RNA–Protein interactions for RNA: ENST00000375023.3

NOTCH4-201, Transcript of notch 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH4, Length 6,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4-201ENST00000375023 OR5B21A6NL26 309 aa12.88□□□□□ -0.35
NOTCH4-201ENST00000375023 PRR35P0CG20 571 aa12.88□□□□□ -0.35
NOTCH4-201ENST00000375023 COL8A1P27658 744 aa12.88□□□□□ -0.35
NOTCH4-201ENST00000375023 CCKARP32238 428 aa12.88□□□□□ -0.35
NOTCH4-201ENST00000375023 NUFIP2Q7Z417 695 aaKnown RBP12.88□□□□□ -0.35
NOTCH4-201ENST00000375023 OR5A2Q8NGI9 324 aa12.88□□□□□ -0.35
NOTCH4-201ENST00000375023 ZPLD1Q8TCW7 415 aa12.88□□□□□ -0.35
NOTCH4-201ENST00000375023 MDC1Q14676 2089 aaKnown RBP12.88□□□□□ -0.35
NOTCH4-201ENST00000375023 IGLV3-16A0A075B6K0 115 aa12.88□□□□□ -0.35
NOTCH4-201ENST00000375023 MELTFP08582 738 aa12.88□□□□□ -0.35
NOTCH4-201ENST00000375023 ZNF770Q6IQ21 691 aaPredicted RBP12.88□□□□□ -0.35
NOTCH4-201ENST00000375023 OR6X1Q8NH79 312 aa12.88□□□□□ -0.35
NOTCH4-201ENST00000375023 ASB5Q8WWX0 329 aa12.88□□□□□ -0.35
NOTCH4-201ENST00000375023 PTP4A1Q93096 173 aa12.88□□□□□ -0.35
NOTCH4-201ENST00000375023 GAB4Q2WGN9 574 aa12.88□□□□□ -0.35
NOTCH4-201ENST00000375023 NKX2-6A6NCS4 301 aa12.88□□□□□ -0.35
NOTCH4-201ENST00000375023 INPP5JQ15735 1006 aaPredicted RBP12.88□□□□□ -0.35
NOTCH4-201ENST00000375023 C1orf185Q5T7R7 199 aa12.88□□□□□ -0.35
NOTCH4-201ENST00000375023 MOB1BQ7L9L4 216 aa12.88□□□□□ -0.35
NOTCH4-201ENST00000375023 CARFQ8N187 725 aa12.88□□□□□ -0.35
NOTCH4-201ENST00000375023 SCNM1Q9BWG6 230 aa12.88□□□□□ -0.35
NOTCH4-201ENST00000375023 SLC35B3Q9H1N7 401 aa12.88□□□□□ -0.35
NOTCH4-201ENST00000375023 SLC25A10Q9UBX3 287 aaPredicted RBP12.88□□□□□ -0.35
NOTCH4-201ENST00000375023 J3QR89 54 aa12.88□□□□□ -0.35
NOTCH4-201ENST00000375023 P01737 135 aa12.88□□□□□ -0.35
NOTCH4-201ENST00000375023 NAT2P11245 290 aa12.88□□□□□ -0.35
NOTCH4-201ENST00000375023 RANP62826 216 aaKnown RBP12.88□□□□□ -0.35
NOTCH4-201ENST00000375023 CDC20Q12834 499 aa12.88□□□□□ -0.35
NOTCH4-201ENST00000375023 DTD1Q8TEA8 209 aa12.88□□□□□ -0.35
NOTCH4-201ENST00000375023 COX14Q96I36 57 aa12.88□□□□□ -0.35
NOTCH4-201ENST00000375023 TRIP12Q14669 1992 aaPredicted RBP12.88□□□□□ -0.35
NOTCH4-201ENST00000375023 SCN2AQ99250 2005 aa12.88□□□□□ -0.35
NOTCH4-201ENST00000375023 ZIC1Q15915 447 aa12.88□□□□□ -0.35
NOTCH4-201ENST00000375023 GPX7Q96SL4 187 aaPredicted RBP12.88□□□□□ -0.35
NOTCH4-201ENST00000375023 ZNF665Q9H7R5 613 aa12.88□□□□□ -0.35
NOTCH4-201ENST00000375023 ZNF207O43670 478 aaKnown RBP12.87□□□□□ -0.35
NOTCH4-201ENST00000375023 GDF9O60383 454 aa12.87□□□□□ -0.35
NOTCH4-201ENST00000375023 PAGE4O60829 102 aa12.87□□□□□ -0.35
NOTCH4-201ENST00000375023 ZNF658BQ4V348 819 aaPredicted RBP12.87□□□□□ -0.35
NOTCH4-201ENST00000375023 C10orf113Q5VZT2 155 aa12.87□□□□□ -0.35
NOTCH4-201ENST00000375023 Q6ZN92 141 aa12.87□□□□□ -0.35
NOTCH4-201ENST00000375023 SSBP1Q04837 148 aaKnown RBP12.87□□□□□ -0.35
NOTCH4-201ENST00000375023 TTTY12Q9BZ98 90 aa12.87□□□□□ -0.35
NOTCH4-201ENST00000375023 SLC52A3Q9NQ40 469 aa12.87□□□□□ -0.35
NOTCH4-201ENST00000375023 SIGLEC5O15389 551 aa12.87□□□□□ -0.35
NOTCH4-201ENST00000375023 SRSF10O75494 262 aaKnown RBP12.87□□□□□ -0.35
NOTCH4-201ENST00000375023 C16orf82Q7Z2V1 217 aa12.87□□□□□ -0.35
NOTCH4-201ENST00000375023 C9orf40Q8IXQ3 194 aa12.87□□□□□ -0.35
NOTCH4-201ENST00000375023 GUCD1Q96NT3 240 aa12.87□□□□□ -0.35
NOTCH4-201ENST00000375023 GSX1Q9H4S2 264 aaPredicted RBP12.87□□□□□ -0.35
NOTCH4-201ENST00000375023 RBFOX3A6NFN3 312 aa12.87□□□□□ -0.35
NOTCH4-201ENST00000375023 FFAR1O14842 300 aa12.87□□□□□ -0.35
NOTCH4-201ENST00000375023 CIDEAO60543 219 aa12.87□□□□□ -0.35
NOTCH4-201ENST00000375023 SLC26A10Q8NG04 563 aa12.87□□□□□ -0.35
NOTCH4-201ENST00000375023 FAM216AQ8WUB2 273 aa12.87□□□□□ -0.35
NOTCH4-201ENST00000375023 LEAP2Q969E1 77 aa12.87□□□□□ -0.35
NOTCH4-201ENST00000375023 DUX5Q96PT3 197 aa12.87□□□□□ -0.35
NOTCH4-201ENST00000375023 CLDN14O95500 239 aa12.87□□□□□ -0.35
NOTCH4-201ENST00000375023 MESP2Q0VG99 397 aa12.87□□□□□ -0.35
NOTCH4-201ENST00000375023 LDLRAD3Q86YD5 345 aa12.87□□□□□ -0.35
NOTCH4-201ENST00000375023 OR4C12Q96R67 309 aa12.87□□□□□ -0.35
NOTCH4-201ENST00000375023 CISD1Q9NZ45 108 aaKnown RBP12.87□□□□□ -0.35
NOTCH4-201ENST00000375023 DOCK1Q14185 1865 aa12.86□□□□□ -0.35
NOTCH4-201ENST00000375023 HLA-GP17693 338 aa12.86□□□□□ -0.35
NOTCH4-201ENST00000375023 CXCL3P19876 107 aa12.86□□□□□ -0.35
NOTCH4-201ENST00000375023 EFNB2P52799 333 aa12.86□□□□□ -0.35
NOTCH4-201ENST00000375023 TWIST1Q15672 202 aa12.86□□□□□ -0.35
NOTCH4-201ENST00000375023 KRTCAP3Q53RY4 240 aa12.86□□□□□ -0.35
NOTCH4-201ENST00000375023 ABHD14BQ96IU4 210 aa12.86□□□□□ -0.35
NOTCH4-201ENST00000375023 TRAV8-7A0A075B6U6 113 aa12.86□□□□□ -0.35
NOTCH4-201ENST00000375023 OR2T8A6NH00 312 aa12.86□□□□□ -0.35
NOTCH4-201ENST00000375023 FBLL1A6NHQ2 334 aaKnown RBP12.86□□□□□ -0.35
NOTCH4-201ENST00000375023 HCP5Q6MZN7 132 aa12.86□□□□□ -0.35
NOTCH4-201ENST00000375023 ZIC3O60481 467 aa12.86□□□□□ -0.35
NOTCH4-201ENST00000375023 INHBBP09529 407 aa12.86□□□□□ -0.35
NOTCH4-201ENST00000375023 PEBP1P30086 187 aaKnown RBP12.86□□□□□ -0.35
NOTCH4-201ENST00000375023 IQCJQ1A5X6 159 aa12.86□□□□□ -0.35
NOTCH4-201ENST00000375023 ALS2Q96Q42 1657 aa12.86□□□□□ -0.35
NOTCH4-201ENST00000375023 ANXA10Q9UJ72 324 aa12.86□□□□□ -0.35
NOTCH4-201ENST00000375023 SYNGR2O43760 224 aa12.86□□□□□ -0.35
NOTCH4-201ENST00000375023 ZP3P21754 424 aa12.86□□□□□ -0.35
NOTCH4-201ENST00000375023 RCC2Q9P258 522 aaKnown RBP12.86□□□□□ -0.35
NOTCH4-201ENST00000375023 ANKRD20A5PA0PJZ0 165 aa12.86□□□□□ -0.35
NOTCH4-201ENST00000375023 IER3P46695 156 aa12.86□□□□□ -0.35
NOTCH4-201ENST00000375023 RPL24P83731 157 aaKnown RBP12.86□□□□□ -0.35
NOTCH4-201ENST00000375023 RFLNBQ8N5W9 214 aa12.86□□□□□ -0.35
NOTCH4-201ENST00000375023 C10orf111Q8N326 155 aa12.85□□□□□ -0.35
NOTCH4-201ENST00000375023 OR8G5Q8NG78 346 aa12.85□□□□□ -0.35
NOTCH4-201ENST00000375023 Q8WTZ3 238 aa12.85□□□□□ -0.35
NOTCH4-201ENST00000375023 HIST3H3Q16695 136 aa12.85□□□□□ -0.35
NOTCH4-201ENST00000375023 ZNF826PQ6ZT77 177 aa12.85□□□□□ -0.35
NOTCH4-201ENST00000375023 ATG4DQ86TL0 474 aaPredicted RBP12.85□□□□□ -0.35
NOTCH4-201ENST00000375023 ADAT3Q96EY9 351 aaPredicted RBP12.85□□□□□ -0.35
NOTCH4-201ENST00000375023 FUT9Q9Y231 359 aa12.85□□□□□ -0.35
NOTCH4-201ENST00000375023 CLDN34H7C241 214 aa12.85□□□□□ -0.35
NOTCH4-201ENST00000375023 RCC1P18754 421 aaPredicted RBP12.85□□□□□ -0.35
NOTCH4-201ENST00000375023 ROM1Q03395 351 aa12.85□□□□□ -0.35
NOTCH4-201ENST00000375023 SGMS2Q8NHU3 365 aa12.85□□□□□ -0.35
NOTCH4-201ENST00000375023 STARD4Q96DR4 205 aa12.85□□□□□ -0.35
NOTCH4-201ENST00000375023 OR10C1Q96KK4 312 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms