RNA–Protein interactions for RNA: ENST00000376634.8

VPS13A-204, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 10,269 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-204ENST00000376634 PLP1P60201 277 aa11.04□□□□□ -0.64
VPS13A-204ENST00000376634 ZNF273Q14593 569 aa11.04□□□□□ -0.64
VPS13A-204ENST00000376634 SYT8Q8NBV8 401 aa11.04□□□□□ -0.64
VPS13A-204ENST00000376634 MTFP1Q9UDX5 166 aa11.04□□□□□ -0.64
VPS13A-204ENST00000376634 FBXL17Q9UF56 701 aa11.04□□□□□ -0.64
VPS13A-204ENST00000376634 CA2P00918 260 aa11.04□□□□□ -0.64
VPS13A-204ENST00000376634 NMUP48645 174 aa11.04□□□□□ -0.64
VPS13A-204ENST00000376634 C2CD4DB7Z1M9 353 aa11.04□□□□□ -0.64
VPS13A-204ENST00000376634 H3BMH7 237 aa11.04□□□□□ -0.64
VPS13A-204ENST00000376634 SMPD2O60906 423 aa11.04□□□□□ -0.64
VPS13A-204ENST00000376634 TSPAN13O95857 204 aa11.04□□□□□ -0.64
VPS13A-204ENST00000376634 SIGIRRQ6IA17 410 aa11.04□□□□□ -0.64
VPS13A-204ENST00000376634 HPXP02790 462 aa11.04□□□□□ -0.64
VPS13A-204ENST00000376634 ZNF32P17041 273 aa11.04□□□□□ -0.64
VPS13A-204ENST00000376634 WNT3P56703 355 aa11.04□□□□□ -0.64
VPS13A-204ENST00000376634 SCAND1P57086 179 aa11.04□□□□□ -0.64
VPS13A-204ENST00000376634 PRR7Q8TB68 274 aa11.04□□□□□ -0.64
VPS13A-204ENST00000376634 PITPNC1Q9UKF7 332 aa11.04□□□□□ -0.64
VPS13A-204ENST00000376634 PRNDQ9UKY0 176 aa11.04□□□□□ -0.64
VPS13A-204ENST00000376634 SFT2D2O95562 160 aa11.03□□□□□ -0.64
VPS13A-204ENST00000376634 MRM1Q6IN84 353 aaKnown RBP11.03□□□□□ -0.64
VPS13A-204ENST00000376634 DPPA3Q6W0C5 159 aa11.03□□□□□ -0.64
VPS13A-204ENST00000376634 CARFQ8N187 725 aa11.03□□□□□ -0.64
VPS13A-204ENST00000376634 SSMEM1Q8WWF3 244 aa11.03□□□□□ -0.64
VPS13A-204ENST00000376634 ASB1Q9Y576 335 aa11.03□□□□□ -0.64
VPS13A-204ENST00000376634 GREB1LQ9C091 1923 aaPredicted RBP11.03□□□□□ -0.64
VPS13A-204ENST00000376634 C9orf172C9J069 976 aa11.03□□□□□ -0.64
VPS13A-204ENST00000376634 SKP2Q13309 424 aa11.03□□□□□ -0.64
VPS13A-204ENST00000376634 TMEM240Q5SV17 173 aa11.03□□□□□ -0.64
VPS13A-204ENST00000376634 FAHD2BQ6P2I3 314 aaPredicted RBP11.03□□□□□ -0.64
VPS13A-204ENST00000376634 FAHD2AQ96GK7 314 aa11.03□□□□□ -0.64
VPS13A-204ENST00000376634 APELAP0DMC3 54 aa11.03□□□□□ -0.64
VPS13A-204ENST00000376634 SPANXN1Q5VSR9 72 aa11.03□□□□□ -0.64
VPS13A-204ENST00000376634 LOC107984156A0A0G2JMH3 177 aa11.03□□□□□ -0.64
VPS13A-204ENST00000376634 GABRA6Q16445 453 aa11.03□□□□□ -0.64
VPS13A-204ENST00000376634 ST3GAL2Q16842 350 aa11.03□□□□□ -0.64
VPS13A-204ENST00000376634 AWAT1Q58HT5 328 aa11.03□□□□□ -0.64
VPS13A-204ENST00000376634 LINC00596Q86U02 117 aa11.03□□□□□ -0.64
VPS13A-204ENST00000376634 ARL17AQ8IVW1 177 aa11.03□□□□□ -0.64
VPS13A-204ENST00000376634 WDR13Q9H1Z4 485 aa11.03□□□□□ -0.64
VPS13A-204ENST00000376634 PLPP2O43688 288 aa11.03□□□□□ -0.64
VPS13A-204ENST00000376634 WNT1P04628 370 aa11.03□□□□□ -0.64
VPS13A-204ENST00000376634 ARG1P05089 322 aa11.03□□□□□ -0.64
VPS13A-204ENST00000376634 CCL2P13500 99 aa11.03□□□□□ -0.64
VPS13A-204ENST00000376634 PDCD1Q15116 288 aa11.03□□□□□ -0.64
VPS13A-204ENST00000376634 PSG5Q15238 335 aa11.03□□□□□ -0.64
VPS13A-204ENST00000376634 DNLZQ5SXM8 178 aa11.03□□□□□ -0.64
VPS13A-204ENST00000376634 Q6ZNB5 142 aa11.03□□□□□ -0.64
VPS13A-204ENST00000376634 ZNF707Q96C28 371 aaPredicted RBP11.03□□□□□ -0.64
VPS13A-204ENST00000376634 ZNF275Q9NSD4 429 aaPredicted RBP11.03□□□□□ -0.64
VPS13A-204ENST00000376634 DNAJB12Q9NXW2 375 aaKnown RBP11.03□□□□□ -0.64
VPS13A-204ENST00000376634 PIPOXQ9P0Z9 390 aa11.03□□□□□ -0.64
VPS13A-204ENST00000376634 MRPS16Q9Y3D3 137 aaKnown RBP11.03□□□□□ -0.64
VPS13A-204ENST00000376634 CEACAM5P06731 702 aa11.03□□□□□ -0.64
VPS13A-204ENST00000376634 HLA-DRB3P79483 266 aa11.03□□□□□ -0.64
VPS13A-204ENST00000376634 TM4SF20Q53R12 229 aa11.03□□□□□ -0.64
VPS13A-204ENST00000376634 SLC25A33Q9BSK2 321 aa11.03□□□□□ -0.64
VPS13A-204ENST00000376634 KLK8O60259 260 aa11.03□□□□□ -0.64
VPS13A-204ENST00000376634 ZNF738Q8NE65 137 aa11.03□□□□□ -0.64
VPS13A-204ENST00000376634 DIRC3C9JPN6 131 aa11.03□□□□□ -0.64
VPS13A-204ENST00000376634 PTOV1Q86YD1 416 aa11.03□□□□□ -0.64
VPS13A-204ENST00000376634 NUP37Q8NFH4 326 aa11.03□□□□□ -0.64
VPS13A-204ENST00000376634 Q8WTZ3 238 aa11.03□□□□□ -0.64
VPS13A-204ENST00000376634 CNTD2Q9H8S5 307 aa11.03□□□□□ -0.64
VPS13A-204ENST00000376634 SIGLEC7Q9Y286 467 aa11.03□□□□□ -0.64
VPS13A-204ENST00000376634 PLXNB3Q9ULL4 1909 aa11.02□□□□□ -0.64
VPS13A-204ENST00000376634 PLPP3O14495 311 aa11.02□□□□□ -0.64
VPS13A-204ENST00000376634 CD81P60033 236 aa11.02□□□□□ -0.64
VPS13A-204ENST00000376634 VN1R17PQ8TDU5 208 aa11.02□□□□□ -0.64
VPS13A-204ENST00000376634 GABRA1P14867 456 aa11.02□□□□□ -0.64
VPS13A-204ENST00000376634 SLC25A40Q8TBP6 338 aa11.02□□□□□ -0.64
VPS13A-204ENST00000376634 GHITMQ9H3K2 345 aa11.02□□□□□ -0.64
VPS13A-204ENST00000376634 LOC389332A0A1B0GUA5 103 aa11.02□□□□□ -0.65
VPS13A-204ENST00000376634 OR2W5A6NFC9 320 aa11.02□□□□□ -0.65
VPS13A-204ENST00000376634 HMSDA8MTL9 139 aa11.02□□□□□ -0.65
VPS13A-204ENST00000376634 ACER2Q5QJU3 275 aa11.02□□□□□ -0.65
VPS13A-204ENST00000376634 CADM4Q8NFZ8 388 aa11.02□□□□□ -0.65
VPS13A-204ENST00000376634 M0R296 226 aa11.02□□□□□ -0.65
VPS13A-204ENST00000376634 CCDC144NLQ6NUI1 221 aa11.02□□□□□ -0.65
VPS13A-204ENST00000376634 SLC16A13Q7RTY0 426 aa11.02□□□□□ -0.65
VPS13A-204ENST00000376634 C16orf82Q7Z2V1 217 aa11.02□□□□□ -0.65
VPS13A-204ENST00000376634 ANKRD37Q7Z713 158 aa11.02□□□□□ -0.65
VPS13A-204ENST00000376634 ZNF502Q8TBZ5 544 aa11.02□□□□□ -0.65
VPS13A-204ENST00000376634 CNRIP1Q96F85 164 aaPredicted RBP11.02□□□□□ -0.65
VPS13A-204ENST00000376634 METTL26Q96S19 204 aa11.02□□□□□ -0.65
VPS13A-204ENST00000376634 SIRT5Q9NXA8 310 aa11.02□□□□□ -0.65
VPS13A-204ENST00000376634 MYF5P13349 255 aa11.02□□□□□ -0.65
VPS13A-204ENST00000376634 FZD5Q13467 585 aa11.02□□□□□ -0.65
VPS13A-204ENST00000376634 ZNF519Q8TB69 540 aa11.02□□□□□ -0.65
VPS13A-204ENST00000376634 ASB10Q8WXI3 467 aa11.02□□□□□ -0.65
VPS13A-204ENST00000376634 SIRT7Q9NRC8 400 aa11.02□□□□□ -0.65
VPS13A-204ENST00000376634 PRSS50Q9UI38 385 aa11.02□□□□□ -0.65
VPS13A-204ENST00000376634 SPTY2D1-AS1A0A0U1RR47 76 aa11.02□□□□□ -0.65
VPS13A-204ENST00000376634 MEX3AA1L020 520 aaKnown RBP11.02□□□□□ -0.65
VPS13A-204ENST00000376634 FAM222BQ8WU58 562 aa11.02□□□□□ -0.65
VPS13A-204ENST00000376634 FGF14Q92915 247 aa11.02□□□□□ -0.65
VPS13A-204ENST00000376634 HMX2A2RU54 273 aa11.02□□□□□ -0.65
VPS13A-204ENST00000376634 DLK1P80370 383 aa11.02□□□□□ -0.65
VPS13A-204ENST00000376634 SLC35E3Q7Z769 313 aa11.02□□□□□ -0.65
VPS13A-204ENST00000376634 TSPO2Q5TGU0 170 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms