P20151 261 aa7.63□□□□□ -1.19
PCDH9-202ENST00000377865 PMCHP20382 165 aa7.63□□□□□ -1.19
PCDH9-202ENST00000377865 RPS23P62266 143 aaKnown RBP7.63□□□□□ -1.19
PCDH9-202ENST00000377865 CPEB3Q8NE35 698 aaKnown RBP7.63□□□□□ -1.19
PCDH9-202ENST00000377865 OR5AU1Q8NGC0 362 aa7.63□□□□□ -1.19
PCDH9-202ENST00000377865 OR5A2Q8NGI9 324 aa7.63□□□□□ -1.19
PCDH9-202ENST00000377865 OR2I1PQ8NGU4 316 aa7.63□□□□□ -1.19
PCDH9-202ENST00000377865 POM121L2Q96KW2 1035 aa7.63□□□□□ -1.19
PCDH9-202ENST00000377865 PMS2P1A4D2B8 440 aa7.63□□□□□ -1.19
PCDH9-202ENST00000377865 OOEPA6NGQ2 149 aa7.63□□□□□ -1.19
PCDH9-202ENST00000377865 CFPP27918 469 aa7.63□□□□□ -1.19
PCDH9-202ENST00000377865 VAMP3Q15836 100 aa7.63□□□□□ -1.19
PCDH9-202ENST00000377865 RNF151Q2KHN1 245 aa7.63□□□□□ -1.19
PCDH9-202ENST00000377865 SMIM15Q7Z3B0 74 aa7.63□□□□□ -1.19
PCDH9-202ENST00000377865 SAXO1Q8IYX7 474 aa7.63□□□□□ -1.19
PCDH9-202ENST00000377865 OR10AD1Q8NGE0 317 aa7.63□□□□□ -1.19
PCDH9-202ENST00000377865 DTD1Q8TEA8 209 aa7.63□□□□□ -1.19
PCDH9-202ENST00000377865 GNRHR2Q96P88 292 aa7.63□□□□□ -1.19
PCDH9-202ENST00000377865 SH2D2AQ9NP31 389 aa7.63□□□□□ -1.19
PCDH9-202ENST00000377865 CLCF1Q9UBD9 225 aa7.63□□□□□ -1.19
PCDH9-202ENST00000377865 TRBV6-7A0A0A0MS04 114 aa7.63□□□□□ -1.19
PCDH9-202ENST00000377865 A0A1W2PP11 408 aa7.63□□□□□ -1.19
PCDH9-202ENST00000377865 FAM90A26D6RGX4 464 aa7.63□□□□□ -1.19
PCDH9-202ENST00000377865 PSG2P11465 335 aa7.63□□□□□ -1.19
PCDH9-202ENST00000377865 RAB7AP51149 207 aa7.63□□□□□ -1.19
PCDH9-202ENST00000377865 TAS2R60P59551 318 aa7.63□□□□□ -1.19
PCDH9-202ENST00000377865 TMEM183AQ8IXX5 376 aa7.63□□□□□ -1.19
PCDH9-202ENST00000377865 OR4C5Q8NGB2 326 aa7.63□□□□□ -1.19
PCDH9-202ENST00000377865 OR1L6Q8NGR2 347 aa7.63□□□□□ -1.19
PCDH9-202ENST00000377865 DYRK2Q92630 601 aa7.63□□□□□ -1.19
PCDH9-202ENST00000377865 GALNT14Q96FL9 552 aa7.63□□□□□ -1.19
PCDH9-202ENST00000377865 GMPPAQ96IJ6 420 aaPredicted RBP7.63□□□□□ -1.19
PCDH9-202ENST00000377865 TRIB1Q96RU8 372 aa7.63□□□□□ -1.19
PCDH9-202ENST00000377865 COA4Q9NYJ1 87 aa7.63□□□□□ -1.19
PCDH9-202ENST00000377865 BET1LQ9NYM9 111 aa7.63□□□□□ -1.19
PCDH9-202ENST00000377865 NAGKQ9UJ70 344 aa7.63□□□□□ -1.19
PCDH9-202ENST00000377865 ARL2-SNX15V9GYD0 113 aa7.63□□□□□ -1.19
PCDH9-202ENST00000377865 H0YL77 283 aa7.63□□□□□ -1.19
PCDH9-202ENST00000377865 NDUFA2O43678 99 aa7.63□□□□□ -1.19
PCDH9-202ENST00000377865 CXorf1O96002 111 aa7.63□□□□□ -1.19
PCDH9-202ENST00000377865 LIFP15018 202 aa7.63□□□□□ -1.19
PCDH9-202ENST00000377865 PLAC9Q5JTB6 97 aa7.63□□□□□ -1.19
PCDH9-202ENST00000377865 ACER2Q5QJU3 275 aa7.63□□□□□ -1.19
PCDH9-202ENST00000377865 ZNF468Q5VIY5 522 aaPredicted RBP7.63□□□□□ -1.19
PCDH9-202ENST00000377865 C19orf35Q6ZS72 473 aa7.63□□□□□ -1.19
PCDH9-202ENST00000377865 SLC22A18ASQ8N1D0 253 aa7.63□□□□□ -1.19
PCDH9-202ENST00000377865 ABHD5Q8WTS1 349 aa7.63□□□□□ -1.19
PCDH9-202ENST00000377865 PSMG3Q9BT73 122 aaPredicted RBP7.63□□□□□ -1.19
PCDH9-202ENST00000377865 GPR35Q9HC97 309 aa7.63□□□□□ -1.19
PCDH9-202ENST00000377865 SIT1Q9Y3P8 196 aa7.63□□□□□ -1.19
PCDH9-202ENST00000377865 LINC00587B1AMM8 73 aa7.63□□□□□ -1.19
PCDH9-202ENST00000377865 HSBP1O75506 76 aa7.63□□□□□ -1.19
PCDH9-202ENST00000377865 C1QL1O75973 258 aa7.63□□□□□ -1.19
PCDH9-202ENST00000377865 IGHV4-34P06331 123 aa7.63□□□□□ -1.19
PCDH9-202ENST00000377865 F2RP25116 425 aa7.63□□□□□ -1.19
PCDH9-202ENST00000377865 PMELP40967 661 aa7.63□□□□□ -1.19
PCDH9-202ENST00000377865 FGF12P61328 243 aa7.63□□□□□ -1.19
PCDH9-202ENST00000377865 HLA-DRB5Q30154 266 aa7.63□□□□□ -1.19
PCDH9-202ENST00000377865 KIAA1324LA8MWY0 1029 aaPredicted RBP7.62□□□□□ -1.19
PCDH9-202ENST00000377865 COX7A2P2O60397 106 aa7.62□□□□□ -1.19
PCDH9-202ENST00000377865 TRGC1P0CF51 173 aa7.62□□□□□ -1.19
PCDH9-202ENST00000377865 ZNF25P17030 456 aaPredicted RBP7.62□□□□□ -1.19
PCDH9-202ENST00000377865 WIPI1Q5MNZ9 446 aaPredicted RBP7.62□□□□□ -1.19
PCDH9-202ENST00000377865 ABLIM2Q6H8Q1 611 aa7.62□□□□□ -1.19
PCDH9-202ENST00000377865 Q6ZS52 159 aa7.62□□□□□ -1.19
PCDH9-202ENST00000377865 CRIPAKQ8N1N5 446 aa7.62□□□□□ -1.19
PCDH9-202ENST00000377865 ST8SIA5O15466 376 aa7.62□□□□□ -1.19
PCDH9-202ENST00000377865 PAGE4O60829 102 aa7.62□□□□□ -1.19
PCDH9-202ENST00000377865 IGKV3-11P04433 115 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms