RNA–Protein interactions for RNA: ENST00000376707.4

VSX1-201, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-201ENST00000376707 SSTR5P35346 364 aa16.72■□□□□ 0.27
VSX1-201ENST00000376707 RAB7AP51149 207 aa16.72■□□□□ 0.27
VSX1-201ENST00000376707 RBM11P57052 281 aaKnown RBP16.72■□□□□ 0.27
VSX1-201ENST00000376707 SLC35A2P78381 396 aa16.72■□□□□ 0.27
VSX1-201ENST00000376707 C8orf59Q8N0T1 100 aaPredicted RBP16.72■□□□□ 0.27
VSX1-201ENST00000376707 OSR2Q8N2R0 312 aa16.72■□□□□ 0.27
VSX1-201ENST00000376707 DRAM1Q8N682 238 aa16.72■□□□□ 0.27
VSX1-201ENST00000376707 SUMF2Q8NBJ7 301 aa16.72■□□□□ 0.27
VSX1-201ENST00000376707 OR10A7Q8NGE5 316 aa16.72■□□□□ 0.27
VSX1-201ENST00000376707 OR10X1Q8NGY0 326 aa16.72■□□□□ 0.27
VSX1-201ENST00000376707 ORAI1Q96D31 301 aa16.72■□□□□ 0.27
VSX1-201ENST00000376707 S100A13Q99584 98 aa16.72■□□□□ 0.27
VSX1-201ENST00000376707 PLCXD1Q9NUJ7 323 aa16.72■□□□□ 0.27
VSX1-201ENST00000376707 PAK1IP1Q9NWT1 392 aaPredicted RBP16.72■□□□□ 0.27
VSX1-201ENST00000376707 PSORS1C1Q9UIG5 152 aa16.72■□□□□ 0.27
VSX1-201ENST00000376707 TRAV39A0A0B4J263 110 aa16.71■□□□□ 0.27
VSX1-201ENST00000376707 A0A1W2PPI3 338 aa16.71■□□□□ 0.27
VSX1-201ENST00000376707 PSMB11A5LHX3 300 aa16.71■□□□□ 0.27
VSX1-201ENST00000376707 OR7C1O76099 320 aaPredicted RBP16.71■□□□□ 0.27
VSX1-201ENST00000376707 TMEM11P17152 192 aa16.71■□□□□ 0.27
VSX1-201ENST00000376707 FSTP19883 344 aa16.71■□□□□ 0.27
VSX1-201ENST00000376707 TAS2R43P59537 309 aa16.71■□□□□ 0.27
VSX1-201ENST00000376707 SLC16A12Q6ZSM3 486 aa16.71■□□□□ 0.27
VSX1-201ENST00000376707 LINC00596Q86U02 117 aa16.71■□□□□ 0.27
VSX1-201ENST00000376707 OR8H3Q8N146 312 aa16.71■□□□□ 0.27
VSX1-201ENST00000376707 ZFP41Q8N8Y5 198 aa16.71■□□□□ 0.27
VSX1-201ENST00000376707 ZNF184Q99676 751 aaPredicted RBP16.71■□□□□ 0.27
VSX1-201ENST00000376707 CKLFQ9UBR5 152 aa16.71■□□□□ 0.27
VSX1-201ENST00000376707 TRAV8-7A0A075B6U6 113 aa16.7■□□□□ 0.26
VSX1-201ENST00000376707 TRBV5-7A0A0A0MS05 114 aa16.7■□□□□ 0.26
VSX1-201ENST00000376707 ZNF780AO75290 641 aaPredicted RBP16.7■□□□□ 0.26
VSX1-201ENST00000376707 DIAPH2-AS1Q14236 149 aa16.7■□□□□ 0.26
VSX1-201ENST00000376707 RCC1LQ96I51 464 aaKnown RBP16.7■□□□□ 0.26
VSX1-201ENST00000376707 ZNF581Q9P0T4 197 aa16.7■□□□□ 0.26
VSX1-201ENST00000376707 TMEM30CPA0ZSE6 113 aa16.69■□□□□ 0.26
VSX1-201ENST00000376707 MAGEA13PA6NCF6 341 aa16.69■□□□□ 0.26
VSX1-201ENST00000376707 CD1AP06126 327 aa16.69■□□□□ 0.26
VSX1-201ENST00000376707 GZMHP20718 246 aa16.69■□□□□ 0.26
VSX1-201ENST00000376707 SERPINA2P20848 420 aa16.69■□□□□ 0.26
VSX1-201ENST00000376707 HNF4GQ14541 408 aa16.69■□□□□ 0.26
VSX1-201ENST00000376707 MPV17LQ2QL34 196 aa16.69■□□□□ 0.26
VSX1-201ENST00000376707 FKBP14Q9NWM8 211 aa16.69■□□□□ 0.26
VSX1-201ENST00000376707 A0A1W2PPE3 182 aa16.68■□□□□ 0.26
VSX1-201ENST00000376707 GEMIN2O14893 280 aaKnown RBP16.68■□□□□ 0.26
VSX1-201ENST00000376707 MPIG6BO95866 241 aa16.68■□□□□ 0.26
VSX1-201ENST00000376707 IGKV1D-33P01593 117 aa16.68■□□□□ 0.26
VSX1-201ENST00000376707 IGKV1-33P01594 117 aa16.68■□□□□ 0.26
VSX1-201ENST00000376707 ATAD3CQ5T2N8 411 aa16.68■□□□□ 0.26
VSX1-201ENST00000376707 AHSA2Q719I0 299 aa16.68■□□□□ 0.26
VSX1-201ENST00000376707 ZNF329Q86UD4 541 aa16.68■□□□□ 0.26
VSX1-201ENST00000376707 CDH26Q8IXH8 852 aa16.68■□□□□ 0.26
VSX1-201ENST00000376707 C5orf56Q8N8D9 126 aa16.68■□□□□ 0.26
VSX1-201ENST00000376707 NEK7Q8TDX7 302 aa16.68■□□□□ 0.26
VSX1-201ENST00000376707 TFAP2CQ92754 450 aa16.68■□□□□ 0.26
VSX1-201ENST00000376707 OR14A2Q96R54 314 aa16.68■□□□□ 0.26
VSX1-201ENST00000376707 SERPINE3A8MV23 424 aa16.67■□□□□ 0.26
VSX1-201ENST00000376707 HSD17B6O14756 317 aa16.67■□□□□ 0.26
VSX1-201ENST00000376707 FGF16O43320 207 aa16.67■□□□□ 0.26
VSX1-201ENST00000376707 DUS4LO95620 317 aaKnown RBP16.67■□□□□ 0.26
VSX1-201ENST00000376707 GTF2F2P13984 249 aa16.67■□□□□ 0.26
VSX1-201ENST00000376707 WNT4P56705 351 aa16.67■□□□□ 0.26
VSX1-201ENST00000376707 DOC2BQ14184 412 aa16.67■□□□□ 0.26
VSX1-201ENST00000376707 GPR176Q14439 515 aa16.67■□□□□ 0.26
VSX1-201ENST00000376707 SLC22A6Q4U2R8 563 aa16.67■□□□□ 0.26
VSX1-201ENST00000376707 STX19Q8N4C7 294 aa16.67■□□□□ 0.26
VSX1-201ENST00000376707 CHPT1Q8WUD6 406 aa16.67■□□□□ 0.26
VSX1-201ENST00000376707 ARL11Q969Q4 196 aa16.67■□□□□ 0.26
VSX1-201ENST00000376707 DERL3Q96Q80 235 aa16.67■□□□□ 0.26
VSX1-201ENST00000376707 A0A1W2PP11 408 aa16.66■□□□□ 0.26
VSX1-201ENST00000376707 CCRL2O00421 344 aa16.66■□□□□ 0.26
VSX1-201ENST00000376707 SDCBPO00560 298 aaPredicted RBP16.66■□□□□ 0.26
VSX1-201ENST00000376707 MYL12BO14950 172 aa16.66■□□□□ 0.26
VSX1-201ENST00000376707 GAPDHP04406 335 aaKnown RBP16.66■□□□□ 0.26
VSX1-201ENST00000376707 CELP19835 753 aa16.66■□□□□ 0.26
VSX1-201ENST00000376707 MOB3BQ86TA1 216 aa16.66■□□□□ 0.26
VSX1-201ENST00000376707 LYPD6Q86Y78 171 aa16.66■□□□□ 0.26
VSX1-201ENST00000376707 NANOGP1Q8N7R0 232 aa16.66■□□□□ 0.26
VSX1-201ENST00000376707 BPIFB6Q8NFQ5 453 aa16.66■□□□□ 0.26
VSX1-201ENST00000376707 OR51D1Q8NGF3 324 aa16.66■□□□□ 0.26
VSX1-201ENST00000376707 CCDC107Q8WV48 283 aa16.66■□□□□ 0.26
VSX1-201ENST00000376707 MRPS24Q96EL2 167 aaKnown RBP16.66■□□□□ 0.26
VSX1-201ENST00000376707 NOL4LQ96MY1 436 aaPredicted RBP16.66■□□□□ 0.26
VSX1-201ENST00000376707 VCXQ9H320 206 aa16.66■□□□□ 0.26
VSX1-201ENST00000376707 A0A1W2PPK0 400 aa16.65■□□□□ 0.26
VSX1-201ENST00000376707 REG1BP48304 166 aa16.65■□□□□ 0.26
VSX1-201ENST00000376707 ZNF816Q0VGE8 651 aaPredicted RBP16.65■□□□□ 0.26
VSX1-201ENST00000376707 RNLSQ5VYX0 342 aa16.65■□□□□ 0.26
VSX1-201ENST00000376707 SLC35E3Q7Z769 313 aa16.65■□□□□ 0.26
VSX1-201ENST00000376707 OR52M1Q8NGK5 317 aa16.65■□□□□ 0.26
VSX1-201ENST00000376707 UBALD1Q8TB05 177 aa16.65■□□□□ 0.26
VSX1-201ENST00000376707 THRSPQ92748 146 aa16.65■□□□□ 0.26
VSX1-201ENST00000376707 DCLRE1BQ9H816 532 aa16.65■□□□□ 0.26
VSX1-201ENST00000376707 RCC2Q9P258 522 aaKnown RBP16.65■□□□□ 0.26
VSX1-201ENST00000376707 MRPS28Q9Y2Q9 187 aaKnown RBP16.65■□□□□ 0.26
VSX1-201ENST00000376707 IGHV1-3A0A0C4DH29 117 aa16.64■□□□□ 0.25
VSX1-201ENST00000376707 PNMA8CA0A1B0GUJ8 204 aa16.64■□□□□ 0.25
VSX1-201ENST00000376707 C15orf65H3BRN8 121 aa16.64■□□□□ 0.25
VSX1-201ENST00000376707 RPL23AP62750 156 aaKnown RBP16.64■□□□□ 0.25
VSX1-201ENST00000376707 SLC35B1P78383 322 aa16.64■□□□□ 0.25
VSX1-201ENST00000376707 ZNF497Q6ZNH5 498 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms