RNA–Protein interactions for RNA: ENST00000375661.5

LSM2-208, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM2, Length 876 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-208ENST00000375661 TMEM59Q9BXS4 323 aa9.86□□□□□ -0.83
LSM2-208ENST00000375661 LIN7BQ9HAP6 207 aa9.86□□□□□ -0.83
LSM2-208ENST00000375661 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.86□□□□□ -0.83
LSM2-208ENST00000375661 RCC2Q9P258 522 aaKnown RBP9.86□□□□□ -0.83
LSM2-208ENST00000375661 DAPK2Q9UIK4 370 aa9.86□□□□□ -0.83
LSM2-208ENST00000375661 TRBV23-1A0A0A0MS06 115 aa9.85□□□□□ -0.83
LSM2-208ENST00000375661 MEIOCA2RUB1 952 aa9.85□□□□□ -0.83
LSM2-208ENST00000375661 FAM90A10PA6NDY2 464 aa9.85□□□□□ -0.83
LSM2-208ENST00000375661 FAM90A18PA6NE21 464 aa9.85□□□□□ -0.83
LSM2-208ENST00000375661 FAM90A16PA6NEW6 464 aa9.85□□□□□ -0.83
LSM2-208ENST00000375661 FAM90A20PA6NIJ5 464 aa9.85□□□□□ -0.83
LSM2-208ENST00000375661 FAM90A8PA6NJQ4 464 aa9.85□□□□□ -0.83
LSM2-208ENST00000375661 FAM90A7PA6NKC0 464 aa9.85□□□□□ -0.83
LSM2-208ENST00000375661 FOXI3A8MTJ6 420 aaPredicted RBP9.85□□□□□ -0.83
LSM2-208ENST00000375661 FAM90A22PA8MWA6 464 aa9.85□□□□□ -0.83
LSM2-208ENST00000375661 FAM90A12PA8MX19 464 aa9.85□□□□□ -0.83
LSM2-208ENST00000375661 FAM90A5PA8MXJ8 464 aa9.85□□□□□ -0.83
LSM2-208ENST00000375661 FAM90A23PA8MXZ1 464 aa9.85□□□□□ -0.83
LSM2-208ENST00000375661 H3BUX3 64 aa9.85□□□□□ -0.83
LSM2-208ENST00000375661 PRB2P02812 416 aaPredicted RBP9.85□□□□□ -0.83
LSM2-208ENST00000375661 FAM90A15PP0C7V4 464 aa9.85□□□□□ -0.83
LSM2-208ENST00000375661 FAM90A13PP0C7W8 464 aa9.85□□□□□ -0.83
LSM2-208ENST00000375661 FAM90A14PP0C7W9 464 aa9.85□□□□□ -0.83
LSM2-208ENST00000375661 FAM90A24PP0C7X0 464 aa9.85□□□□□ -0.83
LSM2-208ENST00000375661 ERP29P30040 261 aaKnown RBP9.85□□□□□ -0.83
LSM2-208ENST00000375661 AESQ08117 197 aa9.85□□□□□ -0.83
LSM2-208ENST00000375661 EDDM3AQ14507 147 aa9.85□□□□□ -0.83
LSM2-208ENST00000375661 PAN3Q58A45 887 aaKnown RBP9.85□□□□□ -0.83
LSM2-208ENST00000375661 LIAT1Q6ZQX7 453 aa9.85□□□□□ -0.83
LSM2-208ENST00000375661 RTN4RL2Q86UN3 420 aa9.85□□□□□ -0.83
LSM2-208ENST00000375661 FAM89BQ8N5H3 189 aa9.85□□□□□ -0.83
LSM2-208ENST00000375661 TPRX1Q8N7U7 411 aa9.85□□□□□ -0.83
LSM2-208ENST00000375661 NDNFQ8TB73 568 aa9.85□□□□□ -0.83
LSM2-208ENST00000375661 PLPPR1Q8TBJ4 325 aa9.85□□□□□ -0.83
LSM2-208ENST00000375661 COQ2Q96H96 371 aa9.85□□□□□ -0.83
LSM2-208ENST00000375661 SSX3Q99909 188 aa9.85□□□□□ -0.83
LSM2-208ENST00000375661 DPCDQ9BVM2 203 aaPredicted RBP9.85□□□□□ -0.83
LSM2-208ENST00000375661 BARHL1Q9BZE3 327 aa9.85□□□□□ -0.83
LSM2-208ENST00000375661 METTL8Q9H825 291 aaKnown RBP9.85□□□□□ -0.83
LSM2-208ENST00000375661 CEPT1Q9Y6K0 416 aa9.85□□□□□ -0.83
LSM2-208ENST00000375661 HSPB6O14558 160 aa9.84□□□□□ -0.83
LSM2-208ENST00000375661 CSN2P05814 226 aa9.84□□□□□ -0.83
LSM2-208ENST00000375661 SNRPBP14678 240 aaKnown RBP9.84□□□□□ -0.83
LSM2-208ENST00000375661 RANBP1P43487 201 aa9.84□□□□□ -0.83
LSM2-208ENST00000375661 GLIPR1P48060 266 aa9.84□□□□□ -0.83
LSM2-208ENST00000375661 TMBIM6P55061 237 aa9.84□□□□□ -0.83
LSM2-208ENST00000375661 P2RX3P56373 397 aa9.84□□□□□ -0.83
LSM2-208ENST00000375661 EDDM3BP56851 147 aa9.84□□□□□ -0.83
LSM2-208ENST00000375661 RPL31P62899 125 aaKnown RBP9.84□□□□□ -0.83
LSM2-208ENST00000375661 KLRD1Q13241 179 aa9.84□□□□□ -0.83
LSM2-208ENST00000375661 BLMHQ13867 455 aa9.84□□□□□ -0.83
LSM2-208ENST00000375661 ZNF273Q14593 569 aa9.84□□□□□ -0.83
LSM2-208ENST00000375661 ATXN7L3Q14CW9 347 aaPredicted RBP9.84□□□□□ -0.83
LSM2-208ENST00000375661 ATAD3CQ5T2N8 411 aa9.84□□□□□ -0.83
LSM2-208ENST00000375661 IDNKQ5T6J7 187 aa9.84□□□□□ -0.83
LSM2-208ENST00000375661 TMEM200BQ69YZ2 307 aa9.84□□□□□ -0.83
LSM2-208ENST00000375661 GDPD3Q7L5L3 318 aa9.84□□□□□ -0.83
LSM2-208ENST00000375661 TCF23Q7RTU1 214 aa9.84□□□□□ -0.83
LSM2-208ENST00000375661 FAM185AQ8N0U4 392 aa9.84□□□□□ -0.83
LSM2-208ENST00000375661 KLHDC1Q8N7A1 406 aa9.84□□□□□ -0.83
LSM2-208ENST00000375661 OR5H6Q8NGV6 325 aa9.84□□□□□ -0.83
LSM2-208ENST00000375661 SLC25A46Q96AG3 418 aa9.84□□□□□ -0.83
LSM2-208ENST00000375661 URM1Q9BTM9 101 aaKnown RBP9.84□□□□□ -0.83
LSM2-208ENST00000375661 MEGF9Q9H1U4 602 aa9.84□□□□□ -0.83
LSM2-208ENST00000375661 SPACA1Q9HBV2 294 aa9.84□□□□□ -0.83
LSM2-208ENST00000375661 AURKAIP1Q9NWT8 199 aaPredicted RBP9.84□□□□□ -0.83
LSM2-208ENST00000375661 RAB22AQ9UL26 194 aa9.84□□□□□ -0.83
LSM2-208ENST00000375661 A0A1W2PRD5 423 aa9.83□□□□□ -0.84
LSM2-208ENST00000375661 A0A1W2PRF3 423 aa9.83□□□□□ -0.84
LSM2-208ENST00000375661 A0A1W2PRM7 423 aa9.83□□□□□ -0.84
LSM2-208ENST00000375661 MEX3AA1L020 520 aaKnown RBP9.83□□□□□ -0.84
LSM2-208ENST00000375661 SOCS1O15524 211 aa9.83□□□□□ -0.84
LSM2-208ENST00000375661 PDCD6O75340 191 aa9.83□□□□□ -0.84
LSM2-208ENST00000375661 RAB6AP20340 208 aa9.83□□□□□ -0.84
LSM2-208ENST00000375661 FUT3P21217 361 aa9.83□□□□□ -0.84
LSM2-208ENST00000375661 CHATP28329 748 aa9.83□□□□□ -0.84
LSM2-208ENST00000375661 KCNJ3P48549 501 aa9.83□□□□□ -0.84
LSM2-208ENST00000375661 TMEM50BP56557 158 aa9.83□□□□□ -0.84
LSM2-208ENST00000375661 PAX5Q02548 391 aa9.83□□□□□ -0.84
LSM2-208ENST00000375661 SPCS2Q15005 226 aa9.83□□□□□ -0.84
LSM2-208ENST00000375661 LRRC75BQ2VPJ9 315 aa9.83□□□□□ -0.84
LSM2-208ENST00000375661 MOGAT2Q3SYC2 334 aa9.83□□□□□ -0.84
LSM2-208ENST00000375661 OXLD1Q5BKU9 147 aa9.83□□□□□ -0.84
LSM2-208ENST00000375661 VAX1Q5SQQ9 334 aa9.83□□□□□ -0.84
LSM2-208ENST00000375661 RSBN1Q5VWQ0 802 aaPredicted RBP9.83□□□□□ -0.84
LSM2-208ENST00000375661 RAB12Q6IQ22 244 aa9.83□□□□□ -0.84
LSM2-208ENST00000375661 CROCCP3Q8IVE0 287 aa9.83□□□□□ -0.84
LSM2-208ENST00000375661 C11orf42Q8N5U0 333 aa9.83□□□□□ -0.84
LSM2-208ENST00000375661 OR4F17Q8NGA8 305 aa9.83□□□□□ -0.84
LSM2-208ENST00000375661 LGALS14Q8TCE9 139 aa9.83□□□□□ -0.84
LSM2-208ENST00000375661 RAB2BQ8WUD1 216 aa9.83□□□□□ -0.84
LSM2-208ENST00000375661 PTX4Q96A99 478 aa9.83□□□□□ -0.84
LSM2-208ENST00000375661 OR4F4Q96R69 305 aa9.83□□□□□ -0.84
LSM2-208ENST00000375661 BCL7BQ9BQE9 202 aa9.83□□□□□ -0.84
LSM2-208ENST00000375661 NPFFR1Q9GZQ6 430 aa9.83□□□□□ -0.84
LSM2-208ENST00000375661 RBM38Q9H0Z9 239 aaKnown RBP9.83□□□□□ -0.84
LSM2-208ENST00000375661 DCSTAMPQ9H295 470 aa9.83□□□□□ -0.84
LSM2-208ENST00000375661 ING3Q9NXR8 418 aa9.83□□□□□ -0.84
LSM2-208ENST00000375661 SIGLEC9Q9Y336 463 aa9.83□□□□□ -0.84
LSM2-208ENST00000375661 PEX16Q9Y5Y5 336 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms