RNA–Protein interactions for RNA: ENST00000374730.2

USP48-202, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-202ENST00000374730 AHCTF1Q8WYP5 2266 aa4.07□□□□□ -1.76
USP48-202ENST00000374730 DOCK7Q96N67 2140 aa4.06□□□□□ -1.76
USP48-202ENST00000374730 ZNF816-ZNF321PA0A0X1KG74 233 aa4.06□□□□□ -1.76
USP48-202ENST00000374730 LNP1A1A4G5 178 aa4.06□□□□□ -1.76
USP48-202ENST00000374730 PINLYPA6NC86 204 aa4.06□□□□□ -1.76
USP48-202ENST00000374730 F8VVB4 439 aa4.06□□□□□ -1.76
USP48-202ENST00000374730 F8VWA3 439 aa4.06□□□□□ -1.76
USP48-202ENST00000374730 RPL36A-HNRNPH2H7BZ11 118 aa4.06□□□□□ -1.76
USP48-202ENST00000374730 TRAPPC6AO75865 159 aa4.06□□□□□ -1.76
USP48-202ENST00000374730 FARS2O95363 451 aaKnown RBP4.06□□□□□ -1.76
USP48-202ENST00000374730 SERPINA5P05154 406 aa4.06□□□□□ -1.76
USP48-202ENST00000374730 CTSDP07339 412 aaPredicted RBP4.06□□□□□ -1.76
USP48-202ENST00000374730 B4GALT1P15291 398 aa4.06□□□□□ -1.76
USP48-202ENST00000374730 ZNF708P17019 499 aa4.06□□□□□ -1.76
USP48-202ENST00000374730 AKR1C4P17516 323 aa4.06□□□□□ -1.76
USP48-202ENST00000374730 GNLYP22749 145 aa4.06□□□□□ -1.76
USP48-202ENST00000374730 CHATP28329 748 aa4.06□□□□□ -1.76
USP48-202ENST00000374730 AVPR2P30518 371 aa4.06□□□□□ -1.76
USP48-202ENST00000374730 PTGER4P35408 488 aa4.06□□□□□ -1.76
USP48-202ENST00000374730 NUP62P37198 522 aaPredicted RBP4.06□□□□□ -1.76
USP48-202ENST00000374730 RBP2P50120 134 aa4.06□□□□□ -1.76
USP48-202ENST00000374730 NPY4RP50391 375 aa4.06□□□□□ -1.76
USP48-202ENST00000374730 LHX2P50458 406 aa4.06□□□□□ -1.76
USP48-202ENST00000374730 LUMP51884 338 aaPredicted RBP4.06□□□□□ -1.76
USP48-202ENST00000374730 FUT6P51993 359 aa4.06□□□□□ -1.76
USP48-202ENST00000374730 MTCP1P56278 107 aa4.06□□□□□ -1.76
USP48-202ENST00000374730 CLDN18P56856 261 aa4.06□□□□□ -1.76
USP48-202ENST00000374730 SUPT4H1P63272 117 aaKnown RBP4.06□□□□□ -1.76
USP48-202ENST00000374730 FAM3AP98173 230 aa4.06□□□□□ -1.76
USP48-202ENST00000374730 PSG4Q00888 419 aa4.06□□□□□ -1.76
USP48-202ENST00000374730 NAAAQ02083 359 aa4.06□□□□□ -1.76
USP48-202ENST00000374730 CEACAM16Q2WEN9 425 aa4.06□□□□□ -1.76
USP48-202ENST00000374730 CHRFAM7AQ494W8 412 aa4.06□□□□□ -1.76
USP48-202ENST00000374730 TCEAL6Q6IPX3 200 aa4.06□□□□□ -1.76
USP48-202ENST00000374730 PRSS54Q6PEW0 395 aa4.06□□□□□ -1.76
USP48-202ENST00000374730 TRAT1Q6PIZ9 186 aa4.06□□□□□ -1.76
USP48-202ENST00000374730 CLEC18BQ6UXF7 455 aa4.06□□□□□ -1.76
USP48-202ENST00000374730 RBPMS2Q6ZRY4 209 aaKnown RBP4.06□□□□□ -1.76
USP48-202ENST00000374730 Q6ZSV7 163 aa4.06□□□□□ -1.76
USP48-202ENST00000374730 KCTD9Q7L273 389 aa4.06□□□□□ -1.76
USP48-202ENST00000374730 SKA3Q8IX90 412 aa4.06□□□□□ -1.76
USP48-202ENST00000374730 ZSCAN4Q8NAM6 433 aaPredicted RBP4.06□□□□□ -1.76
USP48-202ENST00000374730 INO80EQ8NBZ0 244 aaPredicted RBP4.06□□□□□ -1.76
USP48-202ENST00000374730 OR2M7Q8NG81 312 aa4.06□□□□□ -1.76
USP48-202ENST00000374730 OR10K1Q8NGX5 313 aa4.06□□□□□ -1.76
USP48-202ENST00000374730 OR2AE1Q8NHA4 323 aa4.06□□□□□ -1.76
USP48-202ENST00000374730 AKR7LQ8NHP1 331 aa4.06□□□□□ -1.76
USP48-202ENST00000374730 NPRL2Q8WTW4 380 aa4.06□□□□□ -1.76
USP48-202ENST00000374730 CASTOR1Q8WTX7 329 aa4.06□□□□□ -1.76
USP48-202ENST00000374730 ROBO4Q8WZ75 1007 aa4.06□□□□□ -1.76
USP48-202ENST00000374730 TCEAL3Q969E4 200 aa4.06□□□□□ -1.76
USP48-202ENST00000374730 SAT2Q96F10 170 aaPredicted RBP4.06□□□□□ -1.76
USP48-202ENST00000374730 BORCS8Q96FH0 119 aa4.06□□□□□ -1.76
USP48-202ENST00000374730 SEC22AQ96IW7 307 aa4.06□□□□□ -1.76
USP48-202ENST00000374730 IP6K3Q96PC2 410 aa4.06□□□□□ -1.76
USP48-202ENST00000374730 AQP10Q96PS8 301 aa4.06□□□□□ -1.76
USP48-202ENST00000374730 C1QTNF5Q9BXJ0 243 aa4.06□□□□□ -1.76
USP48-202ENST00000374730 SHARPINQ9H0F6 387 aa4.06□□□□□ -1.76
USP48-202ENST00000374730 WDR13Q9H1Z4 485 aa4.06□□□□□ -1.76
USP48-202ENST00000374730 OPA3Q9H6K4 179 aa4.06□□□□□ -1.76
USP48-202ENST00000374730 ELL3Q9HB65 397 aaPredicted RBP4.06□□□□□ -1.76
USP48-202ENST00000374730 CHMP1AQ9HD42 196 aaPredicted RBP4.06□□□□□ -1.76
USP48-202ENST00000374730 ABI3Q9P2A4 366 aa4.06□□□□□ -1.76
USP48-202ENST00000374730 MBD2Q9UBB5 411 aa4.06□□□□□ -1.76
USP48-202ENST00000374730 GLS2Q9UI32 602 aa4.06□□□□□ -1.76
USP48-202ENST00000374730 ANXA10Q9UJ72 324 aa4.06□□□□□ -1.76
USP48-202ENST00000374730 MCTS1Q9ULC4 181 aaKnown RBP4.06□□□□□ -1.76
USP48-202ENST00000374730 C14orf166Q9Y224 244 aaKnown RBP4.06□□□□□ -1.76
USP48-202ENST00000374730 DNAJC13O75165 2243 aa4.06□□□□□ -1.76
USP48-202ENST00000374730 MED13Q9UHV7 2174 aa4.06□□□□□ -1.76
USP48-202ENST00000374730 FREM2Q5SZK8 3169 aa4.06□□□□□ -1.76
USP48-202ENST00000374730 WDFY4Q6ZS81 3184 aa4.06□□□□□ -1.76
USP48-202ENST00000374730 ZNF407Q9C0G0 2248 aa4.05□□□□□ -1.76
USP48-202ENST00000374730 IGKV1-27A0A075B6S5 117 aa4.05□□□□□ -1.76
USP48-202ENST00000374730 IGKV1D-8A0A087WSZ0 117 aa4.05□□□□□ -1.76
USP48-202ENST00000374730 A0A0U1RQK1 487 aa4.05□□□□□ -1.76
USP48-202ENST00000374730 ZNF320A2RRD8 509 aa4.05□□□□□ -1.76
USP48-202ENST00000374730 C5orf51A6NDU8 294 aa4.05□□□□□ -1.76
USP48-202ENST00000374730 CRYM-AS1A6NIL9 109 aa4.05□□□□□ -1.76
USP48-202ENST00000374730 ZSCAN5BA6NJL1 495 aa4.05□□□□□ -1.76
USP48-202ENST00000374730 ZNF724A8MTY0 619 aa4.05□□□□□ -1.76
USP48-202ENST00000374730 FAM25EA8MYX2 175 aa4.05□□□□□ -1.76
USP48-202ENST00000374730 EEF1E1-BLOC1S5C9J1V9 151 aa4.05□□□□□ -1.76
USP48-202ENST00000374730 M0R296 226 aa4.05□□□□□ -1.76
USP48-202ENST00000374730 BET1O15155 118 aa4.05□□□□□ -1.76
USP48-202ENST00000374730 FGF16O43320 207 aa4.05□□□□□ -1.76
USP48-202ENST00000374730 SS18L1O75177 396 aaPredicted RBP4.05□□□□□ -1.76
USP48-202ENST00000374730 MRPL33O75394 65 aaKnown RBP4.05□□□□□ -1.76
USP48-202ENST00000374730 SYNGR4O95473 234 aa4.05□□□□□ -1.76
USP48-202ENST00000374730 NRASP01111 189 aa4.05□□□□□ -1.76
USP48-202ENST00000374730 PRSS2P07478 247 aa4.05□□□□□ -1.76
USP48-202ENST00000374730 FCGR3AP08637 254 aa4.05□□□□□ -1.76
USP48-202ENST00000374730 SP9P0CG40 484 aa4.05□□□□□ -1.76
USP48-202ENST00000374730 PET100P0DJ07 73 aa4.05□□□□□ -1.76
USP48-202ENST00000374730 TPT1P13693 172 aaKnown RBP4.05□□□□□ -1.76
USP48-202ENST00000374730 CD59P13987 128 aa4.05□□□□□ -1.76
USP48-202ENST00000374730 GABRR1P24046 479 aa4.05□□□□□ -1.76
USP48-202ENST00000374730 STARP49675 285 aa4.05□□□□□ -1.76
USP48-202ENST00000374730 MFAP4P55083 255 aa4.05□□□□□ -1.76
USP48-202ENST00000374730 PPIAP62937 165 aaKnown RBP4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms