RNA–Protein interactions for RNA: ENST00000376259.6

TNFRSF1B-201, Transcript of TNF receptor superfamily member 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1B, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-201ENST00000376259 FAM3AP98173 230 aa12.41□□□□□ -0.42
TNFRSF1B-201ENST00000376259 SPEM2Q0P670 501 aa12.41□□□□□ -0.42
TNFRSF1B-201ENST00000376259 PCOLCEQ15113 449 aa12.41□□□□□ -0.42
TNFRSF1B-201ENST00000376259 LFNGQ8NES3 379 aa12.41□□□□□ -0.42
TNFRSF1B-201ENST00000376259 OIT3Q8WWZ8 545 aa12.41□□□□□ -0.42
TNFRSF1B-201ENST00000376259 ADGRG7Q96K78 797 aa12.41□□□□□ -0.42
TNFRSF1B-201ENST00000376259 SSX3Q99909 188 aa12.41□□□□□ -0.42
TNFRSF1B-201ENST00000376259 GPR35Q9HC97 309 aa12.41□□□□□ -0.42
TNFRSF1B-201ENST00000376259 SEC11BP0C7V7 166 aa12.41□□□□□ -0.42
TNFRSF1B-201ENST00000376259 IL13RA2Q14627 380 aa12.41□□□□□ -0.42
TNFRSF1B-201ENST00000376259 NTNG2Q96CW9 530 aa12.41□□□□□ -0.42
TNFRSF1B-201ENST00000376259 HS3ST6Q96QI5 342 aa12.41□□□□□ -0.42
TNFRSF1B-201ENST00000376259 TMEM204Q9BSN7 226 aa12.41□□□□□ -0.42
TNFRSF1B-201ENST00000376259 PMS2P1A4D2B8 440 aa12.4□□□□□ -0.42
TNFRSF1B-201ENST00000376259 CLEC18AA5D8T8 446 aa12.4□□□□□ -0.42
TNFRSF1B-201ENST00000376259 NAT2P11245 290 aa12.4□□□□□ -0.42
TNFRSF1B-201ENST00000376259 CD200P41217 278 aa12.4□□□□□ -0.42
TNFRSF1B-201ENST00000376259 SRPXP78539 464 aa12.4□□□□□ -0.42
TNFRSF1B-201ENST00000376259 BTNL8Q6UX41 500 aa12.4□□□□□ -0.42
TNFRSF1B-201ENST00000376259 ZNF610Q8N9Z0 462 aa12.4□□□□□ -0.42
TNFRSF1B-201ENST00000376259 CLEC18CQ8NCF0 446 aa12.4□□□□□ -0.42
TNFRSF1B-201ENST00000376259 TVP23CQ96ET8 276 aa12.4□□□□□ -0.42
TNFRSF1B-201ENST00000376259 PRDM6Q9NQX0 595 aa12.4□□□□□ -0.42
TNFRSF1B-201ENST00000376259 IGKV1D-13A0A0B4J2D9 117 aa12.4□□□□□ -0.42
TNFRSF1B-201ENST00000376259 CDIPTO14735 213 aa12.4□□□□□ -0.42
TNFRSF1B-201ENST00000376259 SERPINA7P05543 415 aa12.4□□□□□ -0.42
TNFRSF1B-201ENST00000376259 DANCRP0C864 163 aa12.4□□□□□ -0.42
TNFRSF1B-201ENST00000376259 IGKV1-13P0DP09 117 aa12.4□□□□□ -0.42
TNFRSF1B-201ENST00000376259 MRPL41Q8IXM3 137 aaKnown RBP12.4□□□□□ -0.42
TNFRSF1B-201ENST00000376259 CLDN23Q96B33 292 aa12.4□□□□□ -0.42
TNFRSF1B-201ENST00000376259 GFOD1Q9NXC2 390 aa12.4□□□□□ -0.42
TNFRSF1B-201ENST00000376259 PTGDSP41222 190 aa12.4□□□□□ -0.43
TNFRSF1B-201ENST00000376259 LHFPL1Q86WI0 220 aa12.4□□□□□ -0.43
TNFRSF1B-201ENST00000376259 OR2Y1Q8NGV0 311 aa12.4□□□□□ -0.43
TNFRSF1B-201ENST00000376259 TFF1P04155 84 aa12.39□□□□□ -0.43
TNFRSF1B-201ENST00000376259 DEFA4P12838 97 aa12.39□□□□□ -0.43
TNFRSF1B-201ENST00000376259 CEACAM6P40199 344 aa12.39□□□□□ -0.43
TNFRSF1B-201ENST00000376259 ZNF383Q8NA42 475 aa12.39□□□□□ -0.43
TNFRSF1B-201ENST00000376259 GNPNAT1Q96EK6 184 aaPredicted RBP12.39□□□□□ -0.43
TNFRSF1B-201ENST00000376259 WNT5BQ9H1J7 359 aa12.39□□□□□ -0.43
TNFRSF1B-201ENST00000376259 ZNF552Q9H707 407 aaPredicted RBP12.39□□□□□ -0.43
TNFRSF1B-201ENST00000376259 LOXL2Q9Y4K0 774 aa12.39□□□□□ -0.43
TNFRSF1B-201ENST00000376259 FREM2Q5SZK8 3169 aa12.39□□□□□ -0.43
TNFRSF1B-201ENST00000376259 ARGFXA6NJG6 315 aa12.39□□□□□ -0.43
TNFRSF1B-201ENST00000376259 ZNF705FA8MVS1 300 aaPredicted RBP12.39□□□□□ -0.43
TNFRSF1B-201ENST00000376259 LYZL6O75951 148 aa12.39□□□□□ -0.43
TNFRSF1B-201ENST00000376259 IFNA1P01562 189 aa12.39□□□□□ -0.43
TNFRSF1B-201ENST00000376259 HBE1P02100 147 aa12.39□□□□□ -0.43
TNFRSF1B-201ENST00000376259 ZNF705DP0CH99 300 aaPredicted RBP12.39□□□□□ -0.43
TNFRSF1B-201ENST00000376259 ZNF705BP0CI00 300 aaPredicted RBP12.39□□□□□ -0.43
TNFRSF1B-201ENST00000376259 EGR1P18146 543 aa12.39□□□□□ -0.43
TNFRSF1B-201ENST00000376259 RAB4BP61018 213 aa12.39□□□□□ -0.43
TNFRSF1B-201ENST00000376259 RNF212Q495C1 297 aa12.39□□□□□ -0.43
TNFRSF1B-201ENST00000376259 OR1A1Q9P1Q5 309 aa12.39□□□□□ -0.43
TNFRSF1B-201ENST00000376259 IFNA10P01566 189 aa12.39□□□□□ -0.43
TNFRSF1B-201ENST00000376259 CHRNA7P36544 502 aa12.39□□□□□ -0.43
TNFRSF1B-201ENST00000376259 DMBX1Q8NFW5 382 aa12.39□□□□□ -0.43
TNFRSF1B-201ENST00000376259 DOK5Q9P104 306 aa12.39□□□□□ -0.43
TNFRSF1B-201ENST00000376259 GNG12Q9UBI6 72 aa12.39□□□□□ -0.43
TNFRSF1B-201ENST00000376259 TIMM8BQ9Y5J9 83 aaPredicted RBP12.39□□□□□ -0.43
TNFRSF1B-201ENST00000376259 POMT1Q9Y6A1 747 aa12.39□□□□□ -0.43
TNFRSF1B-201ENST00000376259 PIEZO2Q9H5I5 2752 aa12.38□□□□□ -0.43
TNFRSF1B-201ENST00000376259 TRDCB7Z8K6 153 aa12.38□□□□□ -0.43
TNFRSF1B-201ENST00000376259 CLN5O75503 358 aa12.38□□□□□ -0.43
TNFRSF1B-201ENST00000376259 VDAC1P21796 283 aa12.38□□□□□ -0.43
TNFRSF1B-201ENST00000376259 EDDM3BP56851 147 aa12.38□□□□□ -0.43
TNFRSF1B-201ENST00000376259 HBG1P69891 147 aa12.38□□□□□ -0.43
TNFRSF1B-201ENST00000376259 HBG2P69892 147 aa12.38□□□□□ -0.43
TNFRSF1B-201ENST00000376259 LILRB1Q8NHL6 650 aaPredicted RBP12.38□□□□□ -0.43
TNFRSF1B-201ENST00000376259 FAM210BQ96KR6 192 aa12.38□□□□□ -0.43
TNFRSF1B-201ENST00000376259 ZNF251Q9BRH9 671 aa12.38□□□□□ -0.43
TNFRSF1B-201ENST00000376259 GCM1Q9NP62 436 aa12.38□□□□□ -0.43
TNFRSF1B-201ENST00000376259 GSN-AS1Q9NRJ2 163 aa12.38□□□□□ -0.43
TNFRSF1B-201ENST00000376259 GTF3C1Q12789 2109 aa12.38□□□□□ -0.43
TNFRSF1B-201ENST00000376259 GAPDHP04406 335 aaKnown RBP12.38□□□□□ -0.43
TNFRSF1B-201ENST00000376259 HOXA4Q00056 320 aaPredicted RBP12.38□□□□□ -0.43
TNFRSF1B-201ENST00000376259 C1orf87Q8N0U7 546 aa12.38□□□□□ -0.43
TNFRSF1B-201ENST00000376259 IGHV1-45A0A0A0MS14 117 aa12.38□□□□□ -0.43
TNFRSF1B-201ENST00000376259 H7BYZ3 331 aa12.38□□□□□ -0.43
TNFRSF1B-201ENST00000376259 FKBP2P26885 142 aaKnown RBP12.38□□□□□ -0.43
TNFRSF1B-201ENST00000376259 FAM58AQ8N1B3 248 aa12.38□□□□□ -0.43
TNFRSF1B-201ENST00000376259 CPEB3Q8NE35 698 aaKnown RBP12.38□□□□□ -0.43
TNFRSF1B-201ENST00000376259 STRADBQ9C0K7 418 aa12.38□□□□□ -0.43
TNFRSF1B-201ENST00000376259 PLCE1Q9P212 2302 aa12.37□□□□□ -0.43
TNFRSF1B-201ENST00000376259 A0A1W2PPV4 95 aa12.37□□□□□ -0.43
TNFRSF1B-201ENST00000376259 SPINK4O60575 86 aa12.37□□□□□ -0.43
TNFRSF1B-201ENST00000376259 DFFBO76075 338 aa12.37□□□□□ -0.43
TNFRSF1B-201ENST00000376259 SRD5A2P31213 254 aa12.37□□□□□ -0.43
TNFRSF1B-201ENST00000376259 GFI1BQ5VTD9 330 aa12.37□□□□□ -0.43
TNFRSF1B-201ENST00000376259 FAM89BQ8N5H3 189 aa12.37□□□□□ -0.43
TNFRSF1B-201ENST00000376259 DEFB108BQ8NET1 73 aa12.37□□□□□ -0.43
TNFRSF1B-201ENST00000376259 EML6Q6ZMW3 1958 aa12.37□□□□□ -0.43
TNFRSF1B-201ENST00000376259 IGLV3-19P01714 112 aa12.37□□□□□ -0.43
TNFRSF1B-201ENST00000376259 DTYMKP23919 212 aa12.37□□□□□ -0.43
TNFRSF1B-201ENST00000376259 ZIC4Q8N9L1 334 aa12.37□□□□□ -0.43
TNFRSF1B-201ENST00000376259 MOB3AQ96BX8 217 aa12.37□□□□□ -0.43
TNFRSF1B-201ENST00000376259 POM121Q96HA1 1249 aa12.37□□□□□ -0.43
TNFRSF1B-201ENST00000376259 TMEM222Q9H0R3 208 aa12.37□□□□□ -0.43
TNFRSF1B-201ENST00000376259 PLA2G2EQ9NZK7 142 aa12.37□□□□□ -0.43
TNFRSF1B-201ENST00000376259 TCFL5Q9UL49 500 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms